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LOCUS XM_059367923 3834 bp mRNA linear INV 02-SEP-2023 ATPase 1 (LOC106087410), transcript variant X2, mRNA. ACCESSION XM_059367923 VERSION XM_059367923.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3834 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3834 /gene="LOC106087410" /note="plasma membrane calcium-transporting ATPase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins" /db_xref="GeneID:106087410" CDS 310..3474 /gene="LOC106087410" /codon_start=1 /product="plasma membrane calcium-transporting ATPase 1 isoform X1" /protein_id="XP_059223906.1" /db_xref="GeneID:106087410" /translation="MATIDGRPAQYGISLRQLRDLMEHRGREGVHLVDEMGGVNEICK KLYTSPNEGLSGSKTDIEHRRETFGSNSIPPKPPKTFLTLVWEALQDVTLIILEVAAI VSLILSFYKPADEEAPLLEEEDDHYGWIEGLAILISVIVVVLVTAFNDYSKERQFRGL QNRIEGEHKFSVIRGGEVCQISVTDIVVGDIAQVKYGDLLPADGVLIQSNDLKVDESS LTGESDHVKKGVEFDPMVLSGTHVMEGSGKMVVTAVGVNSQSGIILTLLGATDEESHK KKLKKEHEEEIDLEKQAPPPSPPPNKTIPQISDGIKSETEGNHVASNAGAGAAEGDQK KEKSVLQSKLTKLAIQIGYAGSTIAVLTVIILVIQFCVKTFVIEEKPWKNTYANHFVK HLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK TGTLTTNRMTVVQSYICEKLCKVLPKYNDIPQTVANLITQGISVNSAYTSSIMPGPSA DDLPTQVGNKTECALLGFVMGLGVKYQSIRDEITEDKFTRVYTFNSVRKSMGTVIPRS NGGYRLFSKGASEIMLGKCSYIFGHNGVLERFTPDMQERLIREVIEPMACDGLRTICI AYRDFVHGKAAMNEVSIDREPNWDDEAGIMSNLTCLCVVGIEDPVRPEVPEAIRKCQR AGITVRMVTGDNINTARSIATKCGILKPGDEFLILEGKEFNRRIRDSNGNIQQSLIDK VWPRLRVLARSSPTDKYNLVKGIIDSTVSDNREVVAVTGDGTNDGPALKKADVGFAMG IAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG ACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISGTMLKN ILGQAFYQLIIIFGLLFVGDWILDIESGRGQPLSAGPTQHFTIIFNTFVMMTLFNEIN ARKIHGQRNVLEGFFTNPIFYSIWIATVVSQVVIVQFGKMAFSTKALSLDQWLWCIFF GLGTLVWGQVITSLPTKRFEKMVS" polyA_site 3834 /gene="LOC106087410" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caaaaaaaaa aagattgtac ttccacaaca cattgcttgc tgttgggcca acgacgacat 61 accaccacca ccaccacagc attagcagca acataaacgg agagtacagc aacatcagca 121 gcagcagcag gcagcaagaa aacctttcca ccaaggcact gacgtaatat tagtattcag 181 tggaattctt tttgtttata tacaaaaaaa aaaaaaaaca agcaaatacc aagatgtggt 241 gatacttttt gtcatccttg aaacaagcgc ataaaaccca aacacaattc ttagtaaaaa 301 atttaacaaa tggccaccat agatggacga cccgcacaat atgggatatc acttaggcaa 361 ttacgtgacc tcatggaaca ccgaggtcgc gaaggtgttc atctcgtaga cgaaatgggc 421 ggtgtcaacg aaatatgtaa aaaattatac acttccccta acgaaggttt aagtggatcg 481 aaaaccgaca tcgaacatag acgagaaact tttggctcga atagtatacc accgaaacct 541 ccgaaaacat ttttaactct agtctgggaa gcattacaag atgtgaccct tattatttta 601 gaagtagctg cgatagtctc attgattcta tccttttata agcccgccga tgaagaagct 661 ccacttttgg aagaagaaga tgatcactat ggctggattg aaggtttagc cattcttata 721 tcggtcattg tggttgttct ggtgacagca ttcaatgatt actccaaaga gcgccaattt 781 cgtggtctgc agaatcgcat tgagggcgaa cacaagttct cggttattcg aggcggtgag 841 gtatgccaaa tatcggtaac agacatagtg gtgggtgata tagctcaggt caaatatggt 901 gatctattgc cagccgatgg tgtactcata caaagtaatg acttaaaggt ggatgaatcg 961 tcgttgaccg gcgaatcgga tcatgtgaaa aagggtgtag aatttgatcc catggtcttg 1021 tcgggcaccc atgtcatgga aggcagtggt aaaatggtgg tcaccgccgt tggtgtcaac 1081 tctcaatctg gtattattct cactcttttg ggcgccaccg atgaagagtc ccataaaaag 1141 aaattgaaaa aagaacatga agaagaaata gacttggaaa aacaagcacc accaccatca 1201 ccaccaccca acaaaactat tcctcaaatt tcagatggca ttaagtctga aactgaaggt 1261 aatcatgttg ctagcaacgc tggggcaggc gctgccgaag gggatcaaaa gaaagagaag 1321 tctgtcttgc aatcgaaact caccaaattg gccatacaga ttggttatgc tggctccacc 1381 attgccgtgc tgacggtcat cattttggtc atacaattct gtgttaagac attcgttatc 1441 gaggagaaac cctggaagaa tacctatgcc aatcattttg ttaagcattt gattatcggt 1501 gtaaccgtat tggttgtagc tgtacctgaa ggtttgccgt tagctgttac cctatcgttg 1561 gcctattcgg tgaagaaaat gatgaaagat aataatttgg tacgccattt ggatgcctgc 1621 gagaccatgg gtaatgccac tgccatttgc tccgataaga ctggtacctt gactacaaat 1681 cgcatgacag ttgtccaatc gtacatttgc gaaaagctat gcaaagtcct gccgaaatac 1741 aacgacatcc ctcaaactgt ggcgaatttg attacccaag gtatatcggt caattctgcc 1801 tatacgtcca gtattatgcc cggtccctcg gctgatgatt tacccacaca agtgggcaat 1861 aaaacggaat gtgccctttt gggctttgtc atgggcttgg gtgtgaaata tcagtccata 1921 cgtgatgaga tcaccgaaga taaatttact cgtgtatata cattcaattc tgtgcgcaag 1981 agcatgggta ccgtgattcc tagaagcaat ggtggctatc gtctatttag taaaggtgct 2041 tccgaaatta tgttgggaaa atgtagctac atttttggcc acaatggtgt actggaaaga 2101 tttacacccg acatgcaaga acgtctcata cgcgaagtca ttgagcccat ggcttgtgac 2161 ggtttgcgta ccatttgtat tgcctatcgt gactttgtcc atggcaaagc tgccatgaac 2221 gaagtctcca ttgatcgtga acccaattgg gatgacgagg caggcattat gtcgaatctc 2281 acttgcttgt gtgtggtggg cattgaggat cccgtgcgtc ccgaagtgcc cgaggccata 2341 cgcaagtgtc aacgtgccgg tatcacagtg cgcatggtaa ccggtgacaa cataaataca 2401 gcacgttcaa ttgccaccaa atgtggtata ctgaaacctg gcgatgagtt ccttatattg 2461 gagggcaaag aattcaatag acgcattcgt gatagtaatg gcaatattca acaaagtttg 2521 attgacaagg tttggcctag attacgtgta ttggctcgtt cttcccctac ggataagtac 2581 aacctggtca aaggtatcat cgatagtact gtaagtgaca atcgtgaggt ggttgccgtc 2641 acgggtgatg gtaccaacga tggtccggcc ctcaaaaagg ccgatgttgg ttttgccatg 2701 ggtattgctg gcactgatgt tgctaaagag gcttccgata tcattttgac cgatgataac 2761 tttagcagta ttgtaaaggc cgttatgtgg ggtcgtaatg tttacgattc gatttcaaaa 2821 ttcttgcagt tccagctgac ggtaaatgtg gtggctgtca ttgtagcctt tattggtgcc 2881 tgtgctgtgc aagattcgcc attgaaggcc gttcaaatgt tgtgggtcaa cttaattatg 2941 gacaccttgg cttccctggc tctggccaca gaaatgccca caccagattt attgttgcgc 3001 aaaccctatg gtcgtacgaa acccttgatt tctggtacca tgttaaagaa tattctgggt 3061 caagcttttt accaattgat aatcatcttt ggactgttgt ttgttggtga ttggattttg 3121 gatattgaat cgggtcgtgg ccaacccttg tcggctggtc ccacacaaca tttcaccatt 3181 atttttaata catttgtcat gatgactttg tttaatgaaa tcaatgctcg caaaatccat 3241 ggacagcgta atgtcctcga aggattcttt actaatccca tcttctatag catttggatt 3301 gccaccgttg tatcacaggt cgttattgtg caatttggca aaatggcctt ctccacaaaa 3361 gctctctccc tcgatcaatg gttgtggtgc atattctttg gtctgggcac cctggtgtgg 3421 ggacaagtca tcacttcact gcctacaaag agattcgaaa agatggtctc gtgagcatct 3481 ccagactaaa ctcacgcaca aaataactta gcaaactaaa caacaacaac agcaacaaca 3541 gaaaagcgag aaaaacaaca acaagagaac gcaacatttt ctttctggac ctgagaatat 3601 cacaaactaa aaaaaaaact ctaagcaagg aaacaaaagg aaaaaattaa aaatctaaaa 3661 ccagtcatac ccccttctct ctactctaca ttaagctata acaactacaa ctacaacaac 3721 aaaagcaaaa caaaacaaaa acaaaagaaa tagtaaaatt ttttctcatc atgttattca 3781 ttaaagcaaa tgttcaaatg tttaaatgtt caaataaagt gaatttattt ttta