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LOCUS XM_059367893 4998 bp mRNA linear INV 02-SEP-2023 (LOC106082675), transcript variant X1, mRNA. ACCESSION XM_059367893 VERSION XM_059367893.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4998 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4998 /gene="LOC106082675" /note="cytosolic carboxypeptidase Nna1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106082675" CDS 228..4898 /gene="LOC106082675" /codon_start=1 /product="cytosolic carboxypeptidase Nna1 isoform X1" /protein_id="XP_059223876.1" /db_xref="GeneID:106082675" /translation="MNIELTNLLKELYLESIFSVIIYIFWKLLQYYKRTTKTTMKKFP NNLPSFNNHQAIIMKNTGFLGSFLSKGLKTNQLEVNTDEKTLRPIARLKEPRDLFALP KDKDHDCSQQAPRWPIECQVIEERIAHIPTVPTQPEPFYQPTGKELKPNPVGEENGIV VFNYNPISAVNYDKTNNRSSNKHQDDDSSDSDVSSCESQGSTPDMKTSSKRLQKNANI ITQMLTTLEQRSSSNSNGEDDDDEDDTDNDEEVDADESGDRSLRSEADKKPTTWADEN PITEEQIDDIWANKSPEYRAATPTYIRNQFGKDVIAQKYGKVGSNDLPMGFEEKLIAG LQVVLSNRASSTLVEGNTDRNEDGHHHPPFYTVSNQFDMQEAENSFTSEYAKLKANPI FNPDMSLNLQELARPRDDPNNDVNNWTKAKNPKRDPCPSCSTTTIALNGGIENRFSFS LNPNEDTFRTSCSSPKAPCSCSHNQNQNFISNQYNSQANANATQQDCSPRSNAKDKLT KSHYLPQFSRSAVGGSKFLTNCHPYNPEEYDGLEFESRFESGNLAKAVQITPAYYELY LRPDLYTSRSRQWFYFRVRKTKRNMLYRFSIVNLIKSDSLYNDGMRPLMYSTHNAKTK NEGWVRCGDNICYYRNDDDNQPSEEEEDNSSYTLTFNVEFQNDNDTVYFAHSYPYTYS DLQDYLMEIQKNPTKSKFCKLRLLCRTLAGNNVYYLTVTTPAATEELMKRKKSIVISA RVHPSETPSSWMMKGLMDFITGDSSVAKRLRHKFIFKLIPMLNPDGVIVGNSRNSLTG KDLNRQYRTVIRETYPSIWYTKALIKRLIDECGVSMYCDMHAHSRRHNIFIYGCENKR NPEKKLTEQVFPLMLHKNVADKFSFENCKFKIQRSKEGTGRIVVWMLGITNSYTIEAS FGGSLLGSRKGTHFTTQDYEHMGRAFCETLLDYCDDNPNKVKRNAKLLKRIKKIRKRE KREQKALKLKKLAEQECLRLKIIERLLKEGSSAEEPINIPLSDYSSDEGSSSSSDNEG KGSSSKDFSDLEGPCCHPLKAPPCSPELDIESRKPHKLKVRCKSLHRRKKEERLLLDL PTTDPGSDLVFSTDDEYIIDSNGIQCYGTMPRHIRRGLMQSELQRRYIEEMGDGLRNM PPELIITSPSNKSKHAPVKILFKPTTKKYVPPKSAELPLIGGPARRTSSWHNLNTASQ TPVTPQWYSMNMPRQSQSPSPKPVMKTKTIAKKEPLSKEDLDIKLSLKKKIWTGIQPE DGLPHNGVDRNKPLSWVPPPPLKTPTKKNEGPSCSHNNTKRLENEAFLTACSQKLLEW QMINSNEGDEETTGLDKPTKLPLALMMPELNEDHTMRIFKHLAQIKKPPKPKLETETK IKQKRNVITKVSETTNFIAKLSKTKTRTNLATSHRGTLAKQTVPGLSGISQHKSQTRN PNKFKTGGIVATAVQPTNTKNKTKKLKSSHKLSSGLQDAAMPPLKINGNNTSSSGGGI VIASTATTIVRKVKTKLKKKKSSPSPSTIVAANTASLKENNSTLTTGYGNTTKSLLGG SCSS" polyA_site 4998 /gene="LOC106082675" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tataaaaatc atatggaaat tgacaatttc attatttatt tcttattata ttgccgtgtt 61 agtgttcatt tcttggccat aattgttttg tgtttattgg tatcgcgcta atgccaattg 121 acaaattatt acgaatcgat ggaacagcct tttcaaggat taaaatgcga aataaaacaa 181 ccgtcaaaca aatgaaattt ctcacgcgaa aataatccaa aaatgttatg aatattgaat 241 tgacaaatct gctgaaggag ctatatttgg aatctatttt ctctgtgatt atatatattt 301 tttggaaact tttgcaatac tacaaaagaa caacaaaaac cacaatgaaa aaattcccaa 361 acaatttgcc atcatttaat aaccatcaag ctatcatcat gaaaaatacc ggcttccttg 421 gtagttttct atcaaaaggc ttgaaaacca atcaattaga agtgaacacc gatgagaaaa 481 ccctacgacc catagcacgc ctcaaagagc cacgtgacct atttgccctg cccaaagata 541 aggatcatga ctgctcacaa caggccccca gatggccgat tgaatgtcag gtcattgaag 601 aacgtatcgc ccacattccg acagtaccca cacaacccga accattttat cagccgaccg 661 gcaaggaatt gaaacccaac cctgtgggtg aggaaaatgg cattgttgtc ttcaattaca 721 atcccataag tgcggtaaac tatgacaaaa ccaataatcg ttcgtccaac aaacatcaag 781 atgatgattc cagcgattca gatgtctcct cttgtgagtc tcaaggttcc acacccgata 841 tgaagacttc ctccaagaga ttgcaaaaga atgccaatat catcactcaa atgttgacaa 901 cattggagca gagatcctca agcaactcaa atggcgagga tgatgatgat gaagatgaca 961 ccgacaatga tgaggaggtt gatgccgatg aaagtggtga cagatcatta cgcagtgagg 1021 ctgacaagaa gcccacaaca tgggctgatg aaaatcccat aacagaagaa caaatcgatg 1081 atatatgggc caataaatca cccgagtaca gagctgccac acccacctat atacgcaatc 1141 aatttggaaa agatgttata gcacaaaaat atggcaaggt tggaagcaat gatttgccca 1201 tgggctttga agaaaaatta atcgctggct tgcaagtggt gcttagtaat agggcctcct 1261 cgactttagt tgaaggcaat acagaccgga atgaagatgg tcatcatcat cctcctttct 1321 atactgtttc caatcaattt gatatgcaag aagctgaaaa ttcctttacc tctgaatatg 1381 ccaaattaaa agcaaatcct atattcaatc ctgatatgtc cctgaatctc caagaattgg 1441 cccgacccag agatgatccc aacaacgatg taaataattg gacaaaagcc aaaaacccca 1501 aaagagatcc atgtccctct tgctccacaa ccaccatagc cttaaatggc ggcatagaga 1561 atagattttc cttttcctta aatcccaatg aagacacttt ccgcacatcc tgctcttccc 1621 ccaaggcacc ctgtagttgt agtcacaatc agaatcagaa ttttatttca aatcagtata 1681 atagccaagc aaatgcaaat gcaactcaac aagactgttc tcctaggagc aatgccaaag 1741 ataaattaac taaatctcat tatttaccac agtttagtcg ttcagcggtg ggtggttcga 1801 aatttctaac caattgtcat ccctacaatc ccgaggaata cgatggcctg gaattcgagt 1861 cacgtttcga gtcaggaaat ttggccaaag ccgtgcaaat aacaccggcc tactatgaat 1921 tatatctgcg tcccgatttg tataccagtc gttcgaggca atggttctat tttcgggtgc 1981 gcaaaacgaa aaggaatatg ttgtacagat tttccattgt gaatttaatc aaatcggata 2041 gtttgtacaa tgatggcatg cgccctctca tgtattccac ccataatgcc aaaacaaaga 2101 acgagggttg ggtgcgttgt ggtgacaaca tctgttacta tcgcaatgac gatgacaacc 2161 aacccagtga ggaggaggag gataactcat cctataccct aacatttaat gttgaatttc 2221 agaatgacaa cgataccgtt tactttgcac acagttatcc atacacctac agtgatttgc 2281 aggattattt aatggaaata caaaagaatc caaccaaatc gaaattctgc aaattaagac 2341 tgctgtgtcg cacattggcc ggcaacaatg tctactattt gaccgttaca actccggcgg 2401 caacagagga attaatgaag cgaaaaaaat ccatcgtcat atcggcacgt gttcatccaa 2461 gcgaaacacc atcgtcatgg atgatgaagg gtttgatgga tttcataacg ggcgattcgt 2521 cggtggccaa acgtttgcgt cacaaattca tcttcaaact gataccgatg ctcaatccag 2581 acggtgtcat agtgggcaac tcacgtaact cgctgactgg caaagatttg aatcgtcaat 2641 atcgcacggt tatacgtgaa acctatccat ccatatggta taccaaagct ttaattaaaa 2701 gactgattga tgaatgtggc gtttccatgt actgtgatat gcacgcacac tctcgccggc 2761 acaacatttt catttatggc tgtgagaata aacgtaaccc ggaaaagaag cttaccgaac 2821 aagtttttcc actcatgtta cacaaaaacg tagcagataa gttttccttt gaaaattgta 2881 aatttaaaat ccaacgcagc aaagagggca cggggcgcat tgtggtctgg atgctgggca 2941 tcacaaacag ctataccata gaagcatctt ttggtggttc gctgctggga tcacgcaaag 3001 gaacgcactt tacaacacag gattatgaac acatgggtcg tgcattttgt gaaacattgc 3061 tggactattg cgatgacaat ccgaacaaag taaaaagaaa tgctaaatta ttgaaacgta 3121 tcaaaaagat acgtaaacgt gagaaacgcg aacagaaggc attgaaatta aagaaattgg 3181 ccgaacagga atgtttgaga ctgaagatca tagaacgtct gctgaaagaa ggatcaagtg 3241 ccgaagagcc cataaatata ccattatcgg attactcaag tgatgaaggc agcagttcca 3301 gttccgacaa tgaaggcaaa ggatcttcat ctaaagattt ttcagatctt gagggtccct 3361 gttgtcatcc gctgaaagct ccaccctgtt cgccagaatt ggatatagaa tcgagaaaac 3421 ctcacaaact caaggtgcgc tgtaaatctc tgcatcgccg caagaaagag gaacgtctgc 3481 tattggattt acccactaca gatcctggtt cagatttggt attttcaacc gatgatgaat 3541 acatcatcga ttcaaatgga atacaatgct atggcaccat gccaaggcac ataagacgag 3601 gccttatgca aagtgaactg caaagacgtt acattgaaga gatgggagat ggcctaagaa 3661 atatgccgcc agaattgatc ataacctcac cctcgaataa aagtaaacat gcaccagtga 3721 agatactctt taaaccaact actaagaaat atgtaccacc aaaatcagcc gaactaccat 3781 tgataggtgg accagcgagg aggacaagtt catggcataa cctaaataca gcttcacaaa 3841 cgccagtaac accacaatgg tattccatga atatgccaag gcaatcgcag tcaccttcac 3901 ccaagccggt gatgaagacg aaaaccattg ccaaaaagga acccctaagc aaggaagact 3961 tggatataaa attatcgctg aaaaagaaga tatggactgg tatacaaccc gaagatggac 4021 tgccccataa cggtgtcgat cgaaataaac ctctctcatg ggtaccgcca ccaccactta 4081 aaacgcccac caagaaaaat gaggggccat cgtgttcaca caacaatacc aaaagattgg 4141 agaatgaggc atttttgaca gcttgcagcc aaaaactatt ggaatggcaa atgatcaact 4201 ccaatgaggg cgacgaagag actacaggtt tagataaacc caccaaactg cccttggcct 4261 taatgatgcc agaactgaat gaagatcata ccatgagaat attcaaacat ttggcccaaa 4321 tcaaaaagcc accaaaaccc aagcttgaaa ctgaaacgaa aatcaaacaa aaaagaaatg 4381 tcatcaccaa ggtcagcgaa accacaaatt ttatagcaaa acttagcaaa actaaaacac 4441 gcaccaattt ggccacatcc catcgtggaa cgttagcgaa acaaactgtg cctggcctca 4501 gtggcattag ccaacacaag agccagacac gcaatcccaa taaattcaag acaggtggca 4561 ttgtggccac agccgtccaa ccgaccaata ccaaaaataa gactaagaag ctgaaatctt 4621 cgcataaatt aagttcagga ctgcaagatg ctgccatgcc ccccttgaaa ataaatggca 4681 ataatacctc cagtagtggt ggcggcattg ttatagcctc gactgccacc acaattgtgc 4741 gtaaagttaa gacaaaattg aaaaagaaga aatcatcacc gtccccgtcc acaatagtcg 4801 ctgccaatac tgcctccctc aaagaaaata acagcacact gaccacaggc tatggtaaca 4861 caacgaaaag cctattaggt ggcagttgtt catcgtaggg gatggatgat gacacagata 4921 acggtgaata agcaaatggt ggataagatt tatgaaattg tttagctaaa aataataata 4981 aaatttttgt attaataa