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LOCUS XM_059367647 5957 bp mRNA linear INV 02-SEP-2023 (LOC106087731), mRNA. ACCESSION XM_059367647 VERSION XM_059367647.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; corrected model; includes ab initio. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..5957 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5957 /gene="LOC106087731" /note="uncharacterized LOC106087731; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106087731" CDS 2778..5627 /gene="LOC106087731" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon" /codon_start=1 /transl_except=(pos:4113..4115,aa:OTHER) /product="LOW QUALITY PROTEIN: uncharacterized protein LOC106087731" /protein_id="XP_059223630.1" /db_xref="GeneID:106087731" /translation="MAGPQVQRPASAYYTGLNGSSNGGHHGNNGAGAGANGAGGGLVT STSHHTGLHTIRTISHDSELIYRGSAANASNGTHLTHNPSNVSHNSAGGGGIGASSQT SLPRDTCTASTSRSVIQTQPGPGSSIGSISGGGGLGGSSTINISSIAGTGQNPNDALI VPVTTALTKSSSQHSHSHSLQASNREKQRSIEIIVDASKCGSEVDDLKGEEDDVEQGK SRRSSRHRHRPLHRRLMTYLRSLFHRSTTQTDSELEEFETPARYRPDSLSALSRATRF TEDEIKRIYRGFKAECPTGVVKEDTFKVIYSQFFPQGANPTLYAHYVFNTLDQDHTGI VSFEDFVQGLSILSRGSVEEKLRWTFQLYDINGDGYITREEMTDIVTAIYELMGRLPD ELPEEEKIKGKVERIFQKMDINRDGVVTLEEFLEACHNDEAISRSMSVFDSAFXPYPP KEYELKKSSSTHTAKKTKSLVDNRRKGGHSRYEDRKHKQIKALREQRKQQKLKEKYTE GHDGGGDGYNEDDEDREIEEVLNITIHSEEKLNDAAYCRNGDDEDEVEENVGSFAIDD VATSDSDLSESEHSFCRHCLRPQSDLQLRYMRPRQRSKLRHSQQAKRERSKSRYSGGN CGGGKGGGGGGSNGGGGNGGDHQHHSKTRKKRSKSRAKRARNGKHSSSGHNNRKEQQR HHHHHHQQHQQKHKLPLIRDLNAANEQAIRFRCPQVGPQVGRDRQMPPLLHFHHPQHV QQHLTAYQQHYPHPIYTQAQTTNEQQLQQTGCKHHSPTSHTTLIMESDLKQQQQQRSP PPHNQKSNQTPQDGQDNTTIDIGGPDAAATTTGLGNCTHPPNPNCQQPGSVPGLCHCQ LAMVGATNQTIPNASTSTRPTLPQLPLTNLESGGPSTVVIASRGQSPNGNVATTSTGA MDATVAVVAAATTPESPSLVKVSTWYTVAKQGVSC" ORIGIN 1 aagaaaaaaa atcatacatg tagatatata taaagaaaga atacaattaa aatatttttc 61 aaatatttat tgttgttaca tggttaatga ttgtaaaatc caatacaagg agaattgtta 121 aaaattaaaa aaaaaagttt taaatattga aagaaataaa gatatataaa aaaaaataca 181 aaattagtgt taaaccttta tccctcttta ccctaaaagt agaaaaagtg aaaaatttaa 241 aagaaaaaaa atattgttta aaaaaattca aattaaatat ttaaactcgt ttaatggaga 301 aaagttgaaa aaagagaaaa attatataga atagaaagtt tcaagtaaac caccaccact 361 atacatcatt aacgtcatct gtgttgccgt cgtcgtcaac cttttctgga gcatgtaaat 421 aaaagccata aaaatcatta agcaacaagg agcacacaaa cacttaaata tatacacaca 481 cacacacata catagataga ctcagctacg gaggcagcct ggaattgtat acgtgcgctg 541 tatatttcag atatttgtgt gtgtgtgtgt ttgtatgctg gtatataaat atgttaccac 601 aaactaagtt gtaaaaataa tatacgaaaa agttaaatgg attaaatgag agaaacaaaa 661 accagccacc aagtcaacca aacaaccaca caaccaaaca agacaagtcc agcccactta 721 atccccagca aattccatca actgcaaaaa ctaatttacg actaaagaaa accaaataaa 781 accgcaatat gtttataaaa tgtagtaaat tttgccaaaa ctataaccaa caaaaaaggc 841 agcaacaaca ctaaaaccac ccccccccaa aaacttaatt gaaatattaa taatgtttca 901 gctgccaata tagagaaaag tagcaagcaa aaaacggaat taataacaaa aaccaaagaa 961 aaaaagttca agtaaataaa aataattccc agaaatgcaa taaccttaag gcgattaact 1021 acaacagcca taaacaatta tcgtcctccc aaaagagcaa acagtagaaa caacaacaac 1081 aacaaaaccc cagtgaaaaa aaaaacaaac aacaacgcaa cagagagtgt tataaactaa 1141 ttggaatatt tttaattaat taattaatca gccaagagca agggcataaa aaaggtctct 1201 ggcaaaaata ttttccctgg gggtcaaaca gtaagactcg ccactcagag aaatccaaac 1261 cctttcgctc tctgtctctc tctgtctccc acactaggga acgcattaaa attgaaatat 1321 gaactgagtt tgtttggctg gcccagctcc atcgaaatcg caacgaatcg atttgaggcg 1381 cgtaaatggc atgccgcgta taacagttag tcgctgttca ctaattgcca ataaattgct 1441 cattgctgtt aattgcagct aataaatcgt tgcttcgcat ttgtcgttct tcaattaagt 1501 taaagcgcgt cagtgagtgt gcgttcgtgt gtgtgtgtgc gtacgttcgt gccttcgttt 1561 gtgccagtta ttggtatatt ctcgttatcg gtatcggttt tgtcctttgc ttcgcgtgtt 1621 gttttggtgt tgttcattta ttgtaaaacc tattacactc tctgttgttg tatcactctc 1681 ccactctctg tcgctctctc tccctccata aaaacgtaca atttattatt gtttttctag 1741 tcagttgata gtggcgacta ctgctgctac agctactgct actgctgttg tatatttagt 1801 gcacaatttg acaaattgca tatttgtact tcgttttttt ttattcttct atatatgact 1861 gggcacaaca gaaacttgtc attgtgtgca tgactttatg tttctctcat acgtacgcct 1921 gctatagtgt atgtgtgtgt agtatatcta tgacgtcttc gctttatagt ggcgccatag 1981 gaaattttat cactggtcgt cgtgcataac cgaagtccaa gttacaaaaa aaaaacacaa 2041 cacaatgaaa atgctgttta gaaaatataa tcgctaaccc aacaaaagct aaactagcgc 2101 tcaagattta actgtctgta tgtttgtgtg tgtgtgtctc agtattgtct taacaagcga 2161 taaaaaactc tatgtctaac accttgaatt actaacacca ataaacaaag ctaacaaacg 2221 cagtagtcaa accaaaaggc gccacatcag caactaatac cagcaaaaca acaaaagcag 2281 ctgccaaaga gcaacacagg ggacatattt ttacccaaaa aataaaatgc ttaacaaatc 2341 aatatgcaaa tttactaaaa atagtgccaa accaaagtat gttgtacctg aaaattgtaa 2401 aatttaatta aacaaagaat tctagataat tgaaagatga agagaacaaa atgatttata 2461 aatagtgtgt ggacaacaag tagaagtacc atacccctcc tagatacaac cattgatccc 2521 ctccaaaaaa aaaagagaga aagaagacga caacaaaacg gaggccattg ttcaaatccc 2581 cttcaaatcc catccagtag cagtagtagc ctacagaaga agaacgaaga aatttcacaa 2641 aacaaaaatc aatttgtgtt ccattagaaa ataagcgttt aaaagccaac gggaaaaaac 2701 caaaaaaaaa aaaaagagga ccaaaaccaa catttcaaaa gacttggttg ctgcagcaaa 2761 ttgtaattga agttgccatg gcaggtccac aagtacaacg tcctgccagc gcctactaca 2821 ccggcttaaa tggctcttcc aatggaggtc atcatggcaa taatggagcc ggtgctggtg 2881 ccaacggcgc tggtgggggt ttggtcacca gcacttcgca tcacacggga ttgcacacca 2941 tacgcaccat atcacacgac agcgagttaa tctatcgcgg tagtgcggcc aacgcctcca 3001 atggcacgca tctgacgcat aatcccagca atgtcagcca taatagtgca ggcggtggtg 3061 gcattggcgc ctcctcccag acatcattgc cgcgcgacac ttgcacggcc agcaccagtc 3121 gctcggtaat ccaaacacaa cccggcccag gttcatcaat aggcagcata tcgggtggag 3181 gcggcctggg aggcagcagc accataaata tctcctctat agctggtacg gggcaaaatc 3241 ccaatgatgc tttaattgtt cctgtgacaa cagcactgac caaatcgtca tcacagcatt 3301 cgcattcgca ttcccttcaa gcttccaatc gcgagaaaca acgcagcata gaaatcattg 3361 tcgatgcttc aaagtgtggc agtgaagtgg acgacttaaa gggcgaagaa gatgatgtgg 3421 agcagggcaa atcgaggcgt tcatcgaggc atcgtcatcg gccgttgcat cgaagactga 3481 tgacctatct gaggagttta tttcacagaa gtaccacaca aactgattcc gaacttgaag 3541 aatttgaaac accagctcgt tatcgccccg actcgctcag tgccttgagt cgggccaccc 3601 gctttacaga ggatgaaatc aagcgaattt atcgcggttt taaggctgag tgtcccacgg 3661 gcgtagtcaa ggaggacacc ttcaaagtga tctattcgca attcttccca cagggagcaa 3721 atccaacatt atatgcccat tatgtattca atacactgga tcaggatcac acgggaattg 3781 ttagttttga ggattttgtt caaggacttt cgatattgtc gcgcggttcc gtggaggaga 3841 aattacgttg gacttttcaa ttatatgaca tcaatggtga tggctatata acacgggaag 3901 aaatgactga tattgtgact gccatttatg aactgatggg acgtctgccc gatgagctgc 3961 ccgaggagga gaaaatcaaa ggaaaggtgg agcgaatatt tcagaaaatg gacataaatc 4021 gtgatggggt agtgacattg gaggaattcc tggaggcttg tcacaatgac gaagccatct 4081 cgagatcaat gtcggtcttt gattccgcat tctgaccata tccgcccaag gaatatgaat 4141 tgaaaaaatc atcatccaca catacagcca agaagaccaa aagtttagtt gataatagac 4201 gcaaaggagg acattcacga tacgaggata ggaaacacaa acaaattaaa gctttgagag 4261 aacaacgaaa acaacaaaaa cttaaagaga aatacacgga gggacatgat ggaggaggcg 4321 atggctacaa tgaggatgat gaggataggg aaattgagga ggtcttaaac ataaccatac 4381 atagcgaaga aaaacttaat gatgctgcct actgcagaaa tggcgacgat gaggatgagg 4441 tggaggaaaa tgttggaagc tttgcgattg acgatgttgc cacctccgat agcgatttaa 4501 gtgaatcgga gcactccttt tgtcgccatt gtttgcgacc ccaatctgat ttgcaattga 4561 gatatatgcg acctagacaa cgtagcaaac taagacattc acagcaggcg aagagggagc 4621 gcagtaaatc gcgttacagt ggtggcaact gtggtggcgg caagggggga ggaggaggtg 4681 gctccaatgg cggtggcggc aatggcggag accatcaaca tcattcgaaa acgcgtaaga 4741 aacgttccaa gagtcgtgcc aaacgtgccc ggaatggtaa acactccagt agtggccaca 4801 acaatcgcaa ggagcaacaa cggcaccacc accatcatca ccaacagcac caacaaaaac 4861 ataaactgcc attaatacgg gatctaaatg cggccaacga gcaggccata cgtttccgtt 4921 gtcctcaagt gggaccccag gtgggacgtg atcgacaaat gccaccactg ttgcactttc 4981 atcatccgca gcacgtgcaa cagcatctta cagcatatca acagcattac cctcacccta 5041 tttacaccca agcacagacg acaaacgaac agcagctaca gcaaacaggt tgcaagcacc 5101 acagccccac atcacacact acgctgatta tggagagtga cctgaagcag cagcaacagc 5161 aacggtctcc tcctcctcac aatcaaaaat caaatcaaac tccacaagat ggccaagaca 5221 acaccaccat tgatattggt ggcccagatg cagcagcaac aacaactggt cttggcaact 5281 gcactcatcc gccaaatccc aattgtcaac agccagggtc agttcctggc ttgtgtcatt 5341 gccaactagc tatggtggga gccacgaatc aaacaatccc taatgcttcc accagcacaa 5401 gaccaacact accgcaactg ccactaacaa acctggagag cggcggccct tcaacggtgg 5461 tcattgcttc aaggggacaa tctcctaatg gcaatgttgc caccacatca actggggcaa 5521 tggatgcgac agtggcggtt gttgccgcgg ccaccacccc agaatcacct tcgttggtga 5581 aagtgagcac ttggtatacg gttgctaagc aaggtgtctc ttgctaatat tttcccttaa 5641 attggtcgcc aattctaata acacaaagac tactttggta aaaacaaaaa caaacacata 5701 caacaagact tcaacacagt taagaggact ttagttgcaa actccctcta aacgtacaca 5761 cacacacacc caagcacaaa aaatacacaa acaagcgcaa aaggctaaca cgcacacata 5821 gacacatgca ttagttaaga aacgggtttt caaatgacac atttgtttgt ttggaaagtt 5881 ggtacaccga taaaatcgaa acttacttaa ttactcaaag tgattgcgat cggaatatgg 5941 tctaatttga agtcatt