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LOCUS XM_059367919 1300 bp mRNA linear INV 02-SEP-2023 (LOC106093090), transcript variant X2, mRNA. ACCESSION XM_059367919 VERSION XM_059367919.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1300 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1300 /gene="LOC106093090" /note="protein trapped in endoderm-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins" /db_xref="GeneID:106093090" CDS 168..1226 /gene="LOC106093090" /codon_start=1 /product="protein trapped in endoderm-1 isoform X2" /protein_id="XP_059223902.1" /db_xref="GeneID:106093090" /translation="MDDKNTLYPHSSTMFAAVSACVLTVVGICGNLVTIIALLKSPKI RYHPTTSFVLSLCISDLLFCSFSLPLTAVRFFKEKWTFGDHLCQIFPVIFYGNVAVSL LSMVCITINRYILIACHNIYIQLYRRKWIICQLAFVWIVSFLLLLPPLLGIWGEMGLD EKTFSCTILKKNGKSIKKALFLTGFLLPCFVIITSYTCIYVKVIQQRKLIKSHREFTG PVKDHTNAVKKGQEDNRLTLMMMTIFICFLVCFLPLMLANVVDDERNTTHPWLHIVAS VMAWASSVINPIVYAASNRNYRIAYMKFLGSIKFWEKPISTLASRNSKEFCHTVRSSP PNNGTTHHDFKGCENHSL" polyA_site 1300 /gene="LOC106093090" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctttttacaa aaaaaggctt ttaatcgaaa ctcgactttt ggatccttta cataggtcgt 61 gaagttaagg catatggaaa ttcgtggtgc atatagaaat tcgcaaattg taggaagaaa 121 aggcttcgga agaaaataat attactgtta aagcccgctc aattacgatg gatgataaaa 181 acaccttgta tccccattcc tcaacaatgt ttgctgcagt gtctgcttgt gtcttaactg 241 tcgttggaat ttgcggaaat ttagttacta taattgcgct gctcaaatct ccgaaaataa 301 gataccatcc aacaacgtcg ttcgttcttt cattatgtat atctgaccta ctcttctgtt 361 catttagttt gccattaact gctgtacggt tcttcaaaga gaagtggaca tttggagatc 421 atctttgcca aatttttcct gttatatttt acggaaacgt agccgtgtct ctccttagta 481 tggtctgtat aacaattaac agatatattt tgatagcttg tcacaacatc tatattcaat 541 tgtacagaag aaagtggata atatgccaac tggcgtttgt ttggatagtc tcgtttttgt 601 tgttgttacc tccactttta ggtatatggg gagaaatggg tctagatgaa aagacatttt 661 cctgtacaat tttaaagaaa aatggaaaat caattaagaa ggcactcttt ttaacaggat 721 ttcttttacc gtgttttgtt attattactt cttatacttg catatatgta aaggttatac 781 agcaaagaaa attaatcaaa agccacagag aattcaccgg accggtcaaa gatcacacaa 841 atgccgttaa aaaaggtcaa gaggataaca gacttacttt aatgatgatg acaatattca 901 tttgcttctt ggtatgtttc cttcccctaa tgttagcgaa cgtagttgat gatgaacgta 961 acactacaca tccttggcta catattgtgg catcggtgat ggcatgggca tcaagtgtaa 1021 taaatccaat agtgtatgca gcaagtaata gaaattatcg aattgcctat atgaagtttc 1081 ttggcagtat aaaattttgg gagaaaccga tatccacgtt ggcaagtaga aactcaaagg 1141 agttttgtca tacagttcgc agttcaccac caaataatgg gacaacgcat cacgatttta 1201 aaggatgtga gaaccattca ctgtaattaa ttttatttag acagtgaata aaaacaataa 1261 aatattaaaa tacatgatca tcaagctgag aatagataaa