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LOCUS XM_059367591 6227 bp mRNA linear INV 02-SEP-2023 ACCESSION XM_059367591 VERSION XM_059367591.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6227 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6227 /gene="LOC106093061" /note="calpain-C; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106093061" CDS 549..2588 /gene="LOC106093061" /codon_start=1 /product="calpain-C" /protein_id="XP_059223574.1" /db_xref="GeneID:106093061" /translation="MTSKYERIKNECRARNNALWEDPDFPAVQSSVFYYQTPPFTFQW RRISEIADIKNACFVNEAENFDVVPGKMGDRWLVSCLGVLHSLRNLFYRVVPADQSLN KANGVFRFRLWWCGEWVEVLVDDRLPTINGRLAFLQPQSSNCYWASLLEKAIAKLHGS YEALKYGTRSDGLSDLLGGVVECIPIKANSTSELIRPQQLKTHLDTTCIITCIAATSA AVAQHKNTPERLPNGITLNVNYRLCSLDKVETLLGDAVQLVRIKDPLKCNAFANNNDF EGDWSALSSTWERVSVQERDRLFGQLDVGEFWMSFFDFTQTFSSLEVIYLDADTAKDE LSLQDRPKRWQMKMFQGQWKRGVTAGGCRNHESFHINPQLLLNIPEKQEIVVALNQHT AVEPKVIGFTMYKMSGIAGSKVNQKISESLPKDFFKTHVSFLNSDYGNTRHVTCKCQL EVGQYVLMPTTYEPGEESSFTVRILGTVPLRLSLLETQTLMLLDPFPVLKNEADSIKI KNVCQYEPVFMQLADENKTINCFELHELLDACLPNDYIKGCANVDICRQVIALQDKTG TGRINFLQFKTFMVNLKSWQGVFKMYTKEKAGILRAERLRDALYDVGFQLSTDIMNCL MQRFIRKDGTLRLSDFASAVLHLTAAFDYFQRKDHNQDNVIEIEMSDWIKCVLRC" polyA_site 6227 /gene="LOC106093061" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttgccctct tcgctcgcat tctaccatta tttgcgtgtg tgatattatt ttttccattt 61 tattttcgta taactttcac tttgtgtttg gcctgaactg atcgtggtgg tgtgaaattt 121 tggtttgttg ttttctcgaa attttcccaa aacaaggtca ttttcaagtg ttgcaagaat 181 acgtgattaa aaatatccta tttgctggaa aatagaactg caagtgtggt ttggtgttca 241 tctatttgga aattacgtag tctcgagtcg ttctgtggtg gttaatgtgt caatagttac 301 tttaagccaa gtgttaaatt aagccaagca aaataaaaga gggcacacaa aacgacagta 361 taataacaat aaaattgtat tctttggtgg tgcttgtgcg atagaaagaa cgcctacgaa 421 gtttcattgc aaactcataa atatttgaaa taaaaaaatc tcaacaaaca aatcggcaat 481 caagtggcaa gctaaggtgt tcttcgtcca tgtgtttttc gcacgcagca ccttaaacaa 541 gtgtagaaat gacgtcaaaa tatgaacgca tcaaaaacga gtgccgtgcc cgtaacaatg 601 ccttgtggga ggatccagat tttccagccg ttcagtcgtc agtgttttac tatcagactc 661 ccccgtttac gttccagtgg cggcgcatct ccgaaattgc cgatattaaa aacgcctgtt 721 tcgtcaatga ggcggagaat tttgatgtgg tgccgggaaa aatgggcgat cgctggctgg 781 tttcgtgttt gggtgttttg cactctttgc gcaatctctt ttatagagtt gtgccagccg 841 accagagttt gaacaaggcc aatggtgttt ttcgttttcg cctctggtgg tgtggtgaat 901 gggtggaagt gttagtggac gatcgattgc ccacaatcaa tggccgcttg gcttttttac 961 agccccaaag ctcaaattgt tattgggcct cgttgttgga gaaggcaatc gccaaattgc 1021 atggttctta tgaggccctc aagtacggca ctcgctccga tggcctcagt gatctgctgg 1081 gcggagtagt ggagtgcata cccatcaaag ccaacagtac atcggaattg atacgcccgc 1141 aacagcttaa gacacatttg gatacgacat gcattataac gtgtatagca gccacaagtg 1201 cagcagtggc tcagcataaa aacactcctg agcgtttgcc aaatggcata acacttaatg 1261 ttaactacag gctatgttcc ctggataaag tggaaacttt gctgggtgac gcagttcaat 1321 tggtgcgtat caaggatccc ctcaaatgca atgctttcgc aaacaataac gattttgaag 1381 gcgattggtc tgctttgtca tcgacatggg aacgtgtttc ggtgcaagaa cgtgatcgat 1441 tatttggaca gctagatgtt ggcgaatttt ggatgtcatt cttcgatttc acgcaaacat 1501 tttccagctt agaagttatc tacttagatg ccgacactgc aaaagatgag ctatcactgc 1561 aggatcgacc aaagagatgg caaatgaaaa tgttccaggg acaatggaaa cgtggcgtta 1621 cggctggcgg ttgccgtaac catgaatcgt ttcacatcaa cccacagctg ctgcttaaca 1681 taccggaaaa acaggaaatt gtggtggcgc ttaatcagca cacggccgtt gagccaaaag 1741 tcattggatt taccatgtac aaaatgagtg gaattgcagg ttcaaaggtt aatcaaaaga 1801 tcagcgaaag tttacccaaa gattttttca aaacccatgt cagtttcctg aattcggact 1861 atggcaacac acggcatgtc acctgcaaat gtcaactgga agttggccag tacgtactga 1921 tgcccacgac atacgagcca ggggaggagt ctagctttac ggtacgtata cttgggacgg 1981 tgcccctgcg actttcgcta ttggaaacac agactcttat gttgttggat ccgtttccgg 2041 tgctcaagaa tgaagccgat tcaatcaaaa tcaaaaatgt ctgccagtat gagccggttt 2101 tcatgcaatt agccgacgag aataaaacca taaactgttt cgagctccat gaactcctag 2161 acgcctgcct tcccaatgac tacatcaagg gatgcgccaa tgtggatatc tgccggcaag 2221 tcattgccct tcaggataaa acaggcacgg gtcgcattaa ttttctgcaa ttcaaaacat 2281 tcatggtcaa tctaaagtcg tggcaaggcg tttttaaaat gtacaccaaa gagaaagccg 2341 gtatcctacg cgccgaacgt cttagagacg ccctttacga tgttggcttc cagttgagca 2401 ccgacattat gaactgccta atgcagcgtt tcatacgcaa agatggcaca ctgcgactta 2461 gcgattttgc atcggctgta ctgcatttaa cagcagcatt tgactacttt caacgcaagg 2521 atcataatca ggataatgtc attgagatcg aaatgtccga ttggataaaa tgtgtcttgc 2581 gttgctaaca aaacgccgct catacggcgc ttgtcttcgt agaactgcag tagttaaatt 2641 aaatctgatg cgcttaccag ccgaaggcgc agcacaccaa aatagtctaa tttagtgtat 2701 agaaaaccat ttttctaatc ttaaggaccc atgatgactt atttctttta cgattattta 2761 atttcatctc atcatcctcg agtgtgctat attgagccaa tagtagtttt cttttttact 2821 ctcaaacatc atacgagaat ctacgaatcc cgaaacacca aaagctatct tctaaagacc 2881 aggactaaat tccgaaagaa acctactaaa tttctcctaa aacgaaatga gtgtaaaaaa 2941 agatactatt cttaaattaa gtttaaagta tttcaaaatt aaaatgtata ctatatatat 3001 atatatattt tgtttcgtgt tgctattaaa aatagaatta acaaaaaaaa attctaaaag 3061 taagacaatg tgtgctgtct tcgaatgttc atgcccaagt gaaaactgat ctgttatttt 3121 gattattttt ttgcaatttg ttaattgacg ttgattatag tatgtatata ccatttaaaa 3181 tagtaaagtt taactacttt aaacaaaatt aaaaaggaca ccctttgaac ttaataatct 3241 aatcgctcct agagcttatt aggtcaagtc aagggatttg ttcgtctggg gtctaaatca 3301 tcacatgatg gatagtgata ataacaattt aactgaaaat gctgactgga tttgtcttgt 3361 atttatattg ctaaggcttt aatttataac gatttaattg gcaaccattt tttatatagg 3421 taacagaatt ggaagtgtca caatcatgag cgtaccgaag aggctcagga atgaggcctg 3481 aatccgaggg tggtccacta gctctacagg agcgtaatta gaccaaatag tttggtggac 3541 tgcgatttag aaaaagtgca atgtatagat aatacaacag gttcagagaa catgttgttg 3601 tttcagcagt gtgtaacaca ctgaggcagc agcccttgct gatgaagaac tacatcgagt 3661 caatacggta cgtacaaccg gctgccatgg gattggagaa catgttgtct tggcataggc 3721 ggagcgatga ggaccacgcc cactagggca ctggagacta ttctagatat ccggcccaga 3781 catacagatt aagtgtgagg cagccactgc ggctatgaga cttaaggcga tggaagagtg 3841 gataggggat aagagcaggt cataccatag tggcataatc gaggcgacta taggaaacct 3901 ggaaggactg aaatatgttt tcgatcagat acctgagacc acacttgatg cgatcacggt 3961 cttgggctaa gtcgacggac gctaggacga cgaaggtcct atggggagat tcagattgtg 4021 agaagacaag gctattactg aaagtaagca ggcaatacct ttcggtatca taacaggaca 4081 cataggaata cgagcccact tatgcaaaat cggtgcggca agtgatggca tgttgggaag 4141 atgatgagac atttgttttc tacaccggcg cttagttggg gacacaacaa tagacatgaa 4201 ccaactttgg ggcctggtat ggagaacaat tagggatttt gcaagtagca cggaattcct 4261 gacttaggtt ttatttttcg aggttacttt tttagtaatt ggagcgcaca acaagccaat 4321 gactggctta ggtgtatgtc catagtgtca tggggcggat taatatccac accctctttt 4381 caaactaact taacctaaca gatcacagtg ataccagtga tacgttagag caagtagttg 4441 aaagatgaaa aaacattcgc acgcaattat ctacgttttc tcctttcttg tgctactaca 4501 atagtttgct tgttttccac ttacgacgga ctacttagtt tttgttattg taaccacatt 4561 tgaatgatgt ggtagcgatc ctcgttaagc tcgtataggt gagaaagttc gttccgttgc 4621 ataggaacgg tgggcgtgtt atactgttag gcgaaacggc agggtataag gggcgtaact 4681 tactacgttg cgggcaatcc caagtccgcc tgtcctatgt actatattca ccctgcggaa 4741 ttttcatgtg catgtacatg cctaggaggt acatctttat tgacgccggt ttgcgcagag 4801 agggagttcg gggttgagac atcacgcctt ttcctggaac ttctgtatac atggatgagt 4861 caaagttgga agaaggcacc gtggcagcag tcttcattgg ggttttagga attaaggttc 4921 gatatcttaa atcttctgaa gccgattggc gatgcagaag cagctacccg attggagtac 4981 cgcgatatat gtcgcgacaa agagcttctt cgagtcatgg gaaaggatat caggctatgc 5041 tgagttccgg gccagtatgg gatcgctaat gtgtactgac catgctgctg aattagtgaa 5101 gtcacctcaa cctagtcgag gtctcaacca agtcagttct cgtggctatt gactaatcca 5161 aggctctcga taacgacatc cacacgtccc accagccgag actgaaataa tggatcttat 5221 acgttgcgaa gcaacttagg gtaaaacagg atgttccctg aaggtgatga gatatctctg 5281 gcacttataa atcaccactt atcaaccgcc aactcctaat ggacgatcgt atcagacgag 5341 cgacccgctg tggagttcgt tgcaaatgag aagaggaaga tgttaactgc ttcatttcaa 5401 ttcacttttt catagagaga tctccagaga cgtaatgttc gatcttcata atctggagcg 5461 agaggttcgg cactataaaa agaggaacaa actcagaaag cgtagccgtt aacctctcac 5521 tatcgcccat cgtctaggat tgatgccaat aagttagatt taaccatatc acgcaccgaa 5581 actatttatc ccatcaaata cagaattcct aggcaaaaga acaatggata aagacaacac 5641 actgtctcgg tatgattcct gctcagccac cccaaccgac cctgtatatt gccccactct 5701 tctgtaagtt attcaatcga attcatgttt ggcaaattat ccttccgtat acactacggc 5761 cgtaagtgaa gcattaaaat agatatatgt atttatttga ttatttgaaa atctgtcaaa 5821 taaacctatt ccaaatcaaa attaagtttt atgaatactg gtgttactgt ttataacttc 5881 ctttatagat gactgtttcc tgtaaaaaaa tattggaaat ctaaatcggg tttagtacca 5941 taaacccaaa tatggaaata tttgtgttaa atttcgaccg gctagcttta ctcgcttggg 6001 tggcagcgat cttttggcag acagacgtaa gggcacagct aaatcggctt agaaacgtta 6061 tgaaaagaat atatgtatat gcgttttagg gtctcagaat aaatatgttt ccacaataaa 6121 attcagagca acaataagaa agcattggta gaaacaaact actcgacaaa caaaaactaa 6181 ataaaagtcc attatttatg gtcaaaatac aaaaaaaaat atttaaa