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LOCUS XM_059367474 2541 bp mRNA linear INV 02-SEP-2023 (LOC106085665), transcript variant X2, mRNA. ACCESSION XM_059367474 VERSION XM_059367474.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2541 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2541 /gene="LOC106085665" /note="ubiquitin-conjugating enzyme E2 Q2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085665" CDS 304..1530 /gene="LOC106085665" /codon_start=1 /product="ubiquitin-conjugating enzyme E2 Q2 isoform X1" /protein_id="XP_059223457.1" /db_xref="GeneID:106085665" /translation="MACLNTLKLEIKTLEKIFTKNHERFQILNSSVDELTCRFIGKSG KRYDIHANITETYPSSPPVWFAESEETSVTNAVQILSNTNGRDNHVINQVGILLRELC RLHNVPLPPDIDNLTIPFQLPPPTSSSSLNQQPAAQHQIEDIESDQDDIEDPIGDSEQ ESEADEDLPLEMDDGRSTNKVSGMFVVGPIESLNFFYFLQKDEMEVEHLATLERLRQS QRQDYLKGSVSGSVQATDRLMKELRDIYRSDSFKSNMYSIELVNDSIYEWNIRLKSVD PDSPLHNDLIMLKEKEGKDSILLNIIFKETYPFEPPFVRVVHPIISGGYVLVGGAICM ELLTKQGWSSAYTVEAVIMQIAATLVKGKARIQFGATKALSQGQYSLARAQQSFKSLV QIHEKNGWFTPPKEDG" polyA_site 2541 /gene="LOC106085665" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgatttgta gaatctttac tttgtggttt tgtttttgat tgaatgctac atcttaccaa 61 ataactgagc ctgtgcaaag tataatttaa aaaatggtag tttaatattt atctaaaacc 121 tcagcaaaga taaaagaagt cagaaaacat cttccccatt taccttgatt ttgccgctgt 181 ttcaacgccg atatatcgca gagacataac gagcgcgtgc gcgtttattt tttggcgtaa 241 aatcgcttca gcgatttgtg gcgtttttgt gtaagcaata tcgtcgacgt tgctcaagac 301 accatggcgt gtctcaacac attgaaattg gaaataaaaa ccttggagaa aatctttacc 361 aagaatcatg aacgctttca aattcttaac tcgagtgtgg acgagctgac ttgccgtttc 421 attggaaaaa gcggaaaacg ttatgacatt catgcaaata taacggaaac gtatccatca 481 tcacccccag tttggtttgc cgaaagtgaa gagacaagcg taacaaatgc tgttcagata 541 ctaagcaata caaatggtcg tgataaccat gttataaatc aggttggcat attattgcga 601 gagttatgcc gcctacacaa tgttccactg ccgcccgata tagacaacct cacaataccg 661 tttcagttgc caccacctac tagttcatca tctttgaatc aacagcctgc agctcagcat 721 caaatcgaag atatcgaatc agaccaagac gatatcgaag atcccatagg ggatagtgaa 781 caagaaagcg aagcagatga agatctaccc ttagaaatgg acgatggccg cagtacgaat 841 aaggtaagtg gaatgtttgt tgttggccca atagaaagtt taaatttttt ttattttcta 901 cagaaggatg aaatggaagt tgaacattta gcaacattgg aaagactgcg tcaaagtcaa 961 cgacaagact atctaaaggg ttcagtttcg ggttccgttc aagcaaccga tcgtttaatg 1021 aaagaattac gtgatatata tcgttcagat tcgtttaaga gcaatatgta ctccatagaa 1081 ttagtaaatg actccatata cgaatggaat atacgcctta agtccgttga tccagacagc 1141 ccactacaca acgatttgat tatgctcaaa gaaaaagaag gcaaagatag tattctttta 1201 aatattatat tcaaagaaac ctatcccttt gaaccaccat tcgttcgcgt tgtacatccc 1261 ataatatcag gtggttatgt cttagtggga ggggccattt gcatggaatt acttaccaaa 1321 caaggctgga gttccgcata cacagtggaa gcggttataa tgcaaattgc agcaacatta 1381 gttaagggca aagccagaat acaattcggc gcaactaagg ccttatcaca gggtcagtac 1441 agtttggcga gagcgcagca gagttttaaa tcccttgttc agatacatga gaagaatggt 1501 tggtttacac cccccaaaga ggatggctaa gataagatta gaagttacaa agttcttatg 1561 ttccagcaga cacccaccac caccaccacc accagctcca ccaccaatat cccataaaaa 1621 cacattacca taatagtctc tatcaagctg cttagaagtt tttatgttgt gtctctttgg 1681 tgtagccgcc aaaaacctac tgctccttct acttctaatc cccattatca ccaatttcat 1741 catttgcccc cgacggatga atggttcttg tgatgtgtat tcccgtctct tttgtgtaat 1801 tataatactt tccaatgtaa tagcgtactc taggactctt ttatctttat gtacatcaag 1861 aagatgttgt tgtctctgca aacaacattg tcctttctga ctctgaacac agcatccatg 1921 agatcagcca gccaccacag cagaaacatt gaaatcttca gcaacatcaa ggaattatgt 1981 tcctcttcta gtgctccgct ttataaatat caatccaaac aaccaatcat acaaaatact 2041 atctacttct atattctatt gcaacgtagt agtttgtagt ttctgtaata atttttgtca 2101 taggatattc tctccttttt taaatttaaa tattgataaa tatttgtatc tgtactgtac 2161 tgtatcgtcg tttatttttc tttttttctg ttccttttac cagcgggaag cgtttatgaa 2221 atcactttaa tcttcctacc agctcttagt ttttatttca cgttttttta attttaatct 2281 ttttttttgg tttaaaaaac attgaaaaat ttataaatat acatataaaa taataataaa 2341 attacttaaa ttatagcatt aaacaaatat aacaaaacat gaattaaaat acaaaaaaaa 2401 aaaacataaa tagttctatt ttatttgtgt tttgcaaaac agaagaaaat gaaacacaaa 2461 actgatgttt gatggagtcg tcgagaagat gaaagataaa aaagaatatc tgtaattttt 2521 aagttttaca tatacaacaa a