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LOCUS XM_059367892 3216 bp mRNA linear INV 02-SEP-2023 (LOC106083925), transcript variant X3, mRNA. ACCESSION XM_059367892 VERSION XM_059367892.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3216 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3216 /gene="LOC106083925" /note="E3 ubiquitin-protein ligase TRAIP; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106083925" CDS 1541..3136 /gene="LOC106083925" /codon_start=1 /product="E3 ubiquitin-protein ligase TRAIP" /protein_id="XP_059223875.1" /db_xref="GeneID:106083925" /translation="MPGLQLMCPVCTEDFQEADDIHVTNCGHLYHFSCMEDWRTRANS CPQCRLENPNTYKVYLVLSEGNETSAPSEEDEDLHAKLESSAEKINELQALLDESELN MFHIQEQYTVEQDLRKKLEHKIAENANYEENFYQLHHQFSESEERVKLLKEDNERLII EKEQSAEKLFLKAKELSMLQQSLNAATKAHSEAQLIDYTAQCSQYEDRLKLLQQEIKQ LTLDNEYKSKDIALKIREIAALRVFRQGNTDPSNKQLTNTKCILDMEQKLKDITAQLE KEIANSTQLSIDKIILQSQIQRMELQMRGTQEAPRNEQCELVDDAAINVDDDSNKNKA SVSNKTALLHTINDNELSEGTARSVVLQKFPFLELQPSLEEVIISIAAKMDVVISKGD IVKVGTIGTSAKSPKIPKQVSVYVEFASDDLKWRLLANGHLLKRDETFKAVNIAEYMD RKLHAIFLYANRKLRGVLFDYITCRNNTIIAKKTAQDADTLIIYSKEQVDELLKISNP PMKVSKPTTNATKKAPKVINEGY" ORIGIN 1 caattacttt ttgggcaacc caatattaaa tttgtttcat ttttatttac ttttgatgaa 61 gatccatggc agcagccagt gtttagttac agaaaactct caacaaataa agttgcaatt 121 ttacctcaag tcggttgttc tatattagaa gataacaaga aaagagcaat tatcggtttc 181 ttaagtgttt gatggaatca accttatggg agagctacga tgaaaccaac aacgttcctt 241 tgaatttgtt aaggagggaa gatgctgcaa tggtattgag tgggtctggc tggctggctg 301 acattcaatg gaaattagtc tgccaattat gaatgaatac agatatcttc aatgataaca 361 aagtgtccgt aaccgtagcc tcacaccact ggtcgaagcc acaatatcca aaagcattag 421 atggttagtc aaaggtttct ttgtccgcaa gggacttgag aacgttgttt ctacttttgt 481 gtacggtgct ggaatgtaaa gcaattgtag tcctatgcag ccttcgaaat acatgctgtt 541 gttgctcggc gaatggaaat tgtccaacgg gaggatcggg agtagtaagc tctcatgcgt 601 cttggctaca gataaaagaa gggagatcgc tctgttggac tcctctataa tagtcttcag 661 acaggctgag gacagttgta aggtactcga atccaggcag atccagattc ttcagcatca 721 gtgtagagat tccgtctggg aacagcacct tgcgcgactt ggcgccacgg atgacattcg 781 tagcttcgtg cacggtaatt tgtgatggct gtccagcggc acagagatca cggatacgac 841 gaatggctcc ccttcaagcc ttgcctaagg aaaatacctc acaaataacc agaaatcata 901 tggtgatata tggccatttt gctgatcgaa gttttgccaa cacacccaaa gaaatttgtg 961 tgcgtgtgta tatacgtgtg cgtacattag cagagaatat gagagaaaga agataataag 1021 aaagagaata caaacaaaaa tctgacatcc taataacctc agacctgggc ggctgttaac 1081 agctgttcgc ttgagaccac cttgttaaat ccgccttggg tgaagggtat aaaaatttaa 1141 ttttacaaaa ttccactcaa aactgtttgg ggattttttt tgcgaaattg atctaatttt 1201 ggggattttc ggggacaagg gattgaaaag tattggcaac actgatgtca agagttgggc 1261 cccttattcg gggtattccc attatgtgtt atctatcatg tcagttactt gataatgcaa 1321 aagaaaaagc ttttgttgtc tacttaacaa aaataagaag aaaccaatgt cggtcgtata 1381 attcagtctg gcagtattat ttgtggaggc aatactacta ttttttgtat ggtgcatgtc 1441 aactctggat aatttgcggt taatgttatc gaaagacaaa cagaattaaa cctacacagt 1501 gtatacaatt caattgttga ttaacgatcg caacaacaaa atgcctggcc tgcaactgat 1561 gtgccctgtg tgcacggaag atttccaaga agccgacgat attcacgtaa caaattgtgg 1621 gcatttgtat cacttctcat gcatggagga ctggcggacc agggcaaaca gctgtcccca 1681 atgccgccta gaaaatccca acacatataa agtatatctc gtacttagtg aagggaatga 1741 aacatctgct cccagtgagg aagatgaaga cctgcatgcg aaactggaat cctctgcaga 1801 gaaaataaat gaattgcaag cattgttgga tgagtcagaa ctaaatatgt tccacatcca 1861 agagcaatac acagtggagc aagatctaag gaaaaaactt gagcataaaa ttgccgagaa 1921 tgccaactac gaagagaact tctaccaact acaccaccag ttttcggaat cagaagaacg 1981 agtcaaactt ctgaaggagg acaacgaacg tttgatcatt gagaaagaac aaagtgccga 2041 gaaacttttc ttaaaggcaa aagagttatc catgctacag caatcattga acgccgcaac 2101 caaggcccat tccgaagcac agttaattga ttacacagca caatgttcgc aatatgaaga 2161 tcgccttaaa ctactgcagc aagaaataaa acaattaacc ctggacaatg aatacaaatc 2221 aaaggatatc gctttaaaga tccgtgaaat tgcagctctc agagttttcc gacagggtaa 2281 tactgaccca agcaataaac aattgacaaa tactaaatgc attcttgaca tggagcaaaa 2341 gctaaaagac ataaccgccc aactggagaa agagatagca aatagcacgc aactctccat 2401 agacaaaata atattgcaga gccaaattca gcgaatggaa ttgcagatga ggggcactca 2461 agaagcgcct cgtaacgaac aatgtgagtt agtagatgat gccgcaatca acgttgacga 2521 tgattcaaac aaaaacaaag caagcgtttc gaataagacc gcacttctac acaccataaa 2581 tgataacgag ctaagtgagg gtactgcccg aagtgtagta ctccaaaaat tccccttcct 2641 agaacttcaa ccatcgctgg aggaggttat aatatcaatt gctgcaaaaa tggacgtggt 2701 cataagcaaa ggagacatcg taaaggttgg gactatagga acctctgcta aatcccctaa 2761 aattcccaag caagtcagtg tttacgtcga gtttgcttcc gatgatttga agtggcgttt 2821 actcgccaac ggacatctgc ttaaaagaga cgaaacattc aaagccgtga acatagctga 2881 gtatatggat cgcaaactgc atgccatatt cttgtacgcc aatagaaaac tgcgcggtgt 2941 gctcttcgac tacattactt gccgcaacaa taccataata gcgaagaaaa ctgcccagga 3001 tgcggatact ttgataattt acagcaagga acaggtggac gagttgctta aaatcagcaa 3061 tccgcccatg aaagtgtcta agcctactac caatgcaaca aaaaaggccc ctaaggttat 3121 taacgaagga tattaggact gtgtacatat gtattgtatt gggttgccca aaaagtaatt 3181 gcggattttt taagagaaag taaatgcatt tttaat