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LOCUS XM_059367475 2553 bp mRNA linear INV 02-SEP-2023 (LOC106085665), transcript variant X3, mRNA. ACCESSION XM_059367475 VERSION XM_059367475.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2553 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2553 /gene="LOC106085665" /note="ubiquitin-conjugating enzyme E2 Q2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085665" CDS 316..1542 /gene="LOC106085665" /codon_start=1 /product="ubiquitin-conjugating enzyme E2 Q2 isoform X1" /protein_id="XP_059223458.1" /db_xref="GeneID:106085665" /translation="MACLNTLKLEIKTLEKIFTKNHERFQILNSSVDELTCRFIGKSG KRYDIHANITETYPSSPPVWFAESEETSVTNAVQILSNTNGRDNHVINQVGILLRELC RLHNVPLPPDIDNLTIPFQLPPPTSSSSLNQQPAAQHQIEDIESDQDDIEDPIGDSEQ ESEADEDLPLEMDDGRSTNKVSGMFVVGPIESLNFFYFLQKDEMEVEHLATLERLRQS QRQDYLKGSVSGSVQATDRLMKELRDIYRSDSFKSNMYSIELVNDSIYEWNIRLKSVD PDSPLHNDLIMLKEKEGKDSILLNIIFKETYPFEPPFVRVVHPIISGGYVLVGGAICM ELLTKQGWSSAYTVEAVIMQIAATLVKGKARIQFGATKALSQGQYSLARAQQSFKSLV QIHEKNGWFTPPKEDG" polyA_site 2553 /gene="LOC106085665" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agtagtattt ataaaaaaaa atcccaaaga aatagaaatt ggaaatcccc tttcataaat 61 atttgcaaac gacttcaaaa attatgaaga aactggtgat ttctttttac acattgttcg 121 ggtaatttca cagacgacga agtgacgcag gtcagaaaac atcttcccca tttaccttga 181 ttttgccgct gtttcaacgc cgatatatcg cagagacata acgagcgcgt gcgcgtttat 241 tttttggcgt aaaatcgctt cagcgatttg tggcgttttt gtgtaagcaa tatcgtcgac 301 gttgctcaag acaccatggc gtgtctcaac acattgaaat tggaaataaa aaccttggag 361 aaaatcttta ccaagaatca tgaacgcttt caaattctta actcgagtgt ggacgagctg 421 acttgccgtt tcattggaaa aagcggaaaa cgttatgaca ttcatgcaaa tataacggaa 481 acgtatccat catcaccccc agtttggttt gccgaaagtg aagagacaag cgtaacaaat 541 gctgttcaga tactaagcaa tacaaatggt cgtgataacc atgttataaa tcaggttggc 601 atattattgc gagagttatg ccgcctacac aatgttccac tgccgcccga tatagacaac 661 ctcacaatac cgtttcagtt gccaccacct actagttcat catctttgaa tcaacagcct 721 gcagctcagc atcaaatcga agatatcgaa tcagaccaag acgatatcga agatcccata 781 ggggatagtg aacaagaaag cgaagcagat gaagatctac ccttagaaat ggacgatggc 841 cgcagtacga ataaggtaag tggaatgttt gttgttggcc caatagaaag tttaaatttt 901 ttttattttc tacagaagga tgaaatggaa gttgaacatt tagcaacatt ggaaagactg 961 cgtcaaagtc aacgacaaga ctatctaaag ggttcagttt cgggttccgt tcaagcaacc 1021 gatcgtttaa tgaaagaatt acgtgatata tatcgttcag attcgtttaa gagcaatatg 1081 tactccatag aattagtaaa tgactccata tacgaatgga atatacgcct taagtccgtt 1141 gatccagaca gcccactaca caacgatttg attatgctca aagaaaaaga aggcaaagat 1201 agtattcttt taaatattat attcaaagaa acctatccct ttgaaccacc attcgttcgc 1261 gttgtacatc ccataatatc aggtggttat gtcttagtgg gaggggccat ttgcatggaa 1321 ttacttacca aacaaggctg gagttccgca tacacagtgg aagcggttat aatgcaaatt 1381 gcagcaacat tagttaaggg caaagccaga atacaattcg gcgcaactaa ggccttatca 1441 cagggtcagt acagtttggc gagagcgcag cagagtttta aatcccttgt tcagatacat 1501 gagaagaatg gttggtttac accccccaaa gaggatggct aagataagat tagaagttac 1561 aaagttctta tgttccagca gacacccacc accaccacca ccaccagctc caccaccaat 1621 atcccataaa aacacattac cataatagtc tctatcaagc tgcttagaag tttttatgtt 1681 gtgtctcttt ggtgtagccg ccaaaaacct actgctcctt ctacttctaa tccccattat 1741 caccaatttc atcatttgcc cccgacggat gaatggttct tgtgatgtgt attcccgtct 1801 cttttgtgta attataatac tttccaatgt aatagcgtac tctaggactc ttttatcttt 1861 atgtacatca agaagatgtt gttgtctctg caaacaacat tgtcctttct gactctgaac 1921 acagcatcca tgagatcagc cagccaccac agcagaaaca ttgaaatctt cagcaacatc 1981 aaggaattat gttcctcttc tagtgctccg ctttataaat atcaatccaa acaaccaatc 2041 atacaaaata ctatctactt ctatattcta ttgcaacgta gtagtttgta gtttctgtaa 2101 taatttttgt cataggatat tctctccttt tttaaattta aatattgata aatatttgta 2161 tctgtactgt actgtatcgt cgtttatttt tctttttttc tgttcctttt accagcggga 2221 agcgtttatg aaatcacttt aatcttccta ccagctctta gtttttattt cacgtttttt 2281 taattttaat cttttttttt ggtttaaaaa acattgaaaa atttataaat atacatataa 2341 aataataata aaattactta aattatagca ttaaacaaat ataacaaaac atgaattaaa 2401 atacaaaaaa aaaaaacata aatagttcta ttttatttgt gttttgcaaa acagaagaaa 2461 atgaaacaca aaactgatgt ttgatggagt cgtcgagaag atgaaagata aaaaagaata 2521 tctgtaattt ttaagtttta catatacaac aaa