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LOCUS XM_059367670 6131 bp mRNA linear INV 02-SEP-2023 (LOC106081420), transcript variant X5, mRNA. ACCESSION XM_059367670 VERSION XM_059367670.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6131 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6131 /gene="LOC106081420" /note="uncharacterized LOC106081420; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106081420" CDS 275..5911 /gene="LOC106081420" /codon_start=1 /product="uncharacterized protein LOC106081420 isoform X3" /protein_id="XP_059223653.1" /db_xref="GeneID:106081420" /translation="MASPMSPTNIYRQNMDNPQHGSHVVSNHNGYIQQSPVRYYHTGT VQNTNERSKLIEMLRTPNILTSPTIEPSSKGLLNGPGQNNCFLNCAVQVLWHLDAFRR SFRSLNQHVCSGQDCIFCALKELFQQLQTSSEPALCPEPLRRALASGPLAGRRFPLGC LGDAAECFELLLHRVHSHISSDDGDACESQACIAHRRFAMRVIEQSVCKCGANSEQLP FTQMVHYVSASALTSQNSLALQNHQQLTFGQLLRAAGNMGDIRDCPSSCGAKIGICRA LLNRPDVVSIGIVWDSERPAADQVHSVLKAVGTSLRLSDVFHQVSEQRWAQTVQHELV GIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGPHWEGVVDKCSRGRYQPLLLLYAV PQPQQQSSANCPTQVSTSQYMHDTQSPAVRRAITPSPEKPQMGNTRRAITPTPLRMPN DYQNLSVIQKNIFPSGGGQHQQPPQVSEKHGAHLNTDETDSYISRKTVEHVLNAQYQN LSIIQDKIFPQDEKDVAVLNNYQQRKSLEAVLNAQLARKHQQHLQLQRSHSAESGHVS GSSASSTTSSTNSSSPPSDGLTIPEHLNQPRRRDSGNWSGDRNSASSASSTTLDNPYL YMVGKRSGAAVPQSPTRNGLPYDPGYDSFSLSSTDSYPPKHPLNPQLAKIPESSPSVV LTGDCEKLCHEADQLLEKSRILEEALDLETALVLCNAAAGRARAAMDAPYSNPHTMTF ARMKHNTCVMRARSLHRRILLEKGAEMDAMPEMKHMREGSTSSVIKHVRQNSKDKTLD GNNGGNNSSPTANNPNKSIEIYATLPKKKSPLKALVSASLASNDTDNIEFEATQVTPK PERESRSLFGRSSNKQQEKDKRSRSEDRNKISREFSLTETLLVNAKDTLKKHKEDKDE KKEKDKNGKKQHKIRRKLLMGGLIRRKNRSMPDLTEAGDETSNAQQAVANPPPLTSSV DDSVVGLQHANSMSGYISEGHFDFRDSTGTSSNGVNANPNLERSKLMRKSFHGSGRQL TVVAKVQPPPPPMRTSSTLTQQQLQQQLALQQQQDAALMQHFHHEATLSNISAMSSNT SISEDSCQTIITTCAQVHSEQSPLAKEQMYQQAYKASTEQGTDEVDGIPANANHQHAR QDSQEFPPPPPPLELPPYPSPPHSVSHSRQASEDFPPPPPEIDMEPLNQQINQIQALE AANKQQQHQRNMESMEGTTSILAQLQQRQHLMKMRKEHGNTPTFMQGNQNENSWLREL QLKQLQRQPDLTNVQSIAQRYEQHQQNHQSPSPMRAFGSQELLNVKSQPLRNGGHQRP DSDEVDCLPQRPPLPPQALQQRQQLQQQLQAKQMSSILPKPKYDISQTQIAEEIREVE LLNNMVQQTLNNNPSQPAATNNNAAPKRVKKKSVSFCDQVILVATADNEEDDDFIPNP ILERVLRTAQSPNDKVTAQMIQQQQQNIMRLQTEAPSRAVQSQQQLGLTAQMQQQQQH QQLGPHSPLTQNQQQQQMAQPSPLLGTERRNVGLSGPQEMQRYVQLQRPQLEALRLQQ QQIQQQHQQQMQQQHHQQMQLQQMQQKPQLQAGQVYTPIQDIYRMQQQQQQQQQQQQQ LTASNTLSSHLNETSAQNSLQSRTSMSGIANVAASQHMQMLATHTTQNQLQQQQQQQQ HHLPQNYSLPRLGNAQAPTNYYPGIAGLEQPPPSQQHIPSPYQRVPLPHGYPGLAEPA TLLNRPPHLINPQNPSNVHPGSPYMSIPSNSQIAQNQPVKAKKVSFEPGTKGDASEAT PNSSTLPPKTMLQQHGLPLPAQQAAASNGLPPPATSDGSNVNVTAIPTRVYNNAIVKA SAKASECNLCRKRHVIAPQQYCTNCEYYLKMLNNRR" polyA_site 6131 /gene="LOC106081420" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gctacggtag agttcattca ttcacagttg caacgtaccg aagtctgaat ataataaaga 61 gtggttaatt gtagacacaa ttaaccacta gttaagtagt ccaaaaatat agattttttt 121 tttatctaaa ttggtggaaa ataattaaaa gtacttaatt gtgttcctat gaagacccga 181 actgttatta cgaataaaaa tcaatatgtc tgtcataaag taaactgttg cacttccaac 241 cattttgaac acattttgat ttagtaagac caaaatggct tcaccaatgt cgcccaccaa 301 tatatatcga caaaacatgg ataatcctca gcatggatca catgttgtct caaaccacaa 361 tggttatata caacaatcgc cagtcagata ttatcacacg ggaactgtgc agaatacaaa 421 tgaacgctcc aaacttattg aaatgctgag aacaccgaat attttgacat cacccaccat 481 tgaaccatca tcaaaaggcc tactaaatgg accaggtcaa aacaattgtt ttctcaattg 541 tgctgttcag gtcctgtggc atttagatgc ttttcgacga tcatttcgtt ctttgaatca 601 acatgtatgc agtggccaag actgcatttt ctgtgctcta aaggaactgt ttcaacaatt 661 acaaactagc tcggagccgg ccttatgccc tgaacccttg cgtcgtgcct tagcctctgg 721 tcccttggct gggcgccgct ttcctttggg atgtttaggc gatgctgccg aatgttttga 781 gctgctattg catcgtgtac actctcatat ctcctcggat gatggtgatg cctgcgaatc 841 acaggcctgt attgcccata ggcgttttgc tatgcgtgtt atagagcaaa gtgtttgcaa 901 atgtggtgcc aattcagagc agttgccatt tacacagatg gtccattatg tgtcggcttc 961 ggcattgact tcacaaaatt cattggcttt gcagaatcat cagcagttga cttttggcca 1021 actgttaagg gcagcaggaa atatgggtga catacgcgat tgtccgagtt cctgtggtgc 1081 caaaattggc atttgtcgtg ccttgctgaa ccgccccgac gtagtgtcca ttggcattgt 1141 ttgggactcg gaaaggcctg ctgccgatca ggttcattcg gttttgaaag ccgtaggcac 1201 cagccttcgt ttgtccgatg tcttccatca ggtcagcgag caaagatggg ctcaaacggt 1261 acagcacgag ctagtgggca ttgtttcata ttatggcaag cattacacca ccttcttctt 1321 ccataccaaa ctcaaggttt gggtttattt cgatgatgcc aatgttaaag aggttggccc 1381 ccattgggaa ggtgttgtgg ataaatgcag tcgtgggcgc tatcaaccgt tactgctact 1441 ctatgccgta ccccagcccc aacaacaatc ttcggcaaat tgtcctactc aagtgtctac 1501 gagccagtac atgcatgaca ctcaatcgcc agcagtgcgc cgagctataa ctcccagtcc 1561 cgagaaaccg caaatgggca atactagacg tgccattacc cccacgccat tgcgcatgcc 1621 caatgactac caaaacttga gtgttataca aaagaatatc tttccctcgg ggggaggcca 1681 acatcagcag ccacctcaag tatcggaaaa acatggagcc cacttgaata cagacgagac 1741 cgactcctat atcagccgca aaacagtgga gcatgtcctc aatgcccaat atcagaattt 1801 gagtattatt caggataaaa tatttccaca agatgagaag gatgttgccg tgctgaataa 1861 ctaccagcaa cgtaaatcat tggaggcggt attgaatgct cagttggcac gtaaacatca 1921 acaacatttg cagctgcaaa gatcgcatag tgccgagtcg ggtcatgttt ctggctcgtc 1981 tgcctcctcg accacatctt ccactaacag ctcatcgcct cccagtgatg gtttgaccat 2041 acccgaacac ttaaatcagc cacgacgtcg tgattcgggt aattggtctg gagatcgcaa 2101 ttccgcaagt tctgcttctt caaccacttt ggacaatccc tatctgtata tggtgggcaa 2161 acgttcgggg gctgctgttc cgcaaagtcc cacacgcaat ggtttgcctt atgatccagg 2221 ctacgactct ttctcgctga gctccaccga ctcgtatcca cctaaacatc ctttgaatcc 2281 ccaactggcc aaaataccag agtcatctcc ctcggttgta ctcactggag actgtgaaaa 2341 gttatgtcac gaagccgatc aattgctgga gaaatcacgt atcctagaag aggcgcttga 2401 cttggaaaca gcactggtcc tttgcaatgc cgctgccggt agggctcgag cagccatgga 2461 tgctccttac agcaatcctc ataccatgac ttttgctcgc atgaagcaca atacctgtgt 2521 gatgagggct cgttccttgc atagacgcat tttgctggag aagggagcgg aaatggatgc 2581 catgcctgaa atgaagcaca tgcgtgaggg cagcaccagc agtgtcatta agcacgtgcg 2641 ccaaaatagc aaagacaaga ctctagatgg caataatggt ggcaacaaca gttctcctac 2701 tgccaacaat cccaacaaat ccatagaaat atatgcgact ttgcccaaaa agaagagtcc 2761 cttgaaggct ttggtctcgg cttccttagc ctccaatgat accgataata ttgagtttga 2821 agcaacacag gttactccta agcccgagag ggaaagtcgc tctttattcg ggcgtagcag 2881 caataagcaa caggagaagg acaagcgaag tcgcagtgaa gatcgcaata agatcagccg 2941 ggagttttct cttactgaaa ccttgctggt caatgctaaa gacactttga agaaacacaa 3001 ggaggataag gatgagaaaa aggagaagga caaaaatggc aagaagcagc ataagatacg 3061 acgcaagttg ttaatgggtg gtttgatacg acgcaagaac cgttccatgc ccgacttgac 3121 ggaggctgga gatgagacta gtaatgctca acaggccgtc gccaatccac ctcccctaac 3181 cagttctgtg gatgactcag tggtcggttt gcaacatgcc aactccatga gtggatacat 3241 atcggagggt cactttgact tccgcgatag cacagggacc tcctcgaatg gggtcaatgc 3301 caatcccaat ttggaacgca gcaagctaat gcgtaaaagt ttccatggaa gcggacgtca 3361 attgacagtg gtggcgaaag tacagcctcc accaccaccc atgcgtacat cctcgacctt 3421 aacgcagcag cagttgcaac aacagcttgc tttgcagcaa cagcaagatg ccgccttaat 3481 gcaacacttc catcacgagg cgactctctc caatatatcg gccatgagtt cgaatacctc 3541 aataagtgag gattcgtgtc agaccatcat taccacctgc gctcaagttc actccgaaca 3601 aagccctttg gccaaggaac aaatgtatca acaagcctat aaggcttcga ccgagcaggg 3661 cacagatgaa gttgatggca ttcccgccaa cgcgaatcat caacatgcgc gtcaagattc 3721 acaagaattc cccccacccc cgcctccatt ggaactacca ccgtatccta gtccaccgca 3781 cagtgtgagc cattccaggc aagccagtga agattttcca ccaccacctc ctgaaatcga 3841 tatggagccg ttgaatcaac aaatcaatca aatccaagcc ctagaagcgg ccaacaagca 3901 acaacagcac cagagaaata tggagtccat ggagggtacc accagcattt tggctcagct 3961 gcagcaacgg caacatttaa tgaaaatgcg caaagaacat ggcaatactc ccacttttat 4021 gcagggcaac cagaatgaga actcttggtt aagggaattg caattgaagc aattacagcg 4081 ccaacctgat ttaaccaacg ttcaatcgat tgctcaacgc tatgagcaac atcagcaaaa 4141 tcaccaatca cccagtccca tgagggcttt tgggtcccaa gaattgctga atgtaaagtc 4201 gcagccattg cgtaatggtg gacaccaaag acctgatagt gatgaggtgg attgtctgcc 4261 gcaaaggcct cctctgccac cacaagctct acaacagagg caacaactac agcagcaact 4321 ccaagcaaaa cagatgtcct ccatattacc taagcccaaa tatgatatat cccaaacaca 4381 aatcgccgag gaaatccggg aagtggagct tcttaacaac atggtgcaac agacgctaaa 4441 taacaatccc tcccaaccag ctgccactaa caacaacgcc gctcccaaac gggtaaagaa 4501 gaagagtgta tcgttctgtg atcaagtgat actggtggca accgccgaca atgaggaaga 4561 tgatgatttt atacccaatc ccattttgga aagagtccta aggaccgctc agagtcccaa 4621 tgacaaagtg acggcacaga tgatacaaca gcaacaacaa aatatcatga ggctacagac 4681 ggaggcaccc agccgcgcag tacaatcgca acagcagttg ggtttgaccg cacaaatgca 4741 gcaacagcag cagcatcaac aactagggcc acattcaccg cttacacaaa atcagcaaca 4801 acagcaaatg gctcaaccat cgcccttgtt aggaacggag agaagaaatg ttggcctttc 4861 gggtccacag gaaatgcaac gttatgtgca gttgcaaaga cctcaattgg aggctttgcg 4921 cctgcagcaa caacaaatcc agcagcagca tcaacaacag atgcaacagc agcatcatca 4981 gcaaatgcag ctacaacaaa tgcagcaaaa gcctcaactg caggcaggcc aagtttacac 5041 acccatccag gatatttatc gcatgcaaca gcagcaacaa caacaacaac agcaacagca 5101 gcagttaact gcaagcaata ctttatcctc gcatctcaat gaaacatccg cccaaaattc 5161 cctgcaatca cgcaccagta tgagcggcat cgctaatgtt gccgcgtcgc aacatatgca 5221 gatgttggca acgcatacaa cacaaaatca acttcagcag caacaacaac aacaacaaca 5281 tcacctgccc caaaactatt cactgcccag attgggcaat gcccaagcac ccactaatta 5341 ttatcctggc attgcaggtc tagaacagcc tccgccaagc caacaacaca taccctcgcc 5401 ctatcaaaga gtacccctac cccatggcta tcctggcctt gctgagcctg cgacactctt 5461 aaatcgtccc ccacatctaa ttaatcccca aaacccatcc aacgtccatc ctggaagtcc 5521 ctacatgtcc ataccttcca actcgcaaat agcacaaaat cagccggtca aagcgaagaa 5581 ggtgagcttt gaacctggca ccaaaggaga cgccagcgaa gccacaccca attcaagcac 5641 gcttccgccc aagaccatgt tgcaacaaca tggtttaccc ctacccgccc aacaagctgc 5701 agcatccaac ggtctgccac caccagccac cagcgatggc agcaatgtga acgtaactgc 5761 catacccact cgtgtctaca acaatgccat cgtaaaagct tcagccaaag cttcggagtg 5821 caatttgtgt cgcaagcgtc atgtcatagc cccccaacag tactgtacca actgcgagta 5881 ctacttgaag atgttgaaca atcggagata gaaaccagag aacacaaaag ctgcagtttg 5941 ataacaaaaa aagaaagttc aaactctcga agtaatggtt aacggaggca ttgctttgca 6001 tttttcatgt aaacgaaagc atttcatata tgttattgaa aatcgtcctt ttagtcctta 6061 agctcaccaa taagttgtag tttttaatgc tagttcttta ggtgttttga aaagaatctc 6121 atatgatgct a