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PREDICTED: Stomoxys calcitrans stomatin (LOC106087403), transcript


LOCUS       XM_059367930            2287 bp    mRNA    linear   INV 02-SEP-2023
            variant X1, mRNA.
ACCESSION   XM_059367930
VERSION     XM_059367930.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2287
                     /gene="LOC106087403"
                     /note="stomatin; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:106087403"
     CDS             569..1522
                     /gene="LOC106087403"
                     /codon_start=1
                     /product="stomatin isoform X1"
                     /protein_id="XP_059223913.1"
                     /db_xref="GeneID:106087403"
                     /translation="MERSSFPDRPQSLGRQIRTSDTQPIFSENALIFLAYILLFVTFP
                     LTIWFCLETVAHYQRIVIFRLGRLRKGGVAGPGLVFILPCVDEFVKVDLRTQSFDVHP
                     QEVLTRDSVTIQVDAVVYYSVRNPLDAVIQIRNVHESTKLLAQTTLRNVVGTKNLMEL
                     LTAKESLSRTIGGILDEATDPWGVKVERVEIKQIHLPRRLQRAMAIEREAEREAQAKL
                     VAAHGELEASINLKEASDVMKENPMALQLRYLQTLNTISNENNHTIIFPLPTKMIRKI
                     ITNCSKAMEKANCCNDPNSCTLTSVSNKKIQTNPEKQDTGV"
     polyA_site      2287
                     /gene="LOC106087403"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atcaaagttg atgcgatcta atggtggatt tggttgcgac gcggattcta cttgtaggcg
       61 atcctggagt tgtcgatcgt ctttctaaag gggatctttg ggacaggcta aacgcagtcg
      121 tgagtagcag taactatata ttaaaatgtg ggggtttttt agaatctaga aacagtcact
      181 tttcgattga tgatattgat cttcatttca catgcttgga gtaccccttt atcctatctt
      241 aattttcaac acccacatct gtcattgcat cgtagattat gcgtgcagac atggtcatta
      301 tgtcagtcca agctcaacaa ggaaatgaat acctcgctat accttgggaa agatttatat
      361 tgacttattg cccgttaaac tgttaaagaa atgcaatggt aaaggctact tgcattttct
      421 caaaggttct acttatgcct gcaggccatg gccccaccac caaccacccc ccacccgaat
      481 tgaagtttta tcgtgcgaac gttcactgtt aaagtcatga cattgatggt agcatttaat
      541 gaagtaaaag aacaaattta ttgttaaaat ggagagatca tcatttccag ataggccaca
      601 atcactggga cgacaaattc gcacatcgga tacccagcca atattttcgg agaatgccct
      661 tatatttctt gcctatattt tactctttgt tacatttccc cttaccatat ggttttgtct
      721 agaaacagtg gcacactatc aaagaattgt aatatttcgc ttgggacgtt tgagaaaggg
      781 tggtgttgct ggtcccggtc tcgtttttat acttccctgt gttgatgagt ttgtcaaagt
      841 ggatttgcgt acacaatctt tcgatgtaca tccccaagag gttttgactc gtgactctgt
      901 taccatacaa gttgatgctg tggtctacta cagtgtacga aatcctttgg atgctgtaat
      961 acaaattaga aatgtacatg agtcgaccaa actactggcc cagactacgc ttagaaatgt
     1021 tgtgggtacc aagaatttaa tggaactttt gactgccaaa gagtccttgt cgcgtacaat
     1081 tggaggtatt ctagatgaag caactgatcc atggggtgtc aaagtggaaa gagtggaaat
     1141 caaacaaatt cacttgccaa gacgcttaca aagagctatg gccatcgaaa gagaagctga
     1201 acgcgaagcc caagctaaac ttgttgctgc tcatggggaa ttggaggctt cgataaatct
     1261 aaaagaagct tcagatgtta tgaaagaaaa tcctatggcg ttgcagcttc gctatttaca
     1321 aactttgaat accatttcga atgaaaataa tcacactatc atttttccgc tacccactaa
     1381 gatgataagg aagataatta caaattgttc aaaagcaatg gaaaaggcaa attgttgcaa
     1441 tgatcccaat tcttgtaccc tcacatcagt gtccaataaa aagattcaaa caaaccccga
     1501 aaaacaagac actggagttt aaaattgaaa tgccttgtat aacaaaatcg tttattcaaa
     1561 aagtctgtct tctatataat caacaatcaa acaaatttaa gaaaatttta tgataaattt
     1621 caatgccacg cacaaagact tcagccttga ggaattcatt gttgtcatgt aacaaaaccg
     1681 gggtattatt cataggagag aaaccaatcg agggtatgcc aatggcacgc aagaattgac
     1741 tatcagtgcc gccagcagac atgagtatcc agtttaagat ccctaaacaa gaacgaaaca
     1801 taaattttgg gcagtgaagt gatgacttgt ccccacacca gggtgcccag accaaagaat
     1861 atgcaccaca accattgatc gagggagaga gcttttgtgg agaaggccat tttgccaaat
     1921 tgcacaataa cgacctagaa atgagtaaag agaaaacagt taataataga aaaaaaaaac
     1981 aaattttaag agtcgctatc cctctctacg tttttccatg caaatcagtt ctttgtttgg
     2041 ttggtgttac caaccctgtt ggttttcaac ctacctgtga tacaacggtg gcaatccaaa
     2101 tgctatagaa gatgggatta gtaaagaatc cttcgaggac attacgctgt ccatggattt
     2161 tgcgagcatt gatttcatta aacaaagtca tcatgacaaa tgtattaaaa ataatggtga
     2221 aatgttgtgt gggaccagcc gacaagggtt ggccacgacc cgattcaata tccaaaatcc
     2281 aatcacc