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LOCUS XM_059367059 5838 bp mRNA linear INV 02-SEP-2023 (LOC106085384), mRNA. ACCESSION XM_059367059 VERSION XM_059367059.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; includes ab initio. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 20% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..5838 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5838 /gene="LOC106085384" /note="uncharacterized LOC106085384; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins" /db_xref="GeneID:106085384" CDS 120..5687 /gene="LOC106085384" /codon_start=1 /product="uncharacterized protein LOC106085384" /protein_id="XP_059223042.1" /db_xref="GeneID:106085384" /translation="MFLNNITTNCRTCLRRDGEMLQLSDYAEGDEDHTISEMLDGIVP QIQIKVESQFSQLICQACLAKLLTGYKFQQLCIDSNQKLHAWLPEVVTSKEEQQDGDL HLENILDPLTGGDCFKMKEESEEHEKFECEINPEEVELNIKSDGEWEGASLDGERDYA ERVASDSDSSNEMLSVLKERKLKKSSKMQASDKSPRKSRHNSACTVFPCPECGKVFDR LYRLKRHSTVHSKKRAFPCEICKYSFAAEKTYLAHMQIHEIDGTDGTNNREFQCSDCP KSFEKKAALVQHSQIHNKKKPKSKIRKLSKDKEDDLEKKETKCEGENEFIKDQIEDCP QVQPNEEKENAHQIISDDIVKHEFEITPNIFEEPLDVYDDDNGEWYDDDYEDSENEDE SLGKDRTHKTRNVQNTDFVDTGIGEIEKPNTRNRRNGTFPCEVCKKIFDRPYRLKRHT SVHSLERPYVCEVCKYRFATPNLLKIHMIQHENEAGSNFSSRPRPDGFKCPDCPRRFE KQASLSAHRQIHTRNASETNYPCTVCQRNFMSIRSLTEHITNKHPEAEKHKCNQCDKT FVLHAHLVEHLNRHKGNKNFVCLICEKEFGYTNTLKEHMRTHSGESPYLCPQCGKTFR SASNLRQHMERHFGLKKYQCPECPSRFNCRSDLCKHTSTHTKAKPHVCDVCGSRFTRS YSLQKHKLLHSGERPYKCDQCSMTFVIVYHLRRHMRTHTGEKPYKCKFCDRAYAESGD LTKHLRTHVGENTYMCTECPMAFKYQTELREHLSEHYKMSQQLKKNDETQQAEEPQQQ QLLQQHELLDPQTQQHELLETQEHMLQHQQPHIQEVHENDSPTLSHVAIINSNQPPVI LDIPISNINNPPPPNTSLNLVDGCYESNRIVDMLDVVVPQIRIKEAGNSFSHLMCQMC VDKLITGYKFQRLCIETDNHLRCQLGVAPLAAYMKSDALIDTINTCELRPATDSGNNV KKAERVTEISNTNTKFECSDCGKVFDCMSRLKGHSTLHRNKKEKEKALKDQQNKEQDE ANGEKDINTVENIVVAPQIYEKSSEYVLNTEALMANKINTTEESNEKNKTDEDVSSPS KIKKRKRKEETWKKNVLKTARNSGKSYVSHTPEKKVRSERKVKPPCLDSCKLKCTTKL NENERNTIFSNFWKLANLEKQRQYIANNTEPITPKYRYVRGDGSRKPRIMNNAFYFRL GEKKIRVCKLFFKNTLDINDRNITTVLLKKHKVADTILEEDKRGKHGCSEKKYFCKIK YRNMSLRTISKCRTCLEAVGKYQLSEYIEEENNILEMLNEVVPQIHIKEENQFSAYIC QTCLEKLLTGYKFQRLCIETHKQLEKMQCDLSPNQSQIPDPLMEEEQSLDIKDELIAN ESSNDCEVNTCNVEVIYKSDADSEVASGGDTDSSNEKLSVLKERKLGKCLKTKKVTSK QNSKDIYPCQICGKQYHCFSRLKVHIALHEAKKIGIAQEKGSKKPQKTSENQEDQQVI PKILENPAEDNNKSLDIGEQKMLSPETLKVADNNEPLDKDEDQNKMPNNNDSKYTCDN CDMVFDRPFRLKRHQRQHSSDKHPYGCTLCRRDFFSAKPLIKHIRKEHPEAEKFNCDQ CEETFILHNHLIKHLKKRHKSGRILFCDICDKDFKYKSSLEKHMRSHNGERPYLCAQC GKTFRSSSNLSEHVTRHSGLPTFACPECPRRFKCGSDLRKHTATHTNLKPHVCDICGF RFTRAYSLLEHKRLHTGERPFKCDQCDKRFAIVYHLKRHMRTHTGEKPYRCKYCERAY AVGGDLTKHLRIHLGEKTYLCTECPMAFKYNSELRKHLIEHYKMSQNELNNGKGKGHE LKEDNKEKQQDEI" polyA_site 5838 /gene="LOC106085384" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tacccactaa agagaaatag aaaaattaaa ttaaaaatta aaaaaaatat atgcaaaata 61 gacaaaaaat gacgtcttca agaaattaat cgttttcccc gaaagccgct ctcagcataa 121 tgtttctaaa taatataact actaattgtc ggacttgctt gagaagggat ggtgaaatgt 181 tacaactatc agactatgct gagggtgatg aggatcatac tatttccgaa atgttggatg 241 gaattgtgcc acaaattcaa ataaaagtgg aaagccaatt ttcccaacta atttgccagg 301 cttgtttagc taagttgctt acaggttata aatttcaaca attatgcatt gatagcaatc 361 aaaagctaca tgcatggcta cctgaagtag tcacttccaa ggaggagcaa caagatgggg 421 atttgcattt ggaaaatatt ttggatcctt tgactggagg ggattgtttt aagatgaaag 481 aagagtcgga agaacatgaa aaatttgagt gtgaaataaa tccagaagag gtggaattaa 541 atataaagtc ggacggcgaa tgggaaggcg ctagtctaga tggcgaaagg gattacgcag 601 aaagagtagc tagtgattca gattcaagca acgagatgct atctgttttg aaagaaagaa 661 agctcaagaa gtcttcaaag atgcaggcat ctgacaaatc gccaagaaag tctagacata 721 actccgcctg tactgtgttt ccttgcccag agtgtggcaa agtgtttgat cgtttgtatc 781 gcctaaaaag acatagcaca gtgcactcga agaaaagagc ttttccttgt gagatttgta 841 aatatagttt tgctgctgag aaaacctatc tcgcccacat gcaaatacat gaaatagatg 901 gaactgatgg cactaacaac cgcgaattcc aatgttcaga ctgcccaaag agctttgaga 961 aaaaagccgc actcgtacaa cacagtcaga tacacaataa gaagaagcct aaatccaaaa 1021 ttcgaaaatt gagcaaagat aaagaggatg atttggaaaa gaaagagact aagtgtgagg 1081 gagagaacga attcataaaa gaccagattg aagattgccc tcaggtgcaa cctaatgagg 1141 aaaaggagaa tgcccatcaa attataagcg atgatatagt aaaacacgaa tttgaaataa 1201 caccaaacat ctttgaagaa cctttggatg tatatgacga tgataatggt gaatggtacg 1261 atgatgacta cgaagattca gagaatgagg atgagagctt gggaaaagac cgaacacata 1321 aaaccaggaa tgtgcagaat acagattttg ttgatacggg aataggagaa attgaaaaac 1381 ctaatacccg taaccgcagg aatggaactt ttccctgtga agtttgtaaa aagatatttg 1441 accggcctta tcgtttaaag cgtcacacat cggtacactc cctcgaaaga ccttatgttt 1501 gtgaagtttg caaatatcgt tttgctacac ctaatctctt aaagatccac atgattcaac 1561 atgaaaatga agcaggcagt aatttttctt ctcgaccccg acccgatggt ttcaaatgcc 1621 ccgattgtcc aaggcgtttt gaaaaacagg catcactctc agcccatcgt caaatacata 1681 cgcggaacgc ttcggaaaca aactacccct gcactgtatg tcaacgtaat tttatgtcca 1741 ttaggtcact tacggagcat ataaccaata aacatcccga agcggagaaa cataagtgta 1801 atcaatgtga taagactttt gttttacacg cccatctggt ggaacatttg aaccgacaca 1861 agggcaataa aaactttgtc tgccttatat gtgaaaaaga atttggttat actaatacac 1921 tgaaggaaca tatgcgaaca catagcggag aaagtccata cctatgccct cagtgtggaa 1981 aaacatttag aagtgcaagt aatttaagac aacatatgga aagacacttt ggtcttaaga 2041 aataccagtg cccagaatgc cccagccgct ttaattgtcg ttcagaccta tgcaaacata 2101 catcaacgca cacaaaagcc aagccacatg tatgcgatgt atgtggatcg cgctttaccc 2161 gatcgtattc actgcaaaaa cacaaactct tgcattctgg tgaacgacct tacaaatgtg 2221 accagtgtag tatgactttt gttatcgtat atcatttgag gcgtcacatg agaacgcaca 2281 caggagaaaa accttataaa tgcaaattct gtgatcgggc atatgcggaa agtggagatt 2341 tgaccaagca tttacgaacc catgttggag aaaatactta catgtgtact gaatgcccca 2401 tggcatttaa atatcaaacg gagttgcgtg aacatctctc agaacattat aaaatgtcac 2461 agcaactgaa aaaaaacgat gagacacaac aagcagaaga accccaacaa caacaactac 2521 tacaacaaca tgaactattg gatccccaaa cacaacagca tgaactacta gaaacccaag 2581 aacatatgct tcaacatcaa caacctcata ttcaagaagt acatgaaaat gattctccaa 2641 cactcagcca tgtggccata ataaattcaa atcaaccacc agtaatactt gacataccca 2701 tttcaaatat aaacaatcca ccaccaccaa acacttcact gaatctagta gatggttgtt 2761 atgagagcaa tcgaattgtg gacatgctgg atgtggttgt gcctcaaatt cgcattaaag 2821 aggctggaaa ttcattttca catttaatgt gccagatgtg tgttgataaa ttaatcacag 2881 gctataaatt tcaaagattg tgcatagaaa cggataatca tttgcgttgt cagttaggtg 2941 tggccccact tgcagcttac atgaagtcgg atgctttgat cgataccatc aatacgtgtg 3001 aactgcgtcc tgcaacagat agtggcaata atgtaaagaa ggcagagcgt gtaacagaaa 3061 ttagcaatac caatacaaag tttgaatgca gcgattgtgg aaaagtgttt gattgcatgt 3121 cacgattaaa aggacacagt acacttcatc gcaacaagaa agaaaaagaa aaagctctca 3181 aagatcaaca aaataaggaa caagacgaag cgaacgggga aaaagatata aatacggtgg 3241 aaaatatcgt ggtagctcct caaatatatg aaaaatcaag cgagtatgtt ttaaataccg 3301 aagcgttgat ggcgaacaaa attaatacca cagaagaaag caatgaaaag aataaaacgg 3361 acgaagacgt gtcaagcccc agtaaaatta agaaacgtaa aagaaaagag gaaacttgga 3421 agaagaatgt gctaaaaact gctcggaatt caggaaaatc atacgtatca catacaccag 3481 agaaaaaagt acgaagtgaa aggaaagtaa aaccaccatg cttggacagt tgtaaactta 3541 agtgcaccac aaaattaaac gaaaatgaaa ggaacacaat tttttcaaat ttctggaaat 3601 tggctaattt ggaaaaacaa cggcagtaca tagccaacaa caccgaaccc attacaccca 3661 aatatcgcta tgtgcgtgga gatggaagtc gaaaacccag aattatgaac aatgccttct 3721 attttcgttt gggtgaaaag aaaataagag tctgtaaact cttttttaaa aataccttag 3781 acataaacga tcgcaacata acaactgtgc tattaaaaaa gcacaaagtg gcagatacta 3841 tattggaaga ggacaaaaga ggcaaacatg gatgttctga aaagaaatac ttttgcaaaa 3901 taaaatatcg aaatatgtct ttgagaacta taagcaaatg tcgaacgtgt ttggaagcgg 3961 taggcaagta tcagctatcg gaatacatcg aagaggagaa caacatttta gaaatgttaa 4021 atgaagttgt acctcaaatt cacataaaag aggagaatca gttttctgcc tacatatgtc 4081 agacatgtct ggaaaaatta ttaacaggct acaaatttca aaggctttgt attgagactc 4141 ataaacaact agaaaaaatg caatgcgatt taagtccaaa tcaatcacaa attcctgatc 4201 ctctgatgga ggaggaacaa tccctagata ttaaggacga actaatagca aatgaaagct 4261 ccaatgattg tgaagtgaat acctgcaatg tggaagtgat atataagtcg gatgctgatt 4321 cagaagtagc cagtggtggt gatacagatt ccagcaatga aaagctaagc gttttaaagg 4381 aaagaaaatt gggaaaatgt ttgaaaacca aaaaagtgac cagtaaacaa aactcaaaag 4441 acatttaccc atgtcaaata tgtggcaaac aatatcattg ctttagtcgt ctaaaggtcc 4501 acatcgcttt acatgaagct aaaaaaattg gcattgctca agaaaaaggt agcaaaaagc 4561 ctcaaaaaac ttcagagaat caagaggatc aacaagttat accaaagatt ttagagaacc 4621 cagcagagga taataataaa agcttggata taggagaaca aaaaatgttg tcgcctgaaa 4681 ctttaaaggt ggctgataac aacgagccat tagataaaga tgaagaccaa aataaaatgc 4741 caaataacaa tgacagtaaa tatacctgtg ataactgtga catggtcttt gatcgtccat 4801 ttaggctaaa acgtcaccaa cgccagcatt caagcgacaa acatccatac ggatgtacac 4861 tttgtagacg agactttttt tctgccaaac cccttatcaa gcatataaga aaggaacatc 4921 cagaggcaga aaaattcaac tgcgaccagt gtgaagaaac atttattctg cacaatcatc 4981 taataaagca cctgaagaaa cgtcacaaga gtggccgaat tctattctgt gatatatgcg 5041 ataaagattt caaatataaa agttctctcg aaaaacacat gcgtagccat aacggagaaa 5101 gaccctattt atgcgcccaa tgtggcaaaa catttagaag ctcaagtaat ctaagcgaac 5161 atgtgactag gcattcaggg ctacctacgt ttgcatgccc cgaatgcccc agacgtttta 5221 agtgcggatc agacctcaga aagcatactg caacacacac caatttgaag ccacatgttt 5281 gtgatatctg cggctttcgt tttacaagag cctattcttt gttggaacac aaacgtttgc 5341 atactgggga gaggcctttt aaatgtgatc agtgcgacaa acgattcgct attgtttatc 5401 accttaaacg gcacatgcga acgcatacag gagagaaacc atacagatgt aagtattgcg 5461 agcgagctta tgctgtggga ggggatctaa ccaaacattt gagaattcat ttgggcgaga 5521 aaacatatct gtgcaccgaa tgtcccatgg cgtttaaata taattcggaa ttacgcaaac 5581 atcttataga acactataaa atgagccaaa atgagctcaa taatggcaaa ggaaaaggac 5641 atgaactgaa ggaagataat aaggaaaaac aacaagatga aatataatcg atacaaatcg 5701 ataagaattt ctggaggctt ataactgaaa atgaatcata actaacggaa gacataagta 5761 aataaatgta aaatattatt aaaataatat ttaatttata aattttaata acaagtaaaa 5821 gcagtgttac gttcggca