PREDICTED: Stomoxys calcitrans NADH-ubiquinone oxidoreductase chain

LOCUS       XM_059367122             987 bp    mRNA    linear   INV 02-SEP-2023
            2-like (LOC131996922), mRNA.
ACCESSION   XM_059367122
VERSION     XM_059367122.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq; corrected model; includes ab initio.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio            :: 5% of CDS bases
            internal stop codons :: corrected 8 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..987
                     /gene="LOC131996922"
                     /note="NADH-ubiquinone oxidoreductase chain 2-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:131996922"
     CDS             1..987
                     /gene="LOC131996922"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 8 bases at 8
                     genomic stop codons"
                     /codon_start=1
                     /transl_except=(pos:148..150,aa:OTHER)
                     /transl_except=(pos:160..162,aa:OTHER)
                     /transl_except=(pos:397..399,aa:OTHER)
                     /transl_except=(pos:427..429,aa:OTHER)
                     /transl_except=(pos:454..456,aa:OTHER)
                     /transl_except=(pos:613..615,aa:OTHER)
                     /transl_except=(pos:646..648,aa:OTHER)
                     /transl_except=(pos:973..975,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: NADH-ubiquinone
                     oxidoreductase chain 2-like"
                     /protein_id="XP_059223105.1"
                     /db_xref="GeneID:131996922"
                     /translation="MDMKTLHYWAHTPFIKVLILFFLIFNNSSKIIFLIILIIGTLIS
                     ISANSXLGAXIGLEINLLAFIPLIRDNKLISTEASLKYFLTQALASSVFLFAVILFLL
                     NSKRINSNYLIEIIIFSSLLLKRGSAPFHFXFPNVIEGLSXVNALILITXQKIAPLML
                     ISYIIFKPLIIIRIILSSLIGALGGLNQTSLRKLIAYSSINHLGXILAAIFNRNLXLI
                     YFLFYTFLTFSIVFIFNIFKISYINQLFSLFFFDKNIKFFLFFNLLSLGGLPPFLGFL
                     PKFLVIQSLTLNNQLFILTFIVLITLITLYFYIRLCYSAFILNYNENNXVLS"
ORIGIN      
        1 atggatatga aaactttaca ctactgggct cataccccat ttataaaggt tttaatcctt
       61 ttctttttaa tttttaataa ttcgtcaaaa attatatttt taattatttt aataatagga
      121 acattaattt caatttctgc taattcttga ctaggagctt gaataggttt agaaattaat
      181 ttgttagctt ttatccccct aataagagat aataaattaa tatctactga agcatcatta
      241 aaatactttt taactcaagc tttagcatct tctgtatttt tatttgcagt aattttattt
      301 ctattaaatt caaaaagaat taattcaaat tatttaatag aaataattat tttttcctct
      361 cttttgttaa aaagaggatc agctcccttt catttttgat tccctaatgt aatagaagga
      421 ttatcatgag ttaatgcttt aattttgata acttgacaaa aaattgctcc tttaatgtta
      481 atttcttata ttatctttaa accattaatt atcattagaa ttattttatc aagtttaatt
      541 ggtgcattag gaggtttaaa ccaaacttca ttgcgtaaat taatagctta ttcttcaatt
      601 aatcatttag gttgaatatt agctgctata tttaacagaa atttatgatt aatttatttt
      661 ttattttaca cttttttgac tttttctata gtatttatat ttaatatatt taaaatttct
      721 tatattaatc aactattttc attatttttt tttgataaaa atattaaatt ttttttattt
      781 tttaatttat tatctttagg aggacttcct ccttttttag gatttttacc aaaattttta
      841 gtaattcaat ctttaacatt aaataatcaa ttatttattt taacatttat agtattaata
      901 actttaatta ctttatattt ttatatacga ttatgttata gtgcatttat attaaattat
      961 aatgaaaata attgagtttt aagttaa