PREDICTED: Stomoxys calcitrans NADH-ubiquinone oxidoreductase chain

LOCUS       XM_059367120            1662 bp    mRNA    linear   INV 02-SEP-2023
            6-like (LOC131996920), partial mRNA.
ACCESSION   XM_059367120
VERSION     XM_059367120.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq; corrected model.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 2 genomic stop codon
            ##RefSeq-Attributes-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            <1..1662
                     /gene="LOC131996920"
                     /note="NADH-ubiquinone oxidoreductase chain 6-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 ESTs, 20 Proteins"
                     /db_xref="GeneID:131996920"
     CDS             <1..522
                     /gene="LOC131996920"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 2 bases at 2
                     genomic stop codons"
                     /codon_start=1
                     /transl_except=(pos:7..9,aa:OTHER)
                     /transl_except=(pos:142..144,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: NADH-ubiquinone
                     oxidoreductase chain 6-like"
                     /protein_id="XP_059223103.1"
                     /db_xref="GeneID:131996920"
                     /translation="IQXILITIIFIFNLIFINIKHPLAIGLILLIQTTLVSLSSGLIS
                     KRFXFSYILFLVFLGGILVLFIYVTSLASNEIFSFSIKLILTSIIIFFIIIFILYLSD
                     KNILIQYFNIEVNSITNLNSFIIENSLSLNKLYNYPTNLLTILLINYLLITLIAIVKI
                     TNLFKGPLRPIFN"
     polyA_site      1662
                     /gene="LOC131996920"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atacaatgaa ttttaataac tattatattt attttcaatt taatttttat aaatattaaa
       61 catccacttg ctataggatt aattttatta attcaaacta ctttagtttc attatcttct
      121 ggattaatat ctaaaagatt ttgattttca tatattttat tcttagtatt tttaggagga
      181 atattagttt tatttattta tgtaacctct ttagcttcaa atgaaatatt ttctttttca
      241 attaaattaa tattaacttc aataataatt ttttttatta taatatttat tttatatctt
      301 tctgacaaaa atattctaat acaatatttt aatatagaag ttaactcaat tacaaattta
      361 aactccttta ttatagaaaa ttctttatcc cttaataaat tatataatta tccaactaat
      421 ttattaacaa ttttattaat aaattattta ttaattacat taattgcaat tgtaaaaatt
      481 actaatttat ttaagggacc tttacgacca atatttaatt aaactaatga ataaaccttt
      541 acgacttaaa cacccaattt taagaattgc aaataatgct ttagtagacc ttccagctcc
      601 tagaaatatc tcttcatgat gaaattttgg atctctttta ggattatgtt taattattca
      661 aatccttaca ggattatttt tagccataca ttatactgca gatattaatt tagcttttaa
      721 tagagttaat catatttgtc gagacgtaaa ttatggatga ttattacgaa ctttacatgc
      781 taatggtgca agttttttct ttatttgtat ttatttacat gtaggacgag gaatatatta
      841 tggatcttat ttatttactc caacatgatt agtaggagta gtaattctat ttttagtaat
      901 aggaacagca tttataggat atgttttacc ttgaggacaa atatcttttt ggggagctac
      961 agtaattact aatttattat cagcaattcc ttatttagga attgatttag tacaatgagt
     1021 atgaggagga tttgctgttg ataatgcaac attaactcga ttctttacat ttcactttat
     1081 tttaccattt attgtattag caataacaat aattcatctt ttatttttac atgaaactgg
     1141 atcaaataac cctattggat taaattctaa tattgataaa attccttttc atccttattt
     1201 cacatataag gatattgttg gatttattat tataacaata attttaatct tattagtttt
     1261 aattaatcct tatttattag gagatccaga taattttatt cctgctaacc ctttagttac
     1321 cccagttcat attcaaccag aatgatattt tttatttgct tatgcaatct tacgatcaat
     1381 tcctaataaa ttaggaggag taattgcttt agttttatca attgcaattt tagctattct
     1441 accattttat catttaagaa aattccgagg aattcaattt tacccaatta ataaaattat
     1501 attttgaatt atagtagtta cagtaatttt attaacatga attggagcac gacctgttga
     1561 aactccatat gtattagtag gacaaattct tactattatt tattttttat attttataat
     1621 taatccttta attactaaat gatgagataa tctattaaat ta