PREDICTED: Stomoxys calcitrans serine--tRNA ligase, mitochondrial

LOCUS       XM_059368001            1656 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106084534), transcript variant X1, mRNA.
ACCESSION   XM_059368001
VERSION     XM_059368001.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1656
                     /gene="LOC106084534"
                     /note="serine--tRNA ligase, mitochondrial; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:106084534"
     CDS             297..1649
                     /gene="LOC106084534"
                     /codon_start=1
                     /product="serine--tRNA ligase, mitochondrial isoform X1"
                     /protein_id="XP_059223984.1"
                     /db_xref="GeneID:106084534"
                     /translation="MEVLRKIGNSYAARRQQDHPVLCNWSIALVIPTPRCAKIQRFNL
                     MKIPLRSFCAKPVCAIISEDLHHYGSTSNLDKMEQNVLLRKGSNNIPVIRELIKKLDM
                     KNDSDVAKLKGELSKLPNLTHPRIVNYGDEPKELEQFSPSDSFPTHATEFSEVAKYMN
                     IFRMDHLGNYTGHKSYYLFGKLAELEQAIKEYTVQQLLQNNFSLISVPDILPKEVIEG
                     CGMNTDGERTQVYKLDSGLCLSGTSEMALAGFFENQVLEEKQLPIKVAAVSRCYRAET
                     SGLNEEKGIYRVHQFTKVEMFAICAESQSEDVLELFKDLQLENFKKLNLKIRLLDMPP
                     SELGAPAYQKYDIEAWMPGRKVWGEISSSSNCTDYQAKRLNIRYKTNKGETKFAHTVN
                     GTAAAIPRLLIAILESNQVDKNSIEIPKVLGEYMKNCSITKDKLIPEIKLLKHLKHDI
                     "
     polyA_site      1656
                     /gene="LOC106084534"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aatggaccca aaattaaatg agtttaaaac gttgaactac aatcaagaat tacactcctt
       61 cgagcagttg acaatttgtc tttagcccaa tgctcgaatc tggtgctgac tccatacaaa
      121 tcgtatgaag acatctttcg agtgcctttt cctgccatta aataaagctc ggagtcgata
      181 ttccaaaata caaatcaaat ttttattgcc acctttatat atttaaagac gtccttcact
      241 ggatttatat ttgctccgga agtcaaatgc gagtattcat atatcactaa acggatatgg
      301 aagtgctcag gaaaatcgga aatagctatg ccgcccgtag acagcaagat catcctgttt
      361 tgtgcaattg gtcaatagca cttgtgatcc ctacacccag atgtgcaaaa attcaaaggt
      421 ttaatcttat gaaaataccc ctgcgttctt tctgtgccaa acctgtttgt gccataatat
      481 ctgaagattt acatcattat ggatctacct ctaatttgga caaaatggaa cagaacgtct
      541 tgctgcgaaa gggctccaat aatataccag taatacgaga gttaataaag aaattggata
      601 tgaaaaacga ctctgacgtt gcaaaactaa agggggagct gtcaaaactg cccaatctta
      661 cacatcctag aattgtgaat tatggggatg aacctaagga actggagcaa ttctctccct
      721 ctgattcttt tcccactcat gctactgagt tttctgaagt agcaaagtat atgaatatct
      781 tccgcatgga ccatttgggt aattatacgg gacacaaaag ttattacttg tttggaaaat
      841 tggctgaact agaacaagct ataaaggagt acacagttca acaattgttg caaaataatt
      901 tttctttaat ctctgttcct gatattctgc ctaaggaggt catagaggga tgtggcatga
      961 ataccgatgg tgaaaggaca caagtttaca aacttgattc tggattgtgc ttgtctggca
     1021 cttctgagat ggctttggct ggtttcttcg aaaatcaagt attagaagaa aagcaactgc
     1081 caattaaagt ggctgctgta agccgttgtt atagagcaga aacgtcggga ttaaacgagg
     1141 aaaagggtat atatagggta catcaattta caaaagttga aatgtttgcg atatgtgccg
     1201 aaagtcaatc agaagatgtt ctggaactct tcaaggatct gcaactggaa aattttaaga
     1261 agttaaactt aaaaatacgt ctattagata tgccaccatc agaattgggt gctccagcct
     1321 atcaaaaata tgacatagaa gcttggatgc caggcagaaa agtttgggga gaaatttcta
     1381 gcagtagtaa ctgcactgat taccaagcaa aacgactcaa tataagatat aaaaccaata
     1441 agggtgagac caaatttgcc catacagtaa atggaacagc agctgccata cctagattat
     1501 tgatagcaat acttgaatca aaccaggttg ataaaaattc aattgagatt cctaaagtac
     1561 ttggtgaata catgaagaat tgtagcatta caaaagataa attgatacca gaaataaaat
     1621 tgttaaagca tttaaagcat gatatttaaa gaaaca