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LOCUS XM_059367922 4259 bp mRNA linear INV 02-SEP-2023 ATPase 1 (LOC106087410), transcript variant X1, mRNA. ACCESSION XM_059367922 VERSION XM_059367922.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4259 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4259 /gene="LOC106087410" /note="plasma membrane calcium-transporting ATPase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins" /db_xref="GeneID:106087410" CDS 735..3899 /gene="LOC106087410" /codon_start=1 /product="plasma membrane calcium-transporting ATPase 1 isoform X1" /protein_id="XP_059223905.1" /db_xref="GeneID:106087410" /translation="MATIDGRPAQYGISLRQLRDLMEHRGREGVHLVDEMGGVNEICK KLYTSPNEGLSGSKTDIEHRRETFGSNSIPPKPPKTFLTLVWEALQDVTLIILEVAAI VSLILSFYKPADEEAPLLEEEDDHYGWIEGLAILISVIVVVLVTAFNDYSKERQFRGL QNRIEGEHKFSVIRGGEVCQISVTDIVVGDIAQVKYGDLLPADGVLIQSNDLKVDESS LTGESDHVKKGVEFDPMVLSGTHVMEGSGKMVVTAVGVNSQSGIILTLLGATDEESHK KKLKKEHEEEIDLEKQAPPPSPPPNKTIPQISDGIKSETEGNHVASNAGAGAAEGDQK KEKSVLQSKLTKLAIQIGYAGSTIAVLTVIILVIQFCVKTFVIEEKPWKNTYANHFVK HLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDK TGTLTTNRMTVVQSYICEKLCKVLPKYNDIPQTVANLITQGISVNSAYTSSIMPGPSA DDLPTQVGNKTECALLGFVMGLGVKYQSIRDEITEDKFTRVYTFNSVRKSMGTVIPRS NGGYRLFSKGASEIMLGKCSYIFGHNGVLERFTPDMQERLIREVIEPMACDGLRTICI AYRDFVHGKAAMNEVSIDREPNWDDEAGIMSNLTCLCVVGIEDPVRPEVPEAIRKCQR AGITVRMVTGDNINTARSIATKCGILKPGDEFLILEGKEFNRRIRDSNGNIQQSLIDK VWPRLRVLARSSPTDKYNLVKGIIDSTVSDNREVVAVTGDGTNDGPALKKADVGFAMG IAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG ACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKPLISGTMLKN ILGQAFYQLIIIFGLLFVGDWILDIESGRGQPLSAGPTQHFTIIFNTFVMMTLFNEIN ARKIHGQRNVLEGFFTNPIFYSIWIATVVSQVVIVQFGKMAFSTKALSLDQWLWCIFF GLGTLVWGQVITSLPTKRFEKMVS" polyA_site 4259 /gene="LOC106087410" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgctggcctg ctctcagttt tcgctgtgcg attgctggta atgtggtgtc tatatctagt 61 atcgtgaaca atttcattag tacaggcgga cgtaacggta acggacgtaa cgtacgtcgt 121 tggaaaaaaa agctacagac taaagaaaga aggttgtgaa aaaaattttt tgtgtagaaa 181 ttcgtaaact tctacaacaa aaagtgtaat ttttttttgt tgtttaaaga aagtgccgtt 241 agctagacgc caaatatgca ataacattca atttcgttta gaaatccaaa cggtagagaa 301 acagaaacac tcaaggtgtt tttttcgggt acgtgcgtgt gtgtgtttgt gtacggtggc 361 gacaacggca acgagaacga cgacgacgac tacgactact agtaggacgg tataaaaaga 421 caccgaggcg cggggagcca acagcaacac ataccaaata ctattgccgc ctcattcctc 481 cccccggtct tatacataca tacaacaaat tcaagaggag gcaggcaaca cagagcaagc 541 accaccagag gaaagacatc aagccatcca agcactacgc cagtagtgcg cgcacacatc 601 accacagcag cacacagctc tctgtgttct gtcagctgtg tgtgctcccc acatcggaac 661 agctgtttgg agtagccaaa gccattgtgt tttagtgtat agtagtgtgg tgagagagtg 721 tagagattta acaaatggcc accatagatg gacgacccgc acaatatggg atatcactta 781 ggcaattacg tgacctcatg gaacaccgag gtcgcgaagg tgttcatctc gtagacgaaa 841 tgggcggtgt caacgaaata tgtaaaaaat tatacacttc ccctaacgaa ggtttaagtg 901 gatcgaaaac cgacatcgaa catagacgag aaacttttgg ctcgaatagt ataccaccga 961 aacctccgaa aacattttta actctagtct gggaagcatt acaagatgtg acccttatta 1021 ttttagaagt agctgcgata gtctcattga ttctatcctt ttataagccc gccgatgaag 1081 aagctccact tttggaagaa gaagatgatc actatggctg gattgaaggt ttagccattc 1141 ttatatcggt cattgtggtt gttctggtga cagcattcaa tgattactcc aaagagcgcc 1201 aatttcgtgg tctgcagaat cgcattgagg gcgaacacaa gttctcggtt attcgaggcg 1261 gtgaggtatg ccaaatatcg gtaacagaca tagtggtggg tgatatagct caggtcaaat 1321 atggtgatct attgccagcc gatggtgtac tcatacaaag taatgactta aaggtggatg 1381 aatcgtcgtt gaccggcgaa tcggatcatg tgaaaaaggg tgtagaattt gatcccatgg 1441 tcttgtcggg cacccatgtc atggaaggca gtggtaaaat ggtggtcacc gccgttggtg 1501 tcaactctca atctggtatt attctcactc ttttgggcgc caccgatgaa gagtcccata 1561 aaaagaaatt gaaaaaagaa catgaagaag aaatagactt ggaaaaacaa gcaccaccac 1621 catcaccacc acccaacaaa actattcctc aaatttcaga tggcattaag tctgaaactg 1681 aaggtaatca tgttgctagc aacgctgggg caggcgctgc cgaaggggat caaaagaaag 1741 agaagtctgt cttgcaatcg aaactcacca aattggccat acagattggt tatgctggct 1801 ccaccattgc cgtgctgacg gtcatcattt tggtcataca attctgtgtt aagacattcg 1861 ttatcgagga gaaaccctgg aagaatacct atgccaatca ttttgttaag catttgatta 1921 tcggtgtaac cgtattggtt gtagctgtac ctgaaggttt gccgttagct gttaccctat 1981 cgttggccta ttcggtgaag aaaatgatga aagataataa tttggtacgc catttggatg 2041 cctgcgagac catgggtaat gccactgcca tttgctccga taagactggt accttgacta 2101 caaatcgcat gacagttgtc caatcgtaca tttgcgaaaa gctatgcaaa gtcctgccga 2161 aatacaacga catccctcaa actgtggcga atttgattac ccaaggtata tcggtcaatt 2221 ctgcctatac gtccagtatt atgcccggtc cctcggctga tgatttaccc acacaagtgg 2281 gcaataaaac ggaatgtgcc cttttgggct ttgtcatggg cttgggtgtg aaatatcagt 2341 ccatacgtga tgagatcacc gaagataaat ttactcgtgt atatacattc aattctgtgc 2401 gcaagagcat gggtaccgtg attcctagaa gcaatggtgg ctatcgtcta tttagtaaag 2461 gtgcttccga aattatgttg ggaaaatgta gctacatttt tggccacaat ggtgtactgg 2521 aaagatttac acccgacatg caagaacgtc tcatacgcga agtcattgag cccatggctt 2581 gtgacggttt gcgtaccatt tgtattgcct atcgtgactt tgtccatggc aaagctgcca 2641 tgaacgaagt ctccattgat cgtgaaccca attgggatga cgaggcaggc attatgtcga 2701 atctcacttg cttgtgtgtg gtgggcattg aggatcccgt gcgtcccgaa gtgcccgagg 2761 ccatacgcaa gtgtcaacgt gccggtatca cagtgcgcat ggtaaccggt gacaacataa 2821 atacagcacg ttcaattgcc accaaatgtg gtatactgaa acctggcgat gagttcctta 2881 tattggaggg caaagaattc aatagacgca ttcgtgatag taatggcaat attcaacaaa 2941 gtttgattga caaggtttgg cctagattac gtgtattggc tcgttcttcc cctacggata 3001 agtacaacct ggtcaaaggt atcatcgata gtactgtaag tgacaatcgt gaggtggttg 3061 ccgtcacggg tgatggtacc aacgatggtc cggccctcaa aaaggccgat gttggttttg 3121 ccatgggtat tgctggcact gatgttgcta aagaggcttc cgatatcatt ttgaccgatg 3181 ataactttag cagtattgta aaggccgtta tgtggggtcg taatgtttac gattcgattt 3241 caaaattctt gcagttccag ctgacggtaa atgtggtggc tgtcattgta gcctttattg 3301 gtgcctgtgc tgtgcaagat tcgccattga aggccgttca aatgttgtgg gtcaacttaa 3361 ttatggacac cttggcttcc ctggctctgg ccacagaaat gcccacacca gatttattgt 3421 tgcgcaaacc ctatggtcgt acgaaaccct tgatttctgg taccatgtta aagaatattc 3481 tgggtcaagc tttttaccaa ttgataatca tctttggact gttgtttgtt ggtgattgga 3541 ttttggatat tgaatcgggt cgtggccaac ccttgtcggc tggtcccaca caacatttca 3601 ccattatttt taatacattt gtcatgatga ctttgtttaa tgaaatcaat gctcgcaaaa 3661 tccatggaca gcgtaatgtc ctcgaaggat tctttactaa tcccatcttc tatagcattt 3721 ggattgccac cgttgtatca caggtcgtta ttgtgcaatt tggcaaaatg gccttctcca 3781 caaaagctct ctccctcgat caatggttgt ggtgcatatt ctttggtctg ggcaccctgg 3841 tgtggggaca agtcatcact tcactgccta caaagagatt cgaaaagatg gtctcgtgag 3901 catctccaga ctaaactcac gcacaaaata acttagcaaa ctaaacaaca acaacagcaa 3961 caacagaaaa gcgagaaaaa caacaacaag agaacgcaac attttctttc tggacctgag 4021 aatatcacaa actaaaaaaa aaactctaag caaggaaaca aaaggaaaaa attaaaaatc 4081 taaaaccagt cataccccct tctctctact ctacattaag ctataacaac tacaactaca 4141 acaacaaaag caaaacaaaa caaaaacaaa agaaatagta aaattttttc tcatcatgtt 4201 attcattaaa gcaaatgttc aaatgtttaa atgttcaaat aaagtgaatt tatttttta