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LOCUS XM_059367925 4178 bp mRNA linear INV 02-SEP-2023 ATPase 1 (LOC106087410), transcript variant X4, mRNA. ACCESSION XM_059367925 VERSION XM_059367925.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4178 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4178 /gene="LOC106087410" /note="plasma membrane calcium-transporting ATPase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:106087410" CDS 735..3818 /gene="LOC106087410" /codon_start=1 /product="plasma membrane calcium-transporting ATPase 1 isoform X2" /protein_id="XP_059223908.1" /db_xref="GeneID:106087410" /translation="MATIDGRPAQYGISLRQLRDLMEHRGREGVHLVDEMGGVNEICK KLYTSPNEGLSGSKTDIEHRRETFGSNSIPPKPPKTFLTLVWEALQDVTLIILEVAAI VSLILSFYKPADEEAPLLEEEDDHYGWIEGLAILISVIVVVLVTAFNDYSKERQFRGL QNRIEGEHKFSVIRGGEVCQISVTDIVVGDIAQVKYGDLLPADGVLIQSNDLKVDESS LTGESDHVKKGVEFDPMVLSGTHVMEGSGKMVVTAVGVNSQSGIILTLLGATDEESHK KKLKKDGIKSETEGNHVASNAGAGAAEGDQKKEKSVLQSKLTKLAIQIGYAGSTIAVL TVIILVIQFCVKTFVIEEKPWKNTYANHFVKHLIIGVTVLVVAVPEGLPLAVTLSLAY SVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKLCKVLPKY NDIPQTVANLITQGISVNSAYTSSIMPGPSADDLPTQVGNKTECALLGFVMGLGVKYQ SIRDEITEDKFTRVYTFNSVRKSMGTVIPRSNGGYRLFSKGASEIMLGKCSYIFGHNG VLERFTPDMQERLIREVIEPMACDGLRTICIAYRDFVHGKAAMNEVSIDREPNWDDEA GIMSNLTCLCVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARSIATKCGILK PGDEFLILEGKEFNRRIRDSNGNIQQSLIDKVWPRLRVLARSSPTDKYNLVKGIIDST VSDNREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAV MWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASL ALATEMPTPDLLLRKPYGRTKPLISGTMLKNILGQAFYQLIIIFGLLFVGDWILDIES GRGQPLSAGPTQHFTIIFNTFVMMTLFNEINARKIHGQRNVLEGFFTNPIFYSIWIAT VVSQVVIVQFGKMAFSTKALSLDQWLWCIFFGLGTLVWGQVITSLPTKRFEKMVS" polyA_site 4178 /gene="LOC106087410" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgctggcctg ctctcagttt tcgctgtgcg attgctggta atgtggtgtc tatatctagt 61 atcgtgaaca atttcattag tacaggcgga cgtaacggta acggacgtaa cgtacgtcgt 121 tggaaaaaaa agctacagac taaagaaaga aggttgtgaa aaaaattttt tgtgtagaaa 181 ttcgtaaact tctacaacaa aaagtgtaat ttttttttgt tgtttaaaga aagtgccgtt 241 agctagacgc caaatatgca ataacattca atttcgttta gaaatccaaa cggtagagaa 301 acagaaacac tcaaggtgtt tttttcgggt acgtgcgtgt gtgtgtttgt gtacggtggc 361 gacaacggca acgagaacga cgacgacgac tacgactact agtaggacgg tataaaaaga 421 caccgaggcg cggggagcca acagcaacac ataccaaata ctattgccgc ctcattcctc 481 cccccggtct tatacataca tacaacaaat tcaagaggag gcaggcaaca cagagcaagc 541 accaccagag gaaagacatc aagccatcca agcactacgc cagtagtgcg cgcacacatc 601 accacagcag cacacagctc tctgtgttct gtcagctgtg tgtgctcccc acatcggaac 661 agctgtttgg agtagccaaa gccattgtgt tttagtgtat agtagtgtgg tgagagagtg 721 tagagattta acaaatggcc accatagatg gacgacccgc acaatatggg atatcactta 781 ggcaattacg tgacctcatg gaacaccgag gtcgcgaagg tgttcatctc gtagacgaaa 841 tgggcggtgt caacgaaata tgtaaaaaat tatacacttc ccctaacgaa ggtttaagtg 901 gatcgaaaac cgacatcgaa catagacgag aaacttttgg ctcgaatagt ataccaccga 961 aacctccgaa aacattttta actctagtct gggaagcatt acaagatgtg acccttatta 1021 ttttagaagt agctgcgata gtctcattga ttctatcctt ttataagccc gccgatgaag 1081 aagctccact tttggaagaa gaagatgatc actatggctg gattgaaggt ttagccattc 1141 ttatatcggt cattgtggtt gttctggtga cagcattcaa tgattactcc aaagagcgcc 1201 aatttcgtgg tctgcagaat cgcattgagg gcgaacacaa gttctcggtt attcgaggcg 1261 gtgaggtatg ccaaatatcg gtaacagaca tagtggtggg tgatatagct caggtcaaat 1321 atggtgatct attgccagcc gatggtgtac tcatacaaag taatgactta aaggtggatg 1381 aatcgtcgtt gaccggcgaa tcggatcatg tgaaaaaggg tgtagaattt gatcccatgg 1441 tcttgtcggg cacccatgtc atggaaggca gtggtaaaat ggtggtcacc gccgttggtg 1501 tcaactctca atctggtatt attctcactc ttttgggcgc caccgatgaa gagtcccata 1561 aaaagaaatt gaaaaaagat ggcattaagt ctgaaactga aggtaatcat gttgctagca 1621 acgctggggc aggcgctgcc gaaggggatc aaaagaaaga gaagtctgtc ttgcaatcga 1681 aactcaccaa attggccata cagattggtt atgctggctc caccattgcc gtgctgacgg 1741 tcatcatttt ggtcatacaa ttctgtgtta agacattcgt tatcgaggag aaaccctgga 1801 agaataccta tgccaatcat tttgttaagc atttgattat cggtgtaacc gtattggttg 1861 tagctgtacc tgaaggtttg ccgttagctg ttaccctatc gttggcctat tcggtgaaga 1921 aaatgatgaa agataataat ttggtacgcc atttggatgc ctgcgagacc atgggtaatg 1981 ccactgccat ttgctccgat aagactggta ccttgactac aaatcgcatg acagttgtcc 2041 aatcgtacat ttgcgaaaag ctatgcaaag tcctgccgaa atacaacgac atccctcaaa 2101 ctgtggcgaa tttgattacc caaggtatat cggtcaattc tgcctatacg tccagtatta 2161 tgcccggtcc ctcggctgat gatttaccca cacaagtggg caataaaacg gaatgtgccc 2221 ttttgggctt tgtcatgggc ttgggtgtga aatatcagtc catacgtgat gagatcaccg 2281 aagataaatt tactcgtgta tatacattca attctgtgcg caagagcatg ggtaccgtga 2341 ttcctagaag caatggtggc tatcgtctat ttagtaaagg tgcttccgaa attatgttgg 2401 gaaaatgtag ctacattttt ggccacaatg gtgtactgga aagatttaca cccgacatgc 2461 aagaacgtct catacgcgaa gtcattgagc ccatggcttg tgacggtttg cgtaccattt 2521 gtattgccta tcgtgacttt gtccatggca aagctgccat gaacgaagtc tccattgatc 2581 gtgaacccaa ttgggatgac gaggcaggca ttatgtcgaa tctcacttgc ttgtgtgtgg 2641 tgggcattga ggatcccgtg cgtcccgaag tgcccgaggc catacgcaag tgtcaacgtg 2701 ccggtatcac agtgcgcatg gtaaccggtg acaacataaa tacagcacgt tcaattgcca 2761 ccaaatgtgg tatactgaaa cctggcgatg agttccttat attggagggc aaagaattca 2821 atagacgcat tcgtgatagt aatggcaata ttcaacaaag tttgattgac aaggtttggc 2881 ctagattacg tgtattggct cgttcttccc ctacggataa gtacaacctg gtcaaaggta 2941 tcatcgatag tactgtaagt gacaatcgtg aggtggttgc cgtcacgggt gatggtacca 3001 acgatggtcc ggccctcaaa aaggccgatg ttggttttgc catgggtatt gctggcactg 3061 atgttgctaa agaggcttcc gatatcattt tgaccgatga taactttagc agtattgtaa 3121 aggccgttat gtggggtcgt aatgtttacg attcgatttc aaaattcttg cagttccagc 3181 tgacggtaaa tgtggtggct gtcattgtag cctttattgg tgcctgtgct gtgcaagatt 3241 cgccattgaa ggccgttcaa atgttgtggg tcaacttaat tatggacacc ttggcttccc 3301 tggctctggc cacagaaatg cccacaccag atttattgtt gcgcaaaccc tatggtcgta 3361 cgaaaccctt gatttctggt accatgttaa agaatattct gggtcaagct ttttaccaat 3421 tgataatcat ctttggactg ttgtttgttg gtgattggat tttggatatt gaatcgggtc 3481 gtggccaacc cttgtcggct ggtcccacac aacatttcac cattattttt aatacatttg 3541 tcatgatgac tttgtttaat gaaatcaatg ctcgcaaaat ccatggacag cgtaatgtcc 3601 tcgaaggatt ctttactaat cccatcttct atagcatttg gattgccacc gttgtatcac 3661 aggtcgttat tgtgcaattt ggcaaaatgg ccttctccac aaaagctctc tccctcgatc 3721 aatggttgtg gtgcatattc tttggtctgg gcaccctggt gtggggacaa gtcatcactt 3781 cactgcctac aaagagattc gaaaagatgg tctcgtgagc atctccagac taaactcacg 3841 cacaaaataa cttagcaaac taaacaacaa caacagcaac aacagaaaag cgagaaaaac 3901 aacaacaaga gaacgcaaca ttttctttct ggacctgaga atatcacaaa ctaaaaaaaa 3961 aactctaagc aaggaaacaa aaggaaaaaa ttaaaaatct aaaaccagtc ataccccctt 4021 ctctctactc tacattaagc tataacaact acaactacaa caacaaaagc aaaacaaaac 4081 aaaaacaaaa gaaatagtaa aattttttct catcatgtta ttcattaaag caaatgttca 4141 aatgtttaaa tgttcaaata aagtgaattt atttttta