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LOCUS XM_059367473 2497 bp mRNA linear INV 02-SEP-2023 (LOC106085665), transcript variant X1, mRNA. ACCESSION XM_059367473 VERSION XM_059367473.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2497 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2497 /gene="LOC106085665" /note="ubiquitin-conjugating enzyme E2 Q2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106085665" CDS 260..1486 /gene="LOC106085665" /codon_start=1 /product="ubiquitin-conjugating enzyme E2 Q2 isoform X1" /protein_id="XP_059223456.1" /db_xref="GeneID:106085665" /translation="MACLNTLKLEIKTLEKIFTKNHERFQILNSSVDELTCRFIGKSG KRYDIHANITETYPSSPPVWFAESEETSVTNAVQILSNTNGRDNHVINQVGILLRELC RLHNVPLPPDIDNLTIPFQLPPPTSSSSLNQQPAAQHQIEDIESDQDDIEDPIGDSEQ ESEADEDLPLEMDDGRSTNKVSGMFVVGPIESLNFFYFLQKDEMEVEHLATLERLRQS QRQDYLKGSVSGSVQATDRLMKELRDIYRSDSFKSNMYSIELVNDSIYEWNIRLKSVD PDSPLHNDLIMLKEKEGKDSILLNIIFKETYPFEPPFVRVVHPIISGGYVLVGGAICM ELLTKQGWSSAYTVEAVIMQIAATLVKGKARIQFGATKALSQGQYSLARAQQSFKSLV QIHEKNGWFTPPKEDG" polyA_site 2497 /gene="LOC106085665" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctcacgctct ggcgaaagtg atttttactg cacagcatcg gacgtcgggt cgggtttatt 61 aaattacaaa agaataaaat aaaatcaatt ttaggtcaga aaacatcttc cccatttacc 121 ttgattttgc cgctgtttca acgccgatat atcgcagaga cataacgagc gcgtgcgcgt 181 ttattttttg gcgtaaaatc gcttcagcga tttgtggcgt ttttgtgtaa gcaatatcgt 241 cgacgttgct caagacacca tggcgtgtct caacacattg aaattggaaa taaaaacctt 301 ggagaaaatc tttaccaaga atcatgaacg ctttcaaatt cttaactcga gtgtggacga 361 gctgacttgc cgtttcattg gaaaaagcgg aaaacgttat gacattcatg caaatataac 421 ggaaacgtat ccatcatcac ccccagtttg gtttgccgaa agtgaagaga caagcgtaac 481 aaatgctgtt cagatactaa gcaatacaaa tggtcgtgat aaccatgtta taaatcaggt 541 tggcatatta ttgcgagagt tatgccgcct acacaatgtt ccactgccgc ccgatataga 601 caacctcaca ataccgtttc agttgccacc acctactagt tcatcatctt tgaatcaaca 661 gcctgcagct cagcatcaaa tcgaagatat cgaatcagac caagacgata tcgaagatcc 721 cataggggat agtgaacaag aaagcgaagc agatgaagat ctacccttag aaatggacga 781 tggccgcagt acgaataagg taagtggaat gtttgttgtt ggcccaatag aaagtttaaa 841 ttttttttat tttctacaga aggatgaaat ggaagttgaa catttagcaa cattggaaag 901 actgcgtcaa agtcaacgac aagactatct aaagggttca gtttcgggtt ccgttcaagc 961 aaccgatcgt ttaatgaaag aattacgtga tatatatcgt tcagattcgt ttaagagcaa 1021 tatgtactcc atagaattag taaatgactc catatacgaa tggaatatac gccttaagtc 1081 cgttgatcca gacagcccac tacacaacga tttgattatg ctcaaagaaa aagaaggcaa 1141 agatagtatt cttttaaata ttatattcaa agaaacctat ccctttgaac caccattcgt 1201 tcgcgttgta catcccataa tatcaggtgg ttatgtctta gtgggagggg ccatttgcat 1261 ggaattactt accaaacaag gctggagttc cgcatacaca gtggaagcgg ttataatgca 1321 aattgcagca acattagtta agggcaaagc cagaatacaa ttcggcgcaa ctaaggcctt 1381 atcacagggt cagtacagtt tggcgagagc gcagcagagt tttaaatccc ttgttcagat 1441 acatgagaag aatggttggt ttacaccccc caaagaggat ggctaagata agattagaag 1501 ttacaaagtt cttatgttcc agcagacacc caccaccacc accaccacca gctccaccac 1561 caatatccca taaaaacaca ttaccataat agtctctatc aagctgctta gaagttttta 1621 tgttgtgtct ctttggtgta gccgccaaaa acctactgct ccttctactt ctaatcccca 1681 ttatcaccaa tttcatcatt tgcccccgac ggatgaatgg ttcttgtgat gtgtattccc 1741 gtctcttttg tgtaattata atactttcca atgtaatagc gtactctagg actcttttat 1801 ctttatgtac atcaagaaga tgttgttgtc tctgcaaaca acattgtcct ttctgactct 1861 gaacacagca tccatgagat cagccagcca ccacagcaga aacattgaaa tcttcagcaa 1921 catcaaggaa ttatgttcct cttctagtgc tccgctttat aaatatcaat ccaaacaacc 1981 aatcatacaa aatactatct acttctatat tctattgcaa cgtagtagtt tgtagtttct 2041 gtaataattt ttgtcatagg atattctctc cttttttaaa tttaaatatt gataaatatt 2101 tgtatctgta ctgtactgta tcgtcgttta tttttctttt tttctgttcc ttttaccagc 2161 gggaagcgtt tatgaaatca ctttaatctt cctaccagct cttagttttt atttcacgtt 2221 tttttaattt taatcttttt ttttggttta aaaaacattg aaaaatttat aaatatacat 2281 ataaaataat aataaaatta cttaaattat agcattaaac aaatataaca aaacatgaat 2341 taaaatacaa aaaaaaaaaa cataaatagt tctattttat ttgtgttttg caaaacagaa 2401 gaaaatgaaa cacaaaactg atgtttgatg gagtcgtcga gaagatgaaa gataaaaaag 2461 aatatctgta atttttaagt tttacatata caacaaa