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LOCUS XM_059367203 5151 bp mRNA linear INV 02-SEP-2023 ABCA1-like (LOC106085142), mRNA. ACCESSION XM_059367203 VERSION XM_059367203.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; includes ab initio. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 21% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..5151 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5151 /gene="LOC106085142" /note="phospholipid-transporting ATPase ABCA1-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106085142" CDS 126..5099 /gene="LOC106085142" /codon_start=1 /product="phospholipid-transporting ATPase ABCA1-like" /protein_id="XP_059223186.1" /db_xref="GeneID:106085142" /translation="MSPIVFCVILISLRISMEIGKQPIETYPLLNLTKYWTQILELIG ERKANMSRIIEGFTHNPFIPQMIVGYAPNSKAYHNIMEGTRNLLFGVDFKSYETCDDL RVAIIKENLFAGVCFEVVTTTDDDGVIDDAYELIAGLYPNFLKYRLIFPYACRVYHDT FIGISWHTHSLYHFINRTDQRNIGVDDGGYVGYIREGFAPMQNAISLSYLQLVAAVDR PDFHIPDIYMCRYPSKEFLKDEVIESVDFSLSLLLVFGNYYPVLILVSIKWTDGVSIL EQSGFFPLLVVFCVYNTASICFILMLASFYRRTLSAVTGTAVLWFATYLPYIISLNSL RVAVWGVNIFVMTFHNTAMGYSLENILEFELFGRGFTFEHFFDTRPLDNTISTAYYLA IMLLQSCGYTCISLYMEEIMPGNFGLPKRWNFLFDFKRRSSSTFLGFHLREHSWGDAR GGSVGSGPGTSITARPSPFIYEVMGASNVVMVDIQNISKSYADMMEEEATLNNISLQL YDNEITILLGHNGAGKTTLIAIIAGLIPPSAGNITIDGFDMAKDQRYACASLGLAMGD STLYPDLTVEDQLRFFGFLKGLQALAVEDEMERYLYDSKLTEYRLVSTKALPMGVRQK LAICCALMGKSRVVLLDDPMTHMDLPGRNLMWKLLESEKAHRTIMIASSSSSIVESLG DRVAIISNGKLQCDGTPTFIKKIYGQGYRLTISKGPYCNIQSVTNRVKQFIAHITPIS TLGNEIVYALEETHTEVFEQIINDLEQNMDQLAIEAVTLSAMQIDDIFFKLGAQSPSQ DNHRRLREIMNGESSYPEESQNLKFMKITARLTGISRILQQCRALWHQRLLYAYYYRD HYVRRLMYPPVFVAVAFFVSAFGLNLLRMPHIDISLDQYASSVTLIDRRSLASGSGIS DILDRYKELIFWLGIQHKLEETEGELFAEYYIDKDVRTLERMDQTHHVGVTFAADHIV AWFNNVALHSVPLSLNLLHNAILRTIHGDQCGIEITLEPLNNMQNHLDGLLRVTINTS NVLAICISVCMCCLCNSISFIFVREVHSGFTYTQLLAGAKIWMYWLVNISYDTLVVLG MALIITFSIFLCQYHLTISTHVYAWYFFVLVLAGWCIYSLNYMTSLFFSNPVHAYAIV LSFETFGIICFCHIVEAFEKSYVNTAKSPYAAYFLFLPLFSVCSAISTIYYNGQFLRV CSDPDIRATSIYLENCKAIPNCCREFKMMGSENGILMETIALICIITLCWCIILITDY HYLLQCKNIPRDDYYAQLNDHKRRHDNLDDTQFGEESTFLEHYKVQRLTNAHFKDIPL ICDRVGKNFDQYTAVDRLSLILKSYDCFGILGVSGCGVSTLFKLITGSEEMSYGRILI KGQNISCNFSLLQQSVGHGKKVMISFPELSIKNIMEHLCLLQCYPAEHVADICLNLAK VLGLLPHYDKYLNVLSAGTLNRLNCALAVMGNPDIVILNVATSGIDSAGKRIVWNILK RMQNQGTAILLATTSLRDCERFCNRVAFMSHGRLCLIGNPWSLNKFYADYNLLKVKFT RNILHSQRNMARNYLYAASLNKLTDFVYRKFPNSMLKEHHGNHFTFVIPQKSATVSNI FITMMRNAHLLNVEDFELTRCSLSKSFIEFWEREYRPKRIDDHLSLL" ORIGIN 1 aagtctatgc ttggcaaaac tccggaccca ccaactacaa cagtgagtgg gataaatttt 61 tgctgctgat atggaagaat gtgcgtctac tctggaacaa ttggcattac tttgtcatct 121 cggtaatgtc gcccatagtg ttttgtgtaa ttttgatttc attacgcata tccatggaaa 181 ttggcaaaca acccattgag acttatcccc ttttgaatct cacgaaatat tggacacaga 241 tattggaact tatcggtgaa cgtaaagcga atatgagtcg aataattgaa ggatttaccc 301 ataatccttt catacctcaa atgattgtgg gttatgcacc gaattccaaa gcttatcaca 361 atatcatgga gggcactaga aatctattat tcggagtgga tttcaaaagc tatgagactt 421 gtgatgatct aagagtggcc atcataaagg agaatctctt tgcaggagtt tgctttgaag 481 tggttacaac gacagacgat gatggtgtta ttgatgatgc ctatgaactt attgcaggat 541 tatatccaaa tttcctgaaa tatcgcctta tatttccgta tgcctgtcgc gtgtatcatg 601 acacctttat tggcatcagt tggcacactc attctttgta tcatttcatc aatcgcaccg 661 atcaaaggaa tattggtgtt gacgatggcg gctatgtggg ctatatacgt gagggattcg 721 ccccaatgca aaatgcaata tccctttcct atttacaatt ggtagctgca gtggatagac 781 ctgattttca tatacccgac atctatatgt gccgttatcc ttccaaggag tttctcaagg 841 atgaagttat cgaaagcgtg gattttagtt tgtcattgtt gttggttttt ggtaattact 901 atccggtgct gatattggtt tcgatcaaat ggaccgatgg agtttcaata ctggaacaaa 961 gtggtttctt tccacttctc gtggtctttt gcgtctacaa tacggctagc atatgtttca 1021 tccttatgtt ggcatccttt tataggcgaa ccttaagtgc ggtaacagga actgctgtgt 1081 tatggtttgc cacctatctg ccctatatca tttcgctgaa ttccctgcgc gtggctgtat 1141 ggggggtgaa tatctttgtt atgacctttc acaataccgc catgggctat agcttggaga 1201 atatcttgga atttgaatta tttggtcgtg gctttacttt tgagcatttc tttgatactc 1261 ggcccctgga caacaccata tcgacagcct actatttggc tataatgctg ttgcagagtt 1321 gtggctacac ttgcataagc ctttatatgg aagaaataat gccgggaaat tttggcttgc 1381 ccaaaagatg gaactttctg tttgacttca agcggcgaag cagcagcaca tttttgggct 1441 ttcatctcag ggaacatagt tggggagatg ctcgcggtgg cagtgttggt agtggaccag 1501 gaacttcaat cacagcaaga ccctcacctt ttatatatga ggtaatgggc gcaagtaatg 1561 tggtaatggt cgatatacaa aatatctcaa aaagctatgc ggatatgatg gaggaagagg 1621 ctacacttaa caacatcagt ttgcagttgt acgacaatga gataaccatt ctgttgggtc 1681 acaatggagc tggcaagacc actttgattg ccatcatagc aggcctcatt cctccctcgg 1741 ctgggaacat cacaattgat ggtttcgata tggccaagga tcagcgttat gcctgtgcct 1801 ctttgggtct ggccatgggt gattccactt tgtatcccga tttaacagtc gaggaccaat 1861 tgcgcttctt tggctttctc aaaggtttac aggccctagc tgtggaggat gagatggaac 1921 gttatttgta tgattccaag ctaacagagt atcggctggt aagcaccaag gccttgccca 1981 tgggtgtgag acaaaaactg gccatctgtt gtgcccttat gggtaaaagt cgtgtggttc 2041 tattggatga tcccatgacg catatggatt tgccgggaag aaatcttatg tggaagttgt 2101 tagagagtga aaaagcacac agaaccataa tgatagccag cagcagctca agcattgtgg 2161 aaagtttagg agatcgagtg gccataatat caaatggaaa acttcaatgt gatggcacgc 2221 ccacctttat aaagaaaata tatggccaag gatacagatt gactatatcc aaaggtcctt 2281 attgcaatat acagagtgtc acaaatcgag taaaacaatt cattgcccat ataaccccca 2341 taagcacact gggcaatgag attgtctatg cgcttgagga aacccacacg gaggtctttg 2401 agcagataat caatgatttg gaacagaata tggatcaact tgccattgaa gcggtaacct 2461 taagtgccat gcaaatcgat gatatattct ttaaattggg agcacaatca ccaagtcaag 2521 acaaccacag acgtctgagg gaaatcatga atggtgaatc ctcatatccc gaggagagtc 2581 aaaacttaaa atttatgaaa atcactgcta ggcttacagg catttcacgt attcttcaac 2641 aatgtcgagc cctgtggcat caacgtttac tctatgccta ttactacaga gatcactatg 2701 tgcgacgtct gatgtatcct cctgtatttg tggcagttgc cttttttgtc tcagcctttg 2761 gccttaacct cttgaggatg ccacatattg atatatccct ggatcaatat gcttccagtg 2821 ttaccctcat cgatagacgt tctttggcca gtggcagtgg gatcagtgac attctagaca 2881 gatacaagga gttgattttc tggttgggca ttcagcataa actggaggag accgagggag 2941 aacttttcgc agaatactat atagacaagg atgtaagaac gctggagcgt atggatcaaa 3001 cccatcatgt gggagtaaca tttgctgccg atcacattgt ggcctggttc aacaatgtag 3061 ccctgcactc ggtgccttta agtttgaatt tgctgcacaa tgccatattg agaaccattc 3121 atggtgatca atgtggcatt gaaattaccc tggaacccct taataacatg caaaatcatc 3181 ttgatggcct attgcgagtc accatcaaca ccagcaatgt cttggccatt tgcatatccg 3241 tgtgcatgtg ttgtctatgt aactcaattt ccttcatttt tgtgcgtgaa gtacattcgg 3301 gtttcactta cacccaactg ctggctggag ctaaaatatg gatgtattgg ctggtgaaca 3361 tatcctatga cactttagtt gttctaggca tggctctgat aataacgttc tcaatattcc 3421 tgtgccaata tcatttgact atatcaacac atgtttatgc ttggtacttc tttgtccttg 3481 tactggccgg ttggtgtata tactccctca attatatgac atctctgttc ttctcaaatc 3541 ctgtgcatgc ctatgccatt gtgttatcct ttgaaacctt tggaattatt tgtttctgtc 3601 atatcgttga agcctttgaa aaaagttatg ttaatacagc aaaaagtcca tatgcggcat 3661 atttcctatt cttaccatta tttagtgtct gcagtgcaat ttccaccatt tactataatg 3721 gtcaattttt aagagtatgc agtgatccgg atattcgagc cacttccata tatttagaga 3781 attgtaaggc aatacctaat tgttgtcgtg aatttaaaat gatgggttct gaaaatggca 3841 ttctaatgga aacaatagcc ctcatatgta ttatcacctt gtgctggtgt attatattaa 3901 tcacggatta tcattatctg ttgcaatgca agaatatacc aagagatgat tattatgccc 3961 aattaaatga tcataaacga cgccatgata acttggatga cacccaattt ggtgaagaat 4021 ctaccttctt ggagcattat aaggtgcagc gtttgacaaa tgcccatttt aaggatatac 4081 cactcatatg tgatcgtgtg ggcaaaaatt tcgatcaata cacagctgtg gatcgtctca 4141 gtctcatttt gaagagttac gattgttttg gcatattggg cgtaagtggt tgcggtgttt 4201 ccactctctt taaattaatc accggttctg aagaaatgtc ctatggtcga attttaatca 4261 aaggtcaaaa tatttcctgc aatttttcct tacttcagca gtcagtgggt catggcaaaa 4321 aagtgatgat aagttttccc gaattgtcta tcaagaatat catggagcat ttatgcttgc 4381 tgcagtgtta tccagctgaa cacgttgctg acatctgtct gaacttagct aaagttttgg 4441 gcctgttgcc acattatgac aaatatttaa atgtcttaag tgctggcacc cttaatcgcc 4501 tcaattgtgc cctggctgta atgggtaatc cagacattgt gatactcaat gtggccactt 4561 cgggtattga ttctgccggc aagagaattg tctggaacat cttgaaacgt atgcaaaacc 4621 aaggcaccgc catactgctt gccaccacta gtctgaggga ttgtgaaaga ttctgtaatc 4681 gtgtggcatt tatgtcacat ggacgtctct gtttgattgg caatccttgg agtttgaaca 4741 aattttacgc cgactataat ttgctgaaag tgaaattcac tcgaaatatt cttcattctc 4801 agaggaatat ggcaagaaat tatctgtatg ctgcaagtct gaataagttg acggattttg 4861 tataccgcaa atttccaaat tcgatgctaa aagaacatca cggaaatcat ttcacttttg 4921 tcatacctca gaaatcggca actgtttcga atatattcat aaccatgatg cggaatgccc 4981 atttacttaa tgttgaagat tttgaactga cccgttgttc cctatctaaa tcgtttatag 5041 aattttggga aagagaatat cgtccgaaac gtattgatga tcatttatca ttgctataga 5101 gttgttgttg tttttcgcac ttttaaacaa aaataattat ctgaacttat t