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LOCUS XM_059367689 8147 bp mRNA linear INV 02-SEP-2023 protein (LOC106088108), transcript variant X2, mRNA. ACCESSION XM_059367689 VERSION XM_059367689.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8147 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8147 /gene="LOC106088108" /note="supporter of activation of yellow protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106088108" CDS 446..6859 /gene="LOC106088108" /codon_start=1 /product="supporter of activation of yellow protein" /protein_id="XP_059223672.1" /db_xref="GeneID:106088108" /translation="MNVTNRRSSTDADTPPSIQTQNHQPQLIAYITCRQAASASNRSN RSRQEEDQEPLVTSTSADSVLPLQAEGEGEEVSIDLETADTSIEHITSSTHCYEFVNE SLDEMVMPSTSQSTSLGSEGSSVNSINTGISSSNRSTRSFPIDMVARDVNSKTLNDTS ARGTNRITSESTVRLRDIDDQSTSSANNITVDSMPHIDKNKIILKLPKMTGNESQMFS STEDDLRKVEPLKINLHNTHHHHYSSNTHHTPKITIKPILKENAAEALVSSEDCSSSA EEEMVSRLNNTEPHILPKLTIRAKNEDYGSSQTSVVPKLTIKINDSNSAESLTTATAA HTPPLPKLTIKTGQDGHPESIISNVSPASSTTSSSSSMASSSTSSSSGNFLLATPSIP IPKLTIKPVQKEDSKSAEVSDSHPSIPKLCIKTNTLCTDSTEEPILSKIPKLTIKTGH EHAVIITQHNDGAKAKGIPKMTIKTKSLDTADDSSISASSVVEKIPKFTIKTTTGNDL SKLCRNKSQSEVDNVSGTPLTSPKQSISKITINRNAIQMENMLGIQGNVETHCSSKTL TKEQCKIDSVPKVAAKSTTNRSSQIEDICISSDFDDECEDQNAGNSKIVPKLTIKNVG SPQQKLKFVVDTDIKSNKNTITLPVVDVADEFDLLNVDNVGGESSNSQEFCGFNDNAD CTQNKEIGLDADANTKPELPRRHSDDMDIDETLRDQHEPKIFQNATNIHAQDSSNFIT NEEMDLNGKASLKIGHIIDTVDLTSSAGSSPVHRFDYNDGEGEDNDVREKSPMVTNTI VPSTNILLECLQRETTVIQNTQQLTQQTQHNTALPPLQPKPMVATKSSVSLKYPQLAE RLLANGSSVGCMDVGPSSAKKDSVENIIDSIEILDTPEGSPRGFIDDRHENDTIFNEN LQTLNGLNVSEENRLLSLNNNSLNLKRPVSQECHVSETICTAMSEKTIETPSKLRKIQ NESEQLNTKNNALQQYLPTGYQNHQRLRKQKHEHLLPIPMDEVTDAIQTNSNDSLDLQ INIDSNENSTPIVKKRGRPKKSEINLTSENAKEEHTINSDNRQDCKARRVQLLRKRLA IDMVDAEQPVALITDIATSGGPEDNKSEQNIIETPKRERNLRTPLRTSRRSNTPINFQ SELKTSKSKPLSSLSLENKKTSNDTGSENELNHFHESNSSISSVSFHSSSTIQNITNI ANSVSHSMTSQIDLTISSSSSNSNGSTTNTITTVEATSRNDGPVFVIPDCSVNGANIG SNSHNSMLPPTTILSSSDPLPDMIFKPNDFSSIIATQQLRVSNFSTVYKPGSVASQEE ETADDVSGADNSEDDSASSSSMPAIPGRSRGRVRGSRGRSIGRGQRSHGISRDSLSVK SIAMNRPRCIGALKHTPDPERIKELFSPSPQVFEEDTRMSADLSQTSLQQQSPSYSSQ PDFFTNEESQSSIISNTSIIDPNSTASAQNSASAKKTTKKKKMEVCVAEDTDFTVASI AEYDWPPPKGCCPSKNRDTFMIQEQVAMYLGIKSFKRKYPDLPRRQVDMEERNWLQEK GLVSEKMCDLGITAVWASDILDIMYTDFYEKYEEYKDFVRQKHLREIEAKQKSLGLNV AGRGLQARERAMLSTSKWNSYFNRTRKDERLSFLDLQTLVINKPCPSTAPLSTIPNRP VAEAVALAIKTERISQPPTLLKPRIWEPSRPRDIYYPLSLVPGQFCEKYHDYSSDELR CMPLNTVVDPIVQMWSCKDCGNNSSDTDSAIESIDNKTEIDKSLPGRRHKKRRLRRTR QPGNMSADEFKVPLLPGAPVISTSSTDSCSSSDTSSSETDSESSCSSSSSDESSNGEE SLATCEVCLRPHNRNLNNVPELFLQCYTCRRRVHPSCIEMPHRMSLRVRNYNWQCADC KCCVKCKRRHDQNKMLFCEQCDRGFHIYCLGIKTVPDGRWSCNRCSICMRCGATTPEG LSHMHQLINTAQGEHVKQTKQKKAKWVNEYRLDHLTKIKEHCSMLCIPCGKMKNSKRA QNVAHNNATTKATSPCSLSESSSNSFINYPPPSAISSQKLLPSPNATSNGELMHSSTV KESSGHAAPSTSIPTEDSYFSDNKDSERYSPVPSSFTSSIIAASNTQMTTTHNATGGP PPVVA" polyA_site 8147 /gene="LOC106088108" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttgtttttt gcgacatttc agtagttgat ttttggacat aacttagtgc ttgcagcata 61 aactaaagct tacaaaaatg aatctttaac aaatctttaa tatattgcaa aaaaagtcca 121 tatgaacgcg agtgtctatg caactgtctg gccagttcag ttgtgtgtaa tgtgtgcaat 181 aaatgaatta ttttgagtga tttgtaccta actaatgttt aacacatttt caacaacgct 241 aaagatttga agtgacattt gtttttgcta taagcaactt ttacaacgct tgtttgtacg 301 agtaccacac ggatttcgta aatataataa gcttgtgccc aacatgcttt catttagtca 361 ataaagtaca agaatccaga aattttgtgg caaaaaaacg aaaatacaga aaaacttgga 421 aagttaattt caatacacat aagagatgaa tgttacaaat cgacgaagtt cgacggatgc 481 agatacacca ccatcaatac agactcaaaa tcaccaacca caattaatag cttatataac 541 ctgtcggcaa gccgcttctg cttcgaatag gagcaatcga tctcgacaag aggaggatca 601 agaacctttg gttacctcga catcagcaga tagtgtgtta ccactgcagg cggagggtga 661 aggggaggaa gtttcaattg atttggagac agcagacact tccattgaac acattaccag 721 cagcactcat tgctatgaat ttgtaaacga atcacttgat gaaatggtta tgccatctac 781 atcacagagc acaagtttag gatccgaagg ttcatctgta aactccatta atacaggtat 841 aagcagcagc aaccgctcaa ccaggtcttt tcctatagat atggtggcta gagacgttaa 901 tagtaaaact ttgaacgata catctgctcg tggaactaac cgaatcactt ctgaatctac 961 tgtgagactt cgtgatatcg atgatcagtc gacttcatca gctaataata tcacagtgga 1021 ctcaatgccg cacatagata aaaataaaat aatacttaaa ctgccgaaaa tgaccggaaa 1081 tgaatctcaa atgttttctt ctacagaaga cgacttacgt aaggtggaac ctttaaaaat 1141 aaatcttcat aatacgcatc atcaccatta ctcttccaat acccatcata caccgaaaat 1201 aactataaaa cctattttaa aggaaaacgc cgcggaagct ctggtgtctt cggaggactg 1261 ttcttcttca gccgaagaag aaatggtttc gagattgaac aataccgaac cacatatctt 1321 accaaaatta actattcgag caaaaaatga agattatgga tcgtcacaaa cttctgttgt 1381 tccaaaactt acaattaaaa taaatgactc taattcggca gaatctctaa ctacagcaac 1441 agctgctcac acaccaccat taccaaagtt aactataaaa accggacagg atggccatcc 1501 tgaatctata atatctaatg tgtcaccagc ttcatccact acatcatcat cgtcgtcgat 1561 ggcatcatct tcaacttctt cctcgtcggg taatttttta ctggctactc catcaatacc 1621 aatacctaaa ttaactataa aacctgttca aaaagaggac tccaaatcag ccgaagttag 1681 cgattcccac ccatctatac ccaagctatg cattaaaact aatacgctat gcacagactc 1741 aacggaagaa ccaattcttt ccaaaatacc aaaacttact ataaaaacgg gacacgaaca 1801 tgcagttatt ataacacagc acaacgacgg cgcaaaggca aagggcatac ccaaaatgac 1861 tattaaaacg aagtctctgg atactgctga tgactctagt atttcagcat cctccgttgt 1921 agagaaaata ccaaaattta caataaagac cacaactgga aatgatctat ctaaactttg 1981 tagaaacaaa tctcaatctg aagtcgacaa tgttagcggt acaccattga cgtctccaaa 2041 acaatcaatt tcaaagataa ccataaatag aaatgctatt caaatggaga acatgttagg 2101 aattcaagga aatgtggaaa cacactgctc gagtaaaact ttaaccaagg aacaatgcaa 2161 aatagatagc gtaccaaagg ttgcagcaaa atcaacaaca aacagatcat cacagatcga 2221 ggacatttgt attagttctg actttgacga cgaatgtgag gaccaaaatg ccggaaacag 2281 taaaattgtg ccgaagttaa ctataaaaaa tgttggctct ccacaacaaa aactaaaatt 2341 tgtcgttgac acggatataa aatcaaataa gaatacgatc actttaccag tggttgatgt 2401 tgcagacgaa ttcgatctat taaatgtcga taatgtcggc ggggaatcta gtaattctca 2461 agagttctgc ggctttaatg ataatgcaga ttgtacccaa aataaagaaa ttggtctgga 2521 tgcagatgct aacactaaac ctgaattgcc tcggcgtcat tccgatgata tggatataga 2581 tgaaacactt agggatcagc atgaaccaaa aatatttcaa aacgccacaa acattcatgc 2641 acaagattcc tccaatttta ttactaatga ggaaatggac ttaaacggga aagcatcgtt 2701 gaaaattggg catattattg atacagttga tttaacatcg tcagcaggca gttcaccagt 2761 gcaccgtttt gactataatg atggcgaagg agaggataac gatgtcaggg agaaatcgcc 2821 aatggtaaca aatacaattg tgccttcaac aaatattttg ttagaatgtc tacaaagaga 2881 gaccactgta atacaaaaca cccaacaatt gacacaacaa acacagcata acacagcact 2941 gcctccatta caacctaaac ctatggtagc aactaaatca tcagtttctc tcaaatatcc 3001 ccagttggct gagcgtttat tggctaacgg ttcatcagtt ggctgtatgg atgtaggacc 3061 atctagtgca aagaaagact ccgtcgaaaa tatcatagac tccatagaaa ttcttgacac 3121 tccggaaggg agtcctcgtg gtttcataga cgacagacat gaaaatgata ctatctttaa 3181 cgaaaaccta caaacactaa atggtctaaa tgtttcagag gaaaaccgtt tactgagcct 3241 taataacaac agtttaaatt tgaaacgacc tgtttcgcag gaatgtcatg tttcagagac 3301 tatatgtaca gcaatgtcgg aaaagacaat agaaacaccc tctaaattgc gcaaaataca 3361 aaatgaaagc gaacagctaa atacaaaaaa taatgcctta caacaatatc ttccaacagg 3421 ataccaaaat catcagcggt tgcgtaaaca aaaacatgaa catttgttac ctatacctat 3481 ggacgaagta acagatgcca ttcaaacaaa ttcgaacgat agtttagacc ttcaaattaa 3541 tattgactcg aatgaaaatt ctactccaat tgtaaaaaaa aggggaagac ctaaaaaatc 3601 ggaaatcaat ttaacctcag aaaatgccaa agaagaacat acaataaatt cagacaatag 3661 acaggattgc aaagcacgca gagttcaatt gttacgaaaa agactagcaa ttgacatggt 3721 cgatgcggag caaccagttg ctcttattac cgacattgca acatcgggag gcccagaaga 3781 taacaaaagt gaacagaata ttatagaaac acctaaaaga gaacgaaatt tacgaactcc 3841 cctgagaaca tcgagaagaa gtaacacgcc aataaacttt caaagtgagc ttaaaacatc 3901 aaaaagtaag cctttatcgt cattgtcatt ggaaaacaag aaaacatcaa acgatacagg 3961 ttctgaaaat gaactcaatc acttccacga atcgaattcg tctatatcgt ctgtcagctt 4021 tcatagttca tcaacaattc aaaatattac aaacattgca aatagtgtta gtcattcaat 4081 gacttcccaa attgatttga ctatatcttc atcatcaagc aatagcaatg ggagcacaac 4141 gaacacaatt accactgtag aagctacatc gagaaacgat ggccccgtct ttgttattcc 4201 tgattgtagt gttaatggtg caaatattgg aagtaatagt cataattcaa tgttgccacc 4261 cacaacaatt ttatcgtcgt cagatccttt accggatatg atattcaaac cgaacgattt 4321 ctcttctata atagctacac agcaattaag ggtctccaat ttttcaactg tttataaacc 4381 tggatcagtt gcatcacaag aagaagaaac ggcggacgat gttagtggag cagataactc 4441 tgaagatgac tcagccagtt cttcttctat gcctgcaata ccaggccgta gccgtggacg 4501 tgttcgggga tcccgcggaa ggagtattgg tcgtggtcaa cgaagtcatg gtattagtcg 4561 tgatagttta agtgtaaaat ctatagctat gaatcggcca cgttgcatag gagcccttaa 4621 gcatacccct gatcctgaga ggattaaaga actcttcagt ccgtctcctc aagtttttga 4681 agaagacacc cgtatgagcg ccgatttgtc tcaaaccagt ttacaacaac aatctccttc 4741 ttattcaagc caacctgatt tttttaccaa tgaggagtcc cagtcgtcca ttatcagcaa 4801 tacgagcatt atagacccga atagcacggc atcagctcaa aatagtgcat ccgccaagaa 4861 aacaacgaaa aaaaagaaaa tggaagtttg cgttgctgaa gacaccgact tcacagttgc 4921 atctatagca gaatatgatt ggccgccacc gaaaggttgt tgtccctcaa aaaatcgaga 4981 tacctttatg atacaagaac aggttgcaat gtacttggga attaaaagct tcaagagaaa 5041 atatcccgat ttaccccgcc gtcaagtaga tatggaagag agaaattggt tgcaagaaaa 5101 agggctggtg tctgaaaaaa tgtgtgattt aggaatcacg gccgtatggg cttccgacat 5161 tttggacata atgtatacag atttctatga aaagtacgag gagtataagg actttgtacg 5221 gcaaaaacat ttgcgtgaaa tagaggctaa acagaaatca cttggactca atgtggctgg 5281 aagaggttta caagctcgcg aaagagccat gttatctact agcaaatgga actcatactt 5341 taacagaacg cgcaaagacg aacgattgtc attcctcgat cttcaaacgc tggtcattaa 5401 caaaccctgc ccatctacag cccctttatc tactataccc aaccgtccag ttgctgaagc 5461 agttgcgtta gctataaaaa cggagcgcat ttctcaacct ccgactttgc ttaaacctcg 5521 gatttgggaa ccatcaaggc caagagatat ttattacccg ttatctctcg ttccaggcca 5581 attttgtgag aaatatcacg actattcatc tgatgaatta cgatgtatgc cactcaatac 5641 ggttgtagac cctattgttc aaatgtggtc ctgcaaagac tgtggtaata acagctctga 5701 cacagattcg gctatagaga gtattgataa caagactgag atagataaat cattgccggg 5761 cagacgacac aaaaaacgtc gcctacggcg aacacgacaa cctggaaata tgagtgctga 5821 tgaatttaag gtaccgctgc tccctggtgc accagtgata tcgacaagtt cgacagattc 5881 ttgttcctcg agtgatacgt cttcatcgga gacagattcc gaatcgtcgt gttcttcatc 5941 gtcctctgat gaatcatcca acggtgaaga atcattggca acgtgtgaag tctgtttacg 6001 tccacataat cgtaatctca ataatgtgcc cgaattattt ctacaatgtt atacttgtag 6061 acgaagagtt caccccagct gcattgaaat gccacatcgc atgagtttac gcgttcgaaa 6121 ttacaattgg caatgcgccg attgtaaatg ctgtgtgaag tgcaaacgtc gacatgatca 6181 aaataaaatg ttgttctgcg aacaatgtga cagaggtttt cacatatatt gtcttggaat 6241 taagaccgtt cctgacggtc gttggagctg taaccgttgt agtatttgta tgcgttgcgg 6301 ggcaacgaca ccagagggct tatctcacat gcatcagcta ataaatacgg cgcagggaga 6361 acatgtgaaa caaactaagc aaaagaaggc caagtgggtt aatgaatatc gtttggatca 6421 cttaactaag ataaaggaac attgttctat gttatgcatt ccttgtggaa aaatgaaaaa 6481 ttccaaacgc gcgcaaaatg tagcacacaa taacgctacg acaaaagcaa catcgccgtg 6541 ctcccttagt gaatctagtt ctaacagctt tatcaattac cccccacctt cagccatctc 6601 atcacaaaaa cttttgcctt ctccaaatgc aacatcaaat ggcgaattaa tgcacagtag 6661 cactgtaaag gaaagtagcg gtcatgctgc gccttcgact tccataccaa ctgaagattc 6721 gtacttctcg gataataaag attctgaaag gtactcgccc gtaccaagca gttttacgtc 6781 atctataata gctgcaagca atacacaaat gacaactacg cacaacgcaa ctggcggccc 6841 tcctcctgtg gttgcctgag taggggtaat acgtttttgt ccaaagctgc aaccaccgcc 6901 acaaacgcct tttttaaata taccgaattt atagcagttg taaacaaagt aaactctact 6961 ggctgctaaa tacatttgga aatatcagga ggtagtttta ttttaaattt attcgtatgt 7021 ttctttttct ccataaaata atttaatctg cattttttac tcgtattgta tggcttactt 7081 cacaaagtag aaactgacat tctaaccaaa ggtgtaaaca aatgttttca tttataattt 7141 accaggatgt tggaaatggc taaaagatac aatatgataa ttaacatatt ttaaaatgat 7201 aaaaattaag aaattagaga tgtatccctt ctataatttt aaatttattt tacgtctcaa 7261 gcatttgcct gatcgacatt acaaacacgt agtctctttt gatgtttgat tctttaagta 7321 aggcatccga aatttatttt tataaataca tcatctttca ttagataatt tttaaataga 7381 tatttataaa ttgtttaatt aaactttatt tctaatcatt tcgcgtatta ttttttgttt 7441 cgtctaattt aattttttac tctaaggtta atatatatac ataattaaga aaaccgtgtg 7501 gcttgtgttt tgtcaattga atgtgttaat actgtccaca aaaattactg ttcaagatgc 7561 cgctttcttt cttttcttat tttcagcgtc acgtcatttg gccgtttatt tcatttaagc 7621 aggccattgc ttttttcgta tcatcattct cttcgtagca taaagatcga aatgaaggaa 7681 taaatagagg tgcattacac tcatcacctt ttaaacacgt caaattcggt gttatttaaa 7741 ctcaaaattt gccctaaatc atccatcctt aaacagttat cgaaaattcg aatgagaaga 7801 attttgatta aaagttattt ttggcagcat tttctttttg aattaatccc aaaaaacgca 7861 ataacttctg ttatttggat ataagaaaat tctatttcaa tagaccataa cattatagat 7921 ttataatttt tatttttcaa ataataacaa atactgtatt tattgacgca atccatatgt 7981 aaacacacca aaagtgaaaa cctttaaaaa actatactta tgaaagaagg aaaaacattt 8041 atattactga atgtactaaa tatttgtaaa ataaaatgtt ccttagcata ggacacaatt 8101 caaacgatag actaataaaa aagaaacaat ttatgcaatg aagtaaa