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LOCUS XM_059367069 4390 bp mRNA linear INV 02-SEP-2023 (LOC106085685), mRNA. ACCESSION XM_059367069 VERSION XM_059367069.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; includes ab initio. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..4390 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4390 /gene="LOC106085685" /note="uncharacterized LOC106085685; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:106085685" CDS 178..4308 /gene="LOC106085685" /codon_start=1 /product="uncharacterized protein LOC106085685" /protein_id="XP_059223052.1" /db_xref="GeneID:106085685" /translation="MVDCDIGVFVRRGGILLAPLAKYNNRKYQYILKCDQCNEICYCI DSFVLHCLDHDENLKAEKKVTRRKAAQQTKTSESEKDEDPLKLIKHNSVFDDEIMSDN DDTKITKNDFKVKINNESNDGIDMSLVKEEELITDSRSLNDDHENQDDHENQEEYDSQ KEYENYEEYKNEQYLKNDKEHESDDEEYPDMVNNGMRQKSTNHYDGDYVDELVDDEEE GLLVTKSRQRRKKSKITDDVEGEQGNKPLPHKKQILMFIHDFMRNRSHVAALLAAYEK QPLLWKFDKTEHLKKADRELHLRRIADEMEYANIPLTSTSQIEEVLRYIRNSYRLYIN HFDPNDRKGEKRKPPWYAKYLEFMRPCMEMTITRINEHYSNLSPQQIVQILGIYEKYP HLWNTDLVEYVCNNKRLEALQEMQQTIEKEMGMKVDIESLKRYVYNVHMYCTREKRLL VEKPCEQSDICKYYKHMSFLVDHCGPFFCSACGKKFGGVFVLKIHHSIQHENEANLKH LQCSVCLKVYKTHVPYVAHARKHMKDFKHECKDCGKKFIRPADLQIHTRYHTGELPYC CEICGQNFRHAQELTVHRRRHNKEYLHYCEECSQGFYSKDMLTDHMRMKHIKTREFVC DTCGKGFTTKKYLNRHKSIHLKGINHVCKLCGKGYKNKAGIYHHMRTHRRTDVLKKKY LDRECDEMLEDILQLLAMVDCDVGVFVRRGGILLAKYDNHKYQYILKCDQCNEICNSI GSFVLHCLDHDEKLKAETKVARRKAAHPTEVPIAENYEDPLKLIKHNSDHEDENVSEN DYTEITDYALEVKINHESSDELDMSLVKEEELITDSQSLNDEHENQVDHENEEEQECE EEDENDEEYNDMNDNKNAYGTRQKRTNHYDGDYEEEMIDDEEEEEELLVPKSRKGRTK SKNTDDVEDEPENKPFPHKKQMIFVQDFMRNRSHVVALLAAYEKHPQLWKLDKTARLK KADRELHLRQIAEEMENANIPMTNTSQIEEILRSLRSSYRNYINHFDPNDRKGEKRKT PWYAKYLEFMRPCMEMTITRINEQYSKLSPQQIVQILGIYKKYPHLWNTDLVEYVCNN KRLEALQDMQQILEKEMGMEVDIESLKRYVYNLHMYCSREKRLLVEKLCEQSDICKYY KHMSFLVDHCGPSSCSACGKKFKGVFVLKIHHSTHHENETNLKRLQCSVCHKVYKKQE PYVAHARKHMKDFKHECKECGRQFIRAADLQIHTRYHTGEMPYCCEICGHNVKCAQEL TTHRRRHNKEYVHYCQECSQGFYTKNLLTNHMRMKHIKKREFVCDTCGKGFTTKIYLT RHKAIHLQGINHFCKLCGKGYKNKAGIYHHMRTHRRTDVLTKKYLEREDEEMLEDI" polyA_site 4390 /gene="LOC106085685" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gccagaggta aacaaaaatc agttgtttac ttagctgtac atctacattc cctgtttcaa 61 ctttttaatt tggaaaaact acattttaaa tcaaagctta tgaccatatt taccctattt 121 ttccattaca ataaaaagct cttttctcat ctgcatgcac agtaacattt cttagtaatg 181 gtagactgtg atattggtgt tttcgtccga aggggtggca tacttttggc tcctttggcc 241 aaatataata atcgtaaata ccagtatata ttaaaatgtg accagtgtaa tgaaatatgt 301 tattgcattg attcatttgt gcttcattgt cttgatcacg atgaaaacct aaaagctgaa 361 aaaaaggtga ctcgtcgaaa agctgcacag caaactaaaa cgtccgaatc agaaaaggac 421 gaggatccct tgaaattaat aaaacacaat agcgttttcg acgatgaaat tatgtctgat 481 aacgatgata caaaaattac caaaaatgat tttaaggtta aaattaataa tgagtcgaat 541 gatggcattg atatgtcgct tgtaaaagag gaggaactta ttactgacag caggagtttg 601 aatgatgacc atgaaaatca ggatgatcat gaaaatcagg aagaatatga cagtcagaag 661 gaatatgaaa attatgaaga gtataaaaat gagcaatatc ttaaaaatga taaagaacat 721 gagagtgatg atgaagaata tccagatatg gtaaataatg gtatgagaca aaaaagcaca 781 aatcactatg atggggatta tgtagatgaa ctggtcgatg atgaggaaga ggggctgtta 841 gtaaccaagt cccgacagcg cagaaaaaag tcaaaaataa ctgacgatgt tgagggtgaa 901 caagggaata agcctttgcc tcacaaaaaa caaatactga tgtttataca tgactttatg 961 agaaatcggt cgcatgttgc agctctactg gctgcctatg aaaaacaacc gctactgtgg 1021 aaatttgata agacagagca tttaaaaaaa gcagatcgag aactacatct ccggcgaata 1081 gccgatgaaa tggaatatgc caatattccc ttgaccagca ccagtcaaat cgaagaagta 1141 ttgcgttata tacgtaattc ctacaggctc tacataaatc actttgaccc caacgacaga 1201 aagggagaaa aacgaaagcc cccatggtat gccaaatatt tggagtttat gcgaccatgc 1261 atggagatga caataaccag aatcaatgag cactattcaa atctgagtcc ccaacaaata 1321 gtacagatat tgggcattta tgaaaaatat ccacatcttt ggaataccga tctggtggaa 1381 tatgtgtgca ataataaaag gctggaagct ttgcaggaaa tgcagcaaac cattgaaaag 1441 gaaatgggta tgaaggtcga catagagagt cttaaacgtt acgtttacaa tgtacacatg 1501 tattgtactc gagaaaagag gctattggtg gagaagcctt gcgagcagtc agatatttgt 1561 aaatattaca aacacatgtc tttcctagtc gatcattgcg gtccattttt ctgttccgct 1621 tgtggcaaga aatttggagg agtttttgtg ttgaaaattc accatagcat tcagcacgaa 1681 aacgaagcta atttaaaaca cctgcagtgt tctgtgtgcc tgaaagtgta taagacgcac 1741 gtaccctacg tagctcacgc cagaaagcat atgaaagatt tcaaacatga gtgcaaagat 1801 tgtggtaaga aatttataag gccggccgat ttacaaattc acacacgtta ccataccggc 1861 gaattgccat attgttgtga gatatgcggt caaaatttta gacatgccca agagctaacg 1921 gtgcatcgaa gacgtcacaa caaagaatat ctacactact gtgaagaatg ttcacagggt 1981 ttctacagca aagatatgct aacggaccat atgcgaatga agcatatcaa aacacgagaa 2041 tttgtttgcg atacatgcgg caaaggcttc actactaaga aatatctaaa tcgacacaaa 2101 tccatccatt tgaagggcat aaatcatgtg tgtaaacttt gtggaaaagg ttataagaat 2161 aaagctggca tctaccatca catgagaacg catcgaagga cagatgtgtt gaaaaaaaaa 2221 tatctcgaca gagaatgtga tgaaatgttg gaagatatat tacaattgtt agcaatggta 2281 gactgtgatg ttggagtttt cgtccgaagg ggtggtatac ttttggccaa atatgataat 2341 cataaatatc agtatatatt gaaatgtgac cagtgcaatg aaatatgtaa ttctattggt 2401 tcatttgtgc ttcattgcct agatcacgat gaaaagctaa aagctgaaac aaaggtggct 2461 cgccgaaaag ctgcacaccc aactgaggtg cccatagcag aaaattacga ggatcccttg 2521 aaattaataa aacacaatag cgatcacgaa gatgaaaatg tatctgaaaa cgattacacc 2581 gaaattaccg attatgcact tgaggttaaa attaatcatg agtcgagtga tgaactcgat 2641 atgtcacttg taaaagagga ggaacttatc acagacagcc agagtttgaa tgatgagcat 2701 gaaaatcagg ttgatcatga aaatgaggaa gaacaggagt gtgaggaaga agacgaaaat 2761 gatgaagaat ataacgatat gaatgataat aagaatgcat atggtacaag acaaaaaagg 2821 accaatcact acgatgggga ttatgaagaa gaaatgattg acgatgaaga agaggaagaa 2881 gagctgttag tacccaagtc ccgcaaaggc agaacaaaat caaaaaatac tgacgatgtt 2941 gaggatgaac cagagaataa gccttttcct cataaaaagc aaatgatatt tgtacaagac 3001 tttatgagaa accggtcaca tgttgtagct ctactagctg cctatgaaaa acatccgcaa 3061 ctgtggaaac ttgataagac ggcgcgttta aaaaaagcag atcgagaact gcatctacgg 3121 caaatagctg aagaaatgga aaatgccaat attcccatga ccaacactag tcaaatcgaa 3181 gaaatattgc gttctttgcg cagttcgtac agaaattata taaatcactt tgaccccaac 3241 gacagaaagg gagaaaaacg aaagacccca tggtatgcta aatatttaga gtttatgcga 3301 ccatgcatgg agatgacaat aaccagaatc aatgagcagt attcaaaact gagtccccaa 3361 caaatagtac aaatattggg catttataag aaatatccac atctttggaa taccgatctg 3421 gtggaatatg tgtgcaataa taaaaggctg gaagctttgc aggacatgca gcaaatctta 3481 gaaaaggaaa tgggcatgga ggtcgacata gagagtctta aacgctacgt ttataattta 3541 cacatgtatt gttctcgcga aaagaggcta ctggtggaga agctatgcga gcagtctgat 3601 atttgtaaat attacaaaca catgtcattc ctagtcgacc attgcggtcc atcttcttgt 3661 tccgcttgcg gcaaaaaatt taaaggtgtt tttgtattaa aaatacacca cagcactcac 3721 cacgaaaacg aaacgaattt gaaacgcctg cagtgttctg tgtgtcataa ggtgtataag 3781 aagcaagaac cctacgtagc tcacgccaga aagcatatga aagacttcaa gcatgagtgc 3841 aaggaatgtg gtaggcaatt tataagagcg gctgatttac aaattcacac acgttaccat 3901 accggcgaaa tgccatattg ttgtgagatt tgcggccaca atgttaaatg tgcccaagag 3961 cttactacgc ataggagacg tcacaacaaa gaatatgtcc actattgtca agaatgttca 4021 cagggcttct ataccaagaa tttgctaacg aaccatatgc gaatgaagca tatcaaaaaa 4081 cgagaatttg tttgcgatac atgtggcaaa ggcttcacca cgaagattta tctaactcga 4141 cacaaagcca ttcatttgca gggcataaat catttttgta aactctgtgg taaaggttat 4201 aagaataaag ctggcatcta ccatcacatg agaacgcatc gtaggacaga tgtgttgaca 4261 aaaaaatatc tggagagaga agatgaggaa atgttggaag atatataaaa caagcacacc 4321 aatgtatgtt ttcttgggtc aagggaatta atgaaatttt gttgttgaat aaatttcgta 4381 ttataacttt