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LOCUS XM_059367816 2980 bp mRNA linear INV 02-SEP-2023 domain (LOC106089061), transcript variant X4, mRNA. ACCESSION XM_059367816 VERSION XM_059367816.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2980 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2980 /gene="LOC106089061" /note="NCK-interacting protein with SH3 domain; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106089061" CDS 96..2390 /gene="LOC106089061" /codon_start=1 /product="NCK-interacting protein with SH3 domain isoform X3" /protein_id="XP_059223799.1" /db_xref="GeneID:106089061" /translation="MLKALYDFQAVYPKTISFDEGEYFILYQTSARQRNWWQVVSMKG NIGFVPSNYVMKIKVEPDFLISFLNSSIESLELSKEAEINGIMPKDELLDRLREKKIS MEKMYLDNSERDGDSSLSFSQSIGDGKHSAPHSQEHRPHSPPHSKRLDSSKKSISSPS MATALPLMISESPSMGSMQVQTQQGQQQQQAQLPSPAQSKVNDVAQDNSVTSEHSETT TTTTTTSEDVVTTYKEPSLNDSSASYTHSKENGTLKSENKDSSSKDRKSKEKSSKLDN HVKTQNGIDEKEDKTGNDRSEGSDGPASEERNVNGTATKGDSNDNSQNLDSEDSGAAM QQLHAAAAAAALAHTGGYPRPNLKVESSDVYQIVDVIRRNTNLSFDLSCEALRVVLTS LEQLYNGAINPYLEAVAIHVTEKVETPKGLLGVTHDSKKLQYIFSQLADCKNDSEQRT WMLYEDEEDIAQFLEDLVDILNNADETICCYEMSCDQYQALVNLVQYYQMETRWNIKR LLLRTFTAACHLDHIIVDILLTSVLPLEIVEDMKTNFSNLDRFKQLVKMLTIIFSLGQ PMPVNHQDYLGVHFASFLLEIIEGNNPEVLVDMVISLVLAFNLQFNESTQNVIVEAMQ TLPSAKVFTEKILLLLNREEDPVKVLKHTTDCMNSVLKMFIDIFSVSETAAMFYTNDT KVLIDIIVRQLTDLCAGNSLRRCYLELCRRILRNTDYQEHQHRKQDFMKIFTRIFCEE TECSASDQKLVREIANEFPQIFKA" polyA_site 2980 /gene="LOC106089061" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtgcagtgct ccgtagtttt tactcttgct gaagttcgag tgcgtgtttt ttttttttta 61 atttgtacac aaaaaatttt tcggataaca tcgaaatgct taaagctttg tatgattttc 121 aagccgtcta tcccaaaacg attagtttcg atgagggtga atacttcatt ttgtatcaga 181 cttcggcacg ccaaaggaat tggtggcagg tggtcagcat gaagggcaac ataggatttg 241 tgccttccaa ttacgtaatg aaaataaagg ttgaacctga tttcctgata agcttcctaa 301 actcttccat tgagtcattg gagctttcca aagaggctga aataaatggc attatgccca 361 aagatgaact gctggatagg ctgagggaaa agaaaatttc catggagaaa atgtatttgg 421 ataattctga aagagatggc gactcatcac tctccttctc acagagcatt ggtgatggca 481 aacacagtgc tcctcattca caagaacatc gaccccacag tccaccgcat tcgaaacgtt 541 tggatagcag taagaaatca atatcaagtc cttccatggc caccgcattg cctcttatga 601 tttccgaatc acccagcatg ggttccatgc aagttcaaac gcaacaaggc caacaacagc 661 agcaggcaca gttaccctca ccggcccaga gtaaagtcaa tgatgtggcc caagacaaca 721 gtgtaacctc tgaacattct gagaccacca ccaccacaac aactaccagt gaagatgtgg 781 tgaccaccta taaagagccc agtctaaatg attcatcagc ttcctataca cattctaaag 841 agaatggtac cctaaagagc gaaaataagg attcctcctc caaagatcga aaatccaagg 901 agaaatccag taaattagat aatcatgtta aaacgcaaaa tggtattgat gaaaaagagg 961 acaagactgg taacgatcga tctgagggta gtgatggacc tgccagcgag gagagaaatg 1021 tcaatggcac tgccacaaag ggtgacagca atgataacag tcaaaacctt gatagtgagg 1081 atagtggtgc ggccatgcaa caattgcatg cagcagctgc ggctgcagcc ttggcccata 1141 ctggcggtta tcccagaccc aatttgaagg tagagtcgtc agatgtctat caaattgttg 1201 atgtcataag acgtaacacc aatctgagtt ttgatttgtc ctgcgaagcc ttgcgagtgg 1261 tactcaccag tttagagcag ctttataatg gtgcaatcaa tccttatctg gaggcggtgg 1321 ccatacacgt aaccgaaaaa gtggaaaccc ccaaaggatt gctgggtgtc acacacgatt 1381 caaagaaact gcagtacata ttctctcaat tggccgattg taaaaatgac tcggaacagc 1441 gtacatggat gttgtatgag gatgaagaag atattgctca atttttggag gatttggtcg 1501 atatattgaa taatgccgat gaaactattt gctgctatga aatgtcctgt gatcaatatc 1561 aggccctagt caatttggtg cagtactatc aaatggaaac acgttggaat ataaaacgtc 1621 tgttgctcag aacattcaca gctgcctgtc atttggatca cattattgtt gatatactgt 1681 tgacctcagt attgcctttg gaaattgtgg aagatatgaa aacgaatttt tcaaatttag 1741 atcgttttaa gcaattagtc aaaatgttaa caattatatt ctcactgggc caacctatgc 1801 ctgtaaatca ccaagattat ctgggtgtac attttgcctc cttcctactg gaaataatcg 1861 aaggcaataa tcctgaagtt ctagtcgata tggttatatc tttagtttta gcctttaatc 1921 tacaatttaa tgagagcaca caaaatgtca tagttgaagc tatgcaaacc ttaccctcag 1981 ccaaagtgtt tacagagaaa atccttttac ttctgaatcg ggaggaagat cctgttaaag 2041 ttttaaaaca caccacagat tgtatgaatt cagttttgaa aatgttcatt gatatcttca 2101 gtgtatcgga aacagcggca atgttctata ccaatgatac caaagtttta atagacatca 2161 ttgtaagaca actgactgat ttatgtgctg gaaattcgct gagacgttgc tatttggagt 2221 tgtgtcgtcg tattctacga aacaccgact atcaggaaca tcagcatcgt aaacaagatt 2281 ttatgaaaat ctttacccgg atattctgtg aggaaactga atgtagtgcc tccgatcaga 2341 aactagtaag agaaatagcc aatgaatttc cccagatatt caaggcttaa gcatagaaat 2401 aaatgacaac agatgtaagt ttgtttacac tgaaaatgca attaaataaa acacattttg 2461 aaacacccac aatacatatt tttaaaataa gcaatttctt ataagagttt tgttcttaag 2521 gtttcccaaa aaaattttga gtaaaacttg ataagttcat gacaaggatt aatttttttt 2581 ttaaattgtt tttatgtgat agcaaacatt tttgttttgt ttttttgaat ttatttttaa 2641 cgtagttgta ataaattctc tcttttttag aaccaaagta tttttttttt atttttgttt 2701 taatctttaa tgtgttctta aagaactttt ttttagtgaa ctatgaaact taaataagat 2761 tactggaata taatgaaacg atgaggaaga agaaaaagat aagaatcctg ttattatatt 2821 taaggccata ttgaacattt ttttacaaag tataaagaaa aaccgaaata atcccatata 2881 aattgaaact ttgtaacata atttttagat aaatcgtagt ttgaaaaagt cttcaaattc 2941 aaattgaata actgattcaa gaaattatta ttaatgagaa