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PREDICTED: Stomoxys calcitrans


LOCUS       XM_059367710            2847 bp    mRNA    linear   INV 02-SEP-2023
            dolichyl-diphosphooligosaccharide--protein glycosyltransferase
            subunit STT3A (LOC106090671), transcript variant X2, mRNA.
ACCESSION   XM_059367710
VERSION     XM_059367710.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2847
                     /gene="LOC106090671"
                     /note="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit STT3A; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     Proteins"
                     /db_xref="GeneID:106090671"
     CDS             304..2454
                     /gene="LOC106090671"
                     /codon_start=1
                     /product="dolichyl-diphosphooligosaccharide--protein
                     glycosyltransferase subunit STT3A"
                     /protein_id="XP_059223693.1"
                     /db_xref="GeneID:106090671"
                     /translation="MAVETANPAQKTGFLLTWEKQEHLVKLAILIIAAVLSFATRLFS
                     VLRFESVIHEFDPYFNYRTTRFLAENGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMVT
                     SAALYRILWLLNITVDIRNVCVFLAPFFSSLTTLVTYALTKEIHSTGAGLVAGALISI
                     VPGYISRSVAGSYDNEGIAIFCMLLTYYLWIKAVKTGAIFWAAMSALAYFYMVSSWGG
                     YVFLINLIPLHVLALMCTGRFSHRVYIAYSTLYCLGTILSMQISFVGFQPIQSSEHML
                     ALGVFGLCQIHAFVDFLRSRMPTEHFEILFKALVSTILTAAFIVGILLTITGKVSPWT
                     GRFYSLLDPSYAKNHIPIIASVSEHQPTSWSSFYFDLQILVFLFPAGLYFCFVKLTDA
                     NIFIILYGVTSIYFAGVMVRLMLVLAPVMCVLSGIAVSHLLAKYIKSMEAASAAGKPV
                     ESKRQYKKMEQQSGGVKKEVAIAFVGVVTMMLIVYTFHCTWVTSEAYSSPSIVLSARS
                     HDGGRIIFDDFREAYYWLQMNTPEDARIMSWWDYGYQITAMANRTILVDNNTWNNTHI
                     SRVGQAMASSEEKAYEIMRELDVDYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDRGA
                     HIKEKDYYAGNGEFRVDKDGSPTLLNCLMYKMCYYRFGQVYTEGGKPPGYDRVRAAEI
                     GNKDFELDVLEEAYTTEHWLVRIYKVKDLSNRGV"
     polyA_site      2847
                     /gene="LOC106090671"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccgtgggcgt ttgtgttagc agaaattgta gattagaaat taatgatttg tgccaattat
       61 taaacccgaa atctcgaaaa acaagtgcat atttatccta tactctgttt acaaatattt
      121 cacaaacaag tgatggatct atactacttt tatttgtgat ttcagtttct tttgtctaga
      181 ttggcaagtg cgagacgccg gctattaaat agacatttcc ccggctttta tatttgaagt
      241 gatagaatta cgtgtgattc cagttaagag tgttcggctt atgcttaatt gatatcgagg
      301 aaaatggcag tcgaaactgc taacccagca caaaaaaccg gatttctcct cacatgggaa
      361 aaacaggagc atcttgtgaa gctagccata ttaataatag ccgccgtttt gtcgtttgcc
      421 acgcggttgt tctctgtgct gcgttttgaa agtgtaatcc atgagttcga tccctatttc
      481 aattaccgca ccacgcgttt tttggctgaa aatggtttct acaagtttca taattggttc
      541 gatgatcgag cgtggtaccc tctgggacga attattggtg ggactatata tcccggattg
      601 atggtaactt cggctgccct atatcggata ttatggctgt taaacatcac ggtggacata
      661 cgcaatgtat gtgtttttct ggcgcctttc ttctcctcgc ttactacact ggttacatat
      721 gctctgacca aggagatcca tagcactggt gctggtttag tggctggggc attaatttct
      781 atcgttcctg gatacatatc acgttcggta gctggttcat atgacaatga aggcattgcg
      841 atattctgca tgcttttgac atattatctg tggataaagg ctgttaaaac gggcgcgatt
      901 ttctgggctg ccatgtctgc tttggcttat ttttatatgg tatcttcttg gggtggatac
      961 gtattcctta tcaatttgat acctctacat gtgttggcgt taatgtgtac tggacgtttt
     1021 tcgcatcggg tttacattgc ctacagcacc ttgtactgtt tgggaactat tttatcaatg
     1081 caaatatcgt ttgttggatt tcaaccaatt caaagttccg agcacatgct ggccttggga
     1141 gtttttggtt tgtgccaaat tcatgccttt gtcgatttct tacgatcccg catgcccaca
     1201 gaacattttg aaatcctctt taaggctttg gtctctacaa ttctcacagc tgccttcatt
     1261 gtgggcatat tgttgactat aacaggaaag gtctcgccat ggaccggacg tttctattca
     1321 ttattggatc cgtcttatgc caaaaaccat attcccatta ttgcctctgt gtcggagcat
     1381 caacctactt cgtggtcttc attttatttc gatttacaga ttctggtatt tctttttccg
     1441 gctggacttt acttctgttt cgtcaaactg acagatgcga atatttttat tatactctat
     1501 ggtgttacaa gcatttattt cgccggtgta atggtgcgat tgatgttggt attggcacca
     1561 gttatgtgtg tactttcggg catagctgtt tctcatttgt tagccaaata catcaagtca
     1621 atggaggctg catcggcagc cggaaaacca gtggaaagca aaaggcaata caagaaaatg
     1681 gaacagcaaa gtggtggtgt caaaaaagaa gttgccatag catttgtggg cgttgtcact
     1741 atgatgctaa ttgtttatac attccattgt acatgggtaa cgtcggaggc ttattcttcg
     1801 ccaagtattg tgctaagtgc tcgttcgcat gatggtggcc gaattatctt tgacgatttt
     1861 cgtgaagcct actattggtt gcagatgaat acacctgagg atgcgcgaat aatgtcttgg
     1921 tgggattatg gctatcaaat aacagcaatg gctaaccgca ccattcttgt ggacaacaat
     1981 acttggaata atactcatat atcgcgtgtg gggcaagcga tggcttcatc tgaggaaaag
     2041 gcctatgaaa ttatgcgcga actagatgtg gattatgttc ttgtcatttt cgggggctta
     2101 actggatatt cttcagatga catcaacaag ttcctatgga tggtccgcat tggtggcagt
     2161 actgatcgtg gtgctcatat caaagagaaa gactactatg ccggaaacgg tgaatttcgg
     2221 gtggacaaag atggttcgcc cactctgctc aactgtctta tgtacaaaat gtgctactat
     2281 cgattcggcc aggtctacac tgagggaggc aaaccgccgg gatacgatcg agtaagagct
     2341 gctgaaatcg gtaacaaaga ttttgaattg gatgttctcg aagaggccta tactaccgag
     2401 cattggttgg tgcgcattta caaagttaag gatttgagta atcgtggcgt ttaagcgaca
     2461 tggaaatatc attcttcttt cctacccact cactcacgtt tacttaaagt tatatagcaa
     2521 tccttgtctt aatattgttg atcaattctt tttgttttta ccacagtatt ctaatctaca
     2581 ttatgttttt tttacaaata tctaattatg aatctcactc tcgaaaagaa attttgcatc
     2641 gaattcctta acgaactcta agctataaca attaccttta gttaacacaa gaaatggaat
     2701 ttttaaagaa atttccctaa agatttagca caaatttgtg tacgacagaa tcagccattt
     2761 aaattaagaa attagttcac ttggcgagct ccatgacaga caggctatac taaacgcaaa
     2821 taaatatatt ttatagaaga aaattaa