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LOCUS XM_059368019 3747 bp mRNA linear INV 02-SEP-2023 transporter 1 (LOC106084108), mRNA. ACCESSION XM_059368019 VERSION XM_059368019.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3747 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3747 /gene="LOC106084108" /note="high affinity cationic amino acid transporter 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106084108" CDS 744..3101 /gene="LOC106084108" /codon_start=1 /product="high affinity cationic amino acid transporter 1" /protein_id="XP_059224002.1" /db_xref="GeneID:106084108" /translation="MKPSELLTVLERVKIKVPLPPGVSTSTLLPKLIRTKDVKQLQDG TTQPSKPKLTKCLNTLDLTSLGIGSCCGTGMYLVAGMVAKNIAGPGVVISFVIAALAS IFSGACYAEFGVRVPHTSGSAYMYSYVAVGEFVAFVIGWNMILEYLIGTSACACALSS SFDSLTGGAISSTIGETVGTIFGKPPDFIAFGITLIMTMVLALGASKSVIFNHSLNAI NLATWVFVMTAGLFYVDTSTWTEHQGFLPYGWSGVFSGAATCFYAFIGFDIIATTGEE AHNPQKSIPKAIMGSLVVVLLAYVTVSLVLTLVVPYDHINTGAALVQMWTYVNAPKCR AIVAIGATAGLSVAMFGSMFPMPRVIYAMAQDGLIFRQLSQLWQRTNVPGLATIGSGI AAALVALSVRLEILVEMMSIGTLLAYTLVSTCVLILRYQPHSTSLIELLPAQLRTPLA PGASTDPRGTTAEVLESNKLTIKRVTRGMSDSDDSFIDESPEGYLGRDDQFLVSDRSE NKFYGAVHGAPTGPTGQANAFDTMGLNFVSRKIHEYSYLCPGFFPWINPGQATSESGM YVTKLVGIMFGLIFFLDLFAAIGWSGGFAAFIYFILIIGIFVILLIISRQPQNRYALA FLTPGLPFIPAIAIAVNIYLIFKLSILTLVRFTIWMSVGLVMYFYYGITHSSLEQASD DMELRVDKDYSKNVEEKAVWDQPSYMNQNHEPVWASQDNNTTKPNKQTTTKPASNYST KTQDSTKSNTHNTSSARNPAIGQTSGNTGTFSMFVDETEFPTWDD" polyA_site 3747 /gene="LOC106084108" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtgaattcac cacttcacat aacgcaagtg aaaaacggat acaaacaaca ttaagattaa 61 ataaaaaaat tggctaaaat ctcataaagt aaaaaagtga aataattttt tttttgagga 121 aaattgtaaa aaataataaa agaaatttga aaaaagaaaa attaaataca tagaaacaag 181 tgaagtgctt ttggaaaaag aataaaaagc ctaagaaaaa aatatcatga ttaataaccc 241 aactcattta accaaaaaag ttaatagctg ggcaagttga agcaaaaggc ttgaaaaaaa 301 aaattttggg aattaagaaa attaaaataa aataaattaa attctatagc taaaaaagga 361 aatgttcaaa atttggtgtc taaactgttg aatattcagc acattgtctt caccccttac 421 taaaggactt tttggctggg tgtgtgagaa catgagtgca aatttaagtg tctgtatcat 481 gtaaatgaaa agatatgaaa aaaaatttgt tgattaaaac agtataggtg gagtaaaaat 541 tttctagttt taagttaata aaacaaaaat actgtacgaa ttggaaacct tcataccaag 601 aaaaaaaaac cagaaacaac ccaagttata ccttttaaac gcccgaggcc aacaattgtc 661 aatcctctaa gacatctccc gcaaagacag acagccagcc agccagccaa ttgtgtttgg 721 ataccaagaa caacaaaaac aaaatgaaac cttcagagct gttaaccgtt ttggaaaggg 781 tcaaaatcaa agttccctta ccacctggag tgtccacttc tacgctgctg ccaaagttaa 841 tacgtaccaa ggatgttaaa caattgcagg acggcacaac acagccttca aagccaaaat 901 taacgaaatg cctgaatacc ttggatctca catcgctggg cattggatcc tgttgcggca 961 ccggcatgta tttggtggcc ggcatggtgg caaagaacat agctggtcct ggtgtggtaa 1021 ttagttttgt tattgctgca ttagctagta tattttcagg ggcctgttat gcagaatttg 1081 gagtgcgtgt accgcatact tccggttcgg cgtatatgta ttcatatgtt gctgttggtg 1141 aatttgtagc atttgttatt ggttggaata tgatattgga atatttaata ggaacaagtg 1201 cctgtgcatg tgcgttaagc tccagttttg attccctaac gggtggtgct atctcatcta 1261 ccataggcga gacagtgggt accatatttg gtaaaccccc tgactttata gcatttggca 1321 taacgttaat aatgaccatg gtattggcat tgggtgccag caaatcggtg atatttaatc 1381 attccttaaa tgccattaat ttggccacct gggtttttgt aatgaccgca ggccttttct 1441 atgtggacac aagtacatgg acagagcatc agggcttttt accctatggc tggagtgggg 1501 tattttcggg agctgccacc tgcttctatg catttattgg cttcgatata atagccacaa 1561 cgggcgagga ggcccataat ccccaaaaaa gtataccaaa agcaataatg ggctcattgg 1621 tggtggtttt gttggcctat gttacagtta gtttagtttt gactttggtg gtgccctatg 1681 accacattaa taccggtgct gccctggtgc aaatgtggac ttatgtgaat gcgcccaagt 1741 gtagggccat agtggcaatt ggtgccactg cgggcttgtc ggtggccatg tttggctcca 1801 tgtttcccat gcctagagtt atatatgcca tggctcagga tggtttgata tttagacaac 1861 tatcacaatt atggcagcgc actaatgtac ctggtttagc aacgattggc agcggcatag 1921 ctgctgccct ggtggcactc tcagtgcgtt tggagattct agtggaaatg atgtccatag 1981 gcactctgct ggcctataca ctggtctcca cctgtgtttt aattttacgc tatcaaccgc 2041 acagtacttc gctcatagaa ctcttgccag cccaactgag aacgccgttg gcgcctgggg 2101 cctccaccga tcccagaggc actaccgcag aagttttgga gtccaacaaa ctcaccatta 2161 agcgagtgac ccgcggcatg tccgactccg atgattcgtt catagatgaa agtcccgaag 2221 gctatttggg tcgtgatgat caatttttgg tatcagatcg ttcagagaat aaattctatg 2281 gggccgtaca tggggcaccc accggtccca ctgggcaagc caatgctttc gataccatgg 2341 gccttaactt tgtctctaga aaaatccatg aatattcgta cctgtgtcct ggcttctttc 2401 cctggatcaa tcccggccaa gccacctcgg aaagtggcat gtatgtgacc aagcttgttg 2461 gcatcatgtt cggtctcata ttcttcttgg atctgtttgc ggccattggc tggtccggtg 2521 gcttcgcagc attcatttat ttcattttaa ttatcggcat atttgtgata ttattaatta 2581 tctcaagaca accacaaaat agatatgcac ttgcgttcct cacccccgga cttccattta 2641 ttccggcaat cgccattgcc gtcaatatct atttaatatt taagttaagc atattaacct 2701 tagttagatt taccatttgg atgtcggtgg gcctggtcat gtacttctac tatggcatta 2761 cgcacagcag cctggagcag gccagcgatg atatggagtt aagggttgac aaggactata 2821 gtaaaaatgt cgaagaaaaa gctgtctggg atcaaccttc ctatatgaac caaaatcatg 2881 agcccgtatg ggctagccaa gataacaaca caacaaaacc caacaagcaa actacaacaa 2941 aacctgcttc aaattattct acgaaaacac aagattcaac aaaaagtaac acacataata 3001 catcaagtgc aagaaatcca gcaattggac aaacaagtgg caacacgggc acattcagta 3061 tgtttgtgga tgaaacagag tttccaacgt gggatgatta aaggcattaa acagagattg 3121 ccaataatcg ttttaagtat taattttcga attaaaaata aaatgcaagc aaaccataac 3181 cgattcctca catacataca caaactaaat ccactaaaat taatagaact aaaccaaaga 3241 gaacaagaaa aagagaaaac aaaacaaatc aaatccatca gagcaatgct taacaaatta 3301 tttccatttt aaaccaaaat agaacataaa gtaaggaaat tgtttgcaat ttttttttgt 3361 cttgtttttt tgaagttttt ttaatataaa atgtaaataa tcataactag tttcatacac 3421 tacacatatt attcacctag aatatgtata tatacataaa ttgagaaaaa taagttttag 3481 ataacatagt ttggtcgcat ctatttattt tgccttaaat tttcttacaa ttataaaaaa 3541 aaaaaccaat gtcacttttt tgaattcgta gcagattatg acaaacaaaa gatggaccta 3601 cccttatgta caaccaattc ccatggctga ataatagaaa gttatgtcac ttgccagaaa 3661 caaaatgtgg aaagacccca tgaacattga taatgtccaa atgtaccaaa taaaaattta 3721 ataaatgaag aaaacgtaaa cacagaa