PREDICTED: Stomoxys calcitrans ficolin-2 (LOC106086031), transcript

LOCUS       XM_059367830            1178 bp    mRNA    linear   INV 02-SEP-2023
            variant X1, mRNA.
ACCESSION   XM_059367830
VERSION     XM_059367830.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1178
                     /gene="LOC106086031"
                     /note="ficolin-2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 Proteins"
                     /db_xref="GeneID:106086031"
     CDS             62..958
                     /gene="LOC106086031"
                     /codon_start=1
                     /product="ficolin-2 isoform X1"
                     /protein_id="XP_059223813.1"
                     /db_xref="GeneID:106086031"
                     /translation="MKTLYFCLYLGTIFSLGISANTTPSEYYDPNEDPHSLILWKNLF
                     DKVNSLLENTDQLHSKFLDMSKRIDEISKRQEEQQTQLNELMKTMQPNPNVLSPMSKI
                     NGEVAIEEKPKLSPQPKPATEWTTILRRQDGSVDFYRNWTEYKNGFGNPPNGEFFIGL
                     DKLHELTNQDPPQVLTVILRDWRNEERYANYSFFKIDNEAEKYKIFALGNYEGNAGNA
                     MAFHLGQAFSTYDQDNDGTNVQNCAERWHGAWWYDNCYHSNLCATYRQEHDKFSKGIA
                     WMQWKGHDYSLKYAEMKIRPKK"
     polyA_site      1178
                     /gene="LOC106086031"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attcattatc aaaacagaca gttcccattc gtttgctgct tgtgaaacat ataccggtat
       61 tatgaaaaca ctctattttt gtctatattt ggggacaata ttttctctgg gaatttccgc
      121 aaatacaaca cccagtgaat actatgatcc aaatgaagat ccacacagtt tgatactatg
      181 gaagaatcta tttgacaaag tgaattcact tctggaaaac actgatcagc ttcatagcaa
      241 atttttggat atgagcaaaa ggattgatga aatcagcaaa agacaagagg agcagcaaac
      301 ccagttgaat gaattaatga aaactatgca gcctaatccg aatgtattaa gtcccatgag
      361 taaaatcaac ggtgaagtgg ccatagaaga aaagcctaaa ctttccccac aaccgaaacc
      421 cgcaacagaa tggaccacca tactcagacg tcaagatggt tctgtagatt tctatcgcaa
      481 ttggactgaa tacaaaaatg gtttcggcaa tccgccaaat ggtgaatttt tcataggctt
      541 ggataaattg cacgaattaa ccaatcaaga tccaccgcag gtgcttacag tcatactacg
      601 ggattggaga aatgaggaac gttatgccaa ttatagtttt ttcaaaatcg ataatgaagc
      661 ggaaaaatac aaaatatttg ccttgggcaa ttatgaaggc aatgctggca atgcaatggc
      721 ctttcatttg ggacaagcgt tcagtacata cgatcaggat aatgatggca caaatgttca
      781 aaattgtgcc gagagatggc atggggcttg gtggtatgat aattgttatc acagcaattt
      841 atgtgccact tatcgccaag agcatgataa attttcgaag ggcatcgcct ggatgcaatg
      901 gaaaggtcat gactattcgc ttaaatatgc tgaaatgaag ataagaccta agaaatagta
      961 acagctaacc aaaatgatgg ccagacaata tttcagaaaa caagttcaat attttgaagt
     1021 taaggaaaaa tttaatttaa ttaagaatgt gaagaaagat ttttgtagta acctaatttt
     1081 cccattaatt aaaatgatgg catatttttt aattaaaacc aaaatattgc cacaattttc
     1141 ttttgaagta aagatcagat ttcaattcaa caaccata