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LOCUS XM_059367041 5548 bp mRNA linear INV 02-SEP-2023 (LOC131996869), transcript variant X2, mRNA. ACCESSION XM_059367041 VERSION XM_059367041.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5548 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5548 /gene="LOC131996869" /note="interference hedgehog-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:131996869" CDS 179..3238 /gene="LOC131996869" /codon_start=1 /product="interference hedgehog-like isoform X2" /protein_id="XP_059223024.1" /db_xref="GeneID:131996869" /translation="MLPTTGTATTTAAPAPAPPTASTTTTLFHKNTCSSLLPPFVRTS LCSSSGGFFAFSPLSVIVKSVIFFLAFATSACLASQPPTLGVHFVRSPESAVAPKGDE VVFECEMNLGPERLEWKFRHSSNRTADGSRFIYLSKESGYNITNDEKNSKLRFVVQPE TLGDYQCVAWYGSAAIASLSARLTLVSISIDNSNGYSRNAIRWNVAPKNHILLRYGTV SSNPAAIWSFYRNGEKIPQSEVIPANGALVLNTVTAKDSGNYTCSAMNPITSQEVKLP QRIDLRVDYSDRTPPYFLTQPPTQVTARPGETVVLECPGVGSPPPVAVWSSPNIINMN NNNRTRLLPYGLQIVDVVPEDQAQYVCRLDNGIAPALVHGIKLNVLEKPSILRGPALT LTNESDTLELECSAAGNPYPDIYWLINDVDTTMDPEMQHDGRRLVIRHVQKRHAGIVQ CFAKNEVGEVSDANLLKINPRQIHGSSASAATPRPRYEDVGGGTKKGSRKKHKPTMVP PSRPNVTRLSDDSVMLRWYVPKNDGLPIQFFKVQYRMLGDASRKIPRENWQTTNDDIA YGKRNTDISKNYTTSVTGLKPDRFYRFRIVAVYNNDDNKEGNTSSKFFLQRGDALDLS KSNLPIPELARIEALSESAVMLQWSLPTAAATSHIDGFYAYYRPAASAGEYQKATVDG MHTRKFKIDMLEAGTAYEFKLQSFNDMAASEFSAIVQGKTKKSVTTPAPTLPAVVPAT KANQEDNSIFPVVAGAAGGGILLLIATIAACLCMKKRKNSQNEDENKPQLDHIQADFV TPQVQVLGVNNHHKGNHRLNGVLPRMNITPNPLAQEADKAHLASQGIHHAQPYYQTPP TPTMMNKRDYQQPPPVPPHQNNNHAPMMNHHLPPTGHHAPLTPSMEQQRRTLDRGVRN MNYNQSNGNAMSPPPHDAALNMDGMATRIPSLRRTRRTSGGSTNNALNALSNNPNGGL GIPIAVSGSPRVQRSPMPARAAMMKQRSRLGSHNDNISSGSLNSIEV" ORIGIN 1 gatgtacatc ctgttaatga actttaccag ttgtaaatgt taattaaagc atcttgaaaa 61 taatttctac taaagtttta aagttcaatg taattggaat ttaaagcagc gtagaagaaa 121 gaagtcaaca taaaattttt gcaaatttta tgcgccaaca acaaaagtga caagcacaat 181 gttgccgaca acaggaacag caacaaccac agcagcacca gcaccagcac cgccaactgc 241 ttctacgacg acaacattat ttcataaaaa cacctgctca tcattgctgc cgccttttgt 301 tcgaacctca ttatgctcat cttccggcgg cttttttgcc ttctcgccac tatctgtcat 361 cgttaaatct gtgattttct ttttggcctt tgcaacaagt gcctgccttg cctctcaacc 421 ccccacatta ggggtccact ttgtgcgatc tcctgagtca gcggtggcac ccaagggaga 481 tgaggtggtc tttgagtgtg aaatgaattt aggtcccgaa cgtttagagt ggaaatttcg 541 tcactccagc aatcgaacgg cagatggaag tcgatttatt tatctatcca aggagagtgg 601 ctacaacata accaacgatg aaaagaattc caaattacgg ttcgtcgtgc aacccgagac 661 cttgggcgac tatcaatgtg tagcctggta tggctctgcg gccattgcat ctctgtcagc 721 tcgtttgact ttggtctcta tatcgataga caattcaaat ggctactccc gtaatgccat 781 acgctggaat gtggccccga aaaatcacat attactgaga tatggaacgg tctcatccaa 841 tcctgctgcc atatggagtt tttatcgcaa tggtgaaaaa ataccacaat cagaagtaat 901 accagcaaac ggtgccttag ttctgaacac tgtgacagct aaagattcag gcaactatac 961 ctgttcggcc atgaatccca taacaagtca agaggttaaa ttgccacaac gcattgattt 1021 gagggtggac tatagtgatc gcaccccacc ctattttttg actcagccac caacgcaggt 1081 gacagctaga ccgggagaaa cggtggtctt ggaatgccct ggtgtaggtt cacccccacc 1141 cgtagctgtc tggagttcac ccaatattat caatatgaat aataataata ggacgcggtt 1201 attgccttat ggcctacaaa ttgtcgatgt ggtgcctgag gatcaggcac aatatgtttg 1261 ccgtttggat aatggcatag ccccggcctt ggtacatggc attaaattga atgttttgga 1321 aaaaccttct atactaaggg gtccagctct tactttgacc aatgaaagtg atacactgga 1381 actggaatgc tcagctgctg gaaatcctta tccagacatt tattggctga taaatgatgt 1441 ggataccacc atggatccgg aaatgcaaca tgatgggcgg cgtttggtta tacgacatgt 1501 gcagaaacgt catgcgggta tagtgcagtg ctttgccaaa aatgaagtgg gagaggttag 1561 cgatgccaat cttttgaaaa taaatcccag acaaatccat ggttcttcag cttcggctgc 1621 tacccctaga cccagatacg aagatgtggg tggtggcact aagaaaggtt cccgcaagaa 1681 gcataagcct accatggtgc caccttcacg tcccaatgtc actcgtttat ccgatgattc 1741 ggttatgctg cgttggtatg tgcccaaaaa tgatggtcta cccatacaat tctttaaagt 1801 acaatatcgc atgctgggcg atgcttcgcg caaaattccc cgagaaaatt ggcaaaccac 1861 caatgatgac atagcctatg gcaaacgtaa taccgatatt agcaagaatt atacaacatc 1921 agtgaccggc ttgaagccag atagatttta tcgttttcga attgtggctg tctataataa 1981 tgatgacaac aaggaaggca atacatcatc gaaattcttc ttgcaacgtg gtgatgcttt 2041 ggatttatct aaatcgaatt tacctatacc agaactggca cgcattgagg ctttatccga 2101 gtcggcagta atgctgcaat ggtcattgcc tactgccgcg gccacatcac atatagatgg 2161 tttctatgct tactataggc cggcagcatc ggctggagag tatcaaaagg ctacagtaga 2221 tggtatgcat accaggaaat tcaaaattga tatgttggaa gctggtacag cctatgaatt 2281 taaactgcaa tcatttaatg acatggctgc ctcggagttt agtgctatag tacaggggaa 2341 gacaaaaaaa tcagtcacca ccccagctcc tacgctgccc gctgtggtac cagccaccaa 2401 agccaatcaa gaggacaatt caatatttcc cgtagttgca ggagcagctg gaggtggcat 2461 actgttatta atagccacca tagcagcttg tctgtgtatg aaaaagagaa agaattctca 2521 aaatgaagat gaaaataaac cccagctgga tcatattcaa gctgattttg ttacacctca 2581 agtacaagtt ttgggtgtca acaatcatca taagggcaat catcgtttaa atggagtatt 2641 accacgcatg aatataaccc caaatccttt ggcccaagag gccgataagg ctcacttagc 2701 atcccaaggc atacatcatg cgcagcccta ttatcagact cctccaacac ctaccatgat 2761 gaataagcgg gactatcagc agccaccgcc agtgccacct catcaaaaca acaatcatgc 2821 gcccatgatg aatcatcatt tgccgcccac gggtcatcat gctcccttga cacctagcat 2881 ggaacagcaa aggcgcaccc tggatcgagg ggtgcgcaat atgaattaca atcaaagtaa 2941 tggcaatgcc atgtcaccgc ctccacatga tgctgccttg aatatggatg gcatggccac 3001 cagaatacct tcactaagaa gaacacgtcg tacttcggga ggtagtacca acaatgcact 3061 gaatgcctta tcgaataatc ccaatggtgg cttgggtata cccattgctg tcagtggcag 3121 ccctcgagta caaagatcac ctatgcccgc ccgagcagca atgatgaaac agcgttcgcg 3181 cttgggcagt cacaatgaca atatatcttc gggcagttta aacagtattg aagtgtagtc 3241 ttctaacata aagtaaagga gtcttcaaca aaaattgtct acgagtatga gttttagaga 3301 agtgtaagtt ataagaacaa tagataattt ttaatttaat aagacaatta gttataagct 3361 atagaaatct ttatttaagt taattttata aggtaagcct aattgtgtaa aatcctaaaa 3421 aaatatgctg ttatgtctta ggtatcacag attaaatata agttgtatat acatattcct 3481 attaatgtga ggtgatataa gaatttgtag tttacagcga agaaagtccg gcgcataact 3541 tttcaaccat ttctcaaaat tttcaaaaaa tgcgagtttt tcatttccat tttgaattaa 3601 aattgtatac atttttaatt ctgtacgcta tttctctcaa gggggagaaa gtcgactttt 3661 gttggcaaat gtgtatagat cttatatcgc ctctacacac atcatcgaga cttttatatt 3721 ttgaagatca tattaatttt gaatattaaa caactcgaat cctatttgta aaagacttaa 3781 atcccattag ttaagtatat gtctgaatag agcatgacag tatgaaaagc tcaaaagata 3841 gtcaatctta tatgactatc ttttgatagc gaaactaaaa ttcgaatatt ttattacata 3901 catatatatt tcattttatt gcataatagt gcttaaacgt atgttgatat cttaaattca 3961 taacatggca atatttttaa gataccagta taatgggtca cattatattt gcacacaaaa 4021 catcgatcct tttgatggca agatggtgat ttcaccatat ggtttttatg ttgttgtgtg 4081 agacaacctt taaataattc agccatgggt gttgtcctat cttaccatat tcggttcgaa 4141 catcatgaat cctgctgtag ctcattattc aaaataacag cgatataggc tttagaccct 4201 caatcggaag atccgtcttt aaggcaggta tatctaagta tggtccgata taaaccacac 4261 ccaagtccta cttatcacag actgcacttt tgtacttttg tccattattg ttaaataaca 4321 accttttaga ataattttac ttattttatg ccaaataagt cgtttaaatt aagcgacgtc 4381 tgcccacaat ttaggcagct aagttatgcc gcacgcaaat tgttaaccta aacgcaaatg 4441 aatttacaat tactgacaag ggactttgct caatgaaacg tcaaaatttg ctgtgctgcc 4501 aaaaatctta ctggcccttg ggctactcaa aaattattca ccacacttga cgtcatattt 4561 tgactatccc cacaactttg ctaccattcg acacatagtc ttaacaataa tgcctcatga 4621 aatttatgtt gcagtattaa caaatgaaat ttgcaacact ctcaactggt gtgaatggtt 4681 gagatgtttt ccataactac aatacattag caaaatttgt cagtgtaaac atagcattag 4741 ttcaaaatgt taggataatg aagttataca tatatatttg cctccacaat gggaatttaa 4801 gacatcaaca tatcgtattt tcaaaagcaa aatattgagg cttaacattt tattttctaa 4861 tgccgaaagc acattataaa aaatgagcac agaaacgaaa taataaagaa attttaaaaa 4921 aaattagttt tcttatcgaa tgtatataaa taaaaattta taactaattt tgtatagact 4981 ctttaaagtt agttaagtta atttataatt taaaaaaagt aatcaaaaca caaattattt 5041 ttttaagaat ccatgtatga aaccaataac acaaatctat tgatcattgc cgtcctgtac 5101 atgttttagt tgcacaaaca catatatttg tcattgagtt taataatatt taattatttt 5161 tttttaataa tcgggtgtgt tctagtaact acttaaattt ttcccgaaaa aaaacaaatt 5221 gtaattatta cataaacaaa aacaaatctt aatttcttat gatgaaaaac ttttcccagc 5281 tgtatacatt tgtggtgtag taatttttaa cttaaactcc gtttacactg ctcattaaat 5341 ccggattaaa ggctctcgtc agctgatttt attaagggaa agcagtgtaa cggggtttta 5401 atatgcttta aaaatgtttt tcatcccgta acttattcct ttagtatttt ttcttttttt 5461 gtgaatactt ggttataaag ccaaaaaata ttatttgtga gcttgcatac gaaaatattt 5521 ttttaaaaat aaatttaata aaaaatgt