PREDICTED: Stomoxys calcitrans ficolin-2 (LOC106086031), transcript

LOCUS       XM_059367832            1209 bp    mRNA    linear   INV 02-SEP-2023
            variant X3, mRNA.
ACCESSION   XM_059367832
VERSION     XM_059367832.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1209
                     /gene="LOC106086031"
                     /note="ficolin-2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 Proteins"
                     /db_xref="GeneID:106086031"
     CDS             282..989
                     /gene="LOC106086031"
                     /codon_start=1
                     /product="ficolin-2 isoform X3"
                     /protein_id="XP_059223815.1"
                     /db_xref="GeneID:106086031"
                     /translation="MSKRIDEISKRQEEQQTQLNELMKTMQPNPNVLSPMSKINGEVA
                     IEEKPKLSPQPKPATEWTTILRRQDGSVDFYRNWTEYKNGFGNPPNGEFFIGLDKLHE
                     LTNQDPPQVLTVILRDWRNEERYANYSFFKIDNEAEKYKIFALGNYEGNAGNAMAFHL
                     GQAFSTYDQDNDGTNVQNCAERWHGAWWYDNCYHSNLCATYRQEHDKFSKGIAWMQWK
                     GHDYSLKYAEMKIRPKK"
     polyA_site      1209
                     /gene="LOC106086031"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aagctgtgaa aaaatttgtc aacgcagact atatgaaaaa tccgcaatta ctttttgggc
       61 aacccaatat ataaacaaat cttgggaatg agatgttggg ttattacgtt atgattgcaa
      121 cagaactgca atgaatgaat gaatgatgat attacctatc tattggggat ctagaggatc
      181 caaatgaaga tccacacagt ttgatactat ggaagaatct atttgacaaa gtgaattcac
      241 ttctggaaaa cactgatcag cttcatagca aatttttgga tatgagcaaa aggattgatg
      301 aaatcagcaa aagacaagag gagcagcaaa cccagttgaa tgaattaatg aaaactatgc
      361 agcctaatcc gaatgtatta agtcccatga gtaaaatcaa cggtgaagtg gccatagaag
      421 aaaagcctaa actttcccca caaccgaaac ccgcaacaga atggaccacc atactcagac
      481 gtcaagatgg ttctgtagat ttctatcgca attggactga atacaaaaat ggtttcggca
      541 atccgccaaa tggtgaattt ttcataggct tggataaatt gcacgaatta accaatcaag
      601 atccaccgca ggtgcttaca gtcatactac gggattggag aaatgaggaa cgttatgcca
      661 attatagttt tttcaaaatc gataatgaag cggaaaaata caaaatattt gccttgggca
      721 attatgaagg caatgctggc aatgcaatgg cctttcattt gggacaagcg ttcagtacat
      781 acgatcagga taatgatggc acaaatgttc aaaattgtgc cgagagatgg catggggctt
      841 ggtggtatga taattgttat cacagcaatt tatgtgccac ttatcgccaa gagcatgata
      901 aattttcgaa gggcatcgcc tggatgcaat ggaaaggtca tgactattcg cttaaatatg
      961 ctgaaatgaa gataagacct aagaaatagt aacagctaac caaaatgatg gccagacaat
     1021 atttcagaaa acaagttcaa tattttgaag ttaaggaaaa atttaattta attaagaatg
     1081 tgaagaaaga tttttgtagt aacctaattt tcccattaat taaaatgatg gcatattttt
     1141 taattaaaac caaaatattg ccacaatttt cttttgaagt aaagatcaga tttcaattca
     1201 acaaccata