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LOCUS XM_059367040 5944 bp mRNA linear INV 02-SEP-2023 (LOC131996869), transcript variant X1, mRNA. ACCESSION XM_059367040 VERSION XM_059367040.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5944 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5944 /gene="LOC131996869" /note="interference hedgehog-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:131996869" CDS 179..3634 /gene="LOC131996869" /codon_start=1 /product="interference hedgehog-like isoform X1" /protein_id="XP_059223023.1" /db_xref="GeneID:131996869" /translation="MLPTTGTATTTAAPAPAPPTASTTTTLFHKNTCSSLLPPFVRTS LCSSSGGFFAFSPLSVIVKSVIFFLAFATSACLASQPPTLGVHFVRSPESAVAPKGDE VVFECEMNLGPERLEWKFRHSSNRTADGSRFIYLSKESGYNITNDEKNSKLRFVVQPE TLGDYQCVAWYGSAAIASLSARLTLVSISIDNSNGYSRNAIRWNVAPKNHILLRYGTV SSNPAAIWSFYRNGEKIPQSEVIPANGALVLNTVTAKDSGNYTCSAMNPITSQEVKLP QRIDLRVDYSDRTPPYFLTQPPTQVTARPGETVVLECPGVGSPPPVAVWSSPNIINMN NNNRTRLLPYGLQIVDVVPEDQAQYVCRLDNGIAPALVHGIKLNVLEKPSILRGPALT LTNESDTLELECSAAGNPYPDIYWLINDVDTTMDPEMQHDGRRLVIRHVQKRHAGIVQ CFAKNEVGEVSDANLLKINPRQIHGSSASAATPRPRYEDVGGGTKKGSRKKHKPTMVP PSRPNVTRLSDDSVMLRWYVPKNDGLPIQFFKVQYRMLGDASRKIPRENWQTTNDDIA YGKRNTDISKNYTTSVTGLKPDRFYRFRIVAVYNNDDNKEGNTSSKFFLQRGDALDLS KSNLPIPELARIEALSESAVMLQWSLPTAAATSHIDGFYAYYRPAASAGEYQKATVDG MHTRKFKIDMLEAGTAYEFKLQSFNDMAASEFSAIVQGKTKKSVTTPAPTLPAVVPAT KANQEDNSIFPVVAGAAGGGILLLIATIAACLCMKKRKNSQNEDENKPQLDHIQADFV TPQVQVLGVNNHHKGNHRLNGVLPRMNITPNPLAQEADKNRNVMELRFMSNTNSASSP ANSNSNTNSNNSCHNSQEKLNSYNAEEAPHTPPQRSTSSCETLEAVDGINSPLTPNGL DAESPLSKPLPPLPSKNTNKLANHTTPSSLKNNTASLSKSNHQSKSSTNNLNNSQAHL ASQGIHHAQPYYQTPPTPTMMNKRDYQQPPPVPPHQNNNHAPMMNHHLPPTGHHAPLT PSMEQQRRTLDRGVRNMNYNQSNGNAMSPPPHDAALNMDGMATRIPSLRRTRRTSGGS TNNALNALSNNPNGGLGIPIAVSGSPRVQRSPMPARAAMMKQRSRLGSHNDNISSGSL NSIEV" ORIGIN 1 gatgtacatc ctgttaatga actttaccag ttgtaaatgt taattaaagc atcttgaaaa 61 taatttctac taaagtttta aagttcaatg taattggaat ttaaagcagc gtagaagaaa 121 gaagtcaaca taaaattttt gcaaatttta tgcgccaaca acaaaagtga caagcacaat 181 gttgccgaca acaggaacag caacaaccac agcagcacca gcaccagcac cgccaactgc 241 ttctacgacg acaacattat ttcataaaaa cacctgctca tcattgctgc cgccttttgt 301 tcgaacctca ttatgctcat cttccggcgg cttttttgcc ttctcgccac tatctgtcat 361 cgttaaatct gtgattttct ttttggcctt tgcaacaagt gcctgccttg cctctcaacc 421 ccccacatta ggggtccact ttgtgcgatc tcctgagtca gcggtggcac ccaagggaga 481 tgaggtggtc tttgagtgtg aaatgaattt aggtcccgaa cgtttagagt ggaaatttcg 541 tcactccagc aatcgaacgg cagatggaag tcgatttatt tatctatcca aggagagtgg 601 ctacaacata accaacgatg aaaagaattc caaattacgg ttcgtcgtgc aacccgagac 661 cttgggcgac tatcaatgtg tagcctggta tggctctgcg gccattgcat ctctgtcagc 721 tcgtttgact ttggtctcta tatcgataga caattcaaat ggctactccc gtaatgccat 781 acgctggaat gtggccccga aaaatcacat attactgaga tatggaacgg tctcatccaa 841 tcctgctgcc atatggagtt tttatcgcaa tggtgaaaaa ataccacaat cagaagtaat 901 accagcaaac ggtgccttag ttctgaacac tgtgacagct aaagattcag gcaactatac 961 ctgttcggcc atgaatccca taacaagtca agaggttaaa ttgccacaac gcattgattt 1021 gagggtggac tatagtgatc gcaccccacc ctattttttg actcagccac caacgcaggt 1081 gacagctaga ccgggagaaa cggtggtctt ggaatgccct ggtgtaggtt cacccccacc 1141 cgtagctgtc tggagttcac ccaatattat caatatgaat aataataata ggacgcggtt 1201 attgccttat ggcctacaaa ttgtcgatgt ggtgcctgag gatcaggcac aatatgtttg 1261 ccgtttggat aatggcatag ccccggcctt ggtacatggc attaaattga atgttttgga 1321 aaaaccttct atactaaggg gtccagctct tactttgacc aatgaaagtg atacactgga 1381 actggaatgc tcagctgctg gaaatcctta tccagacatt tattggctga taaatgatgt 1441 ggataccacc atggatccgg aaatgcaaca tgatgggcgg cgtttggtta tacgacatgt 1501 gcagaaacgt catgcgggta tagtgcagtg ctttgccaaa aatgaagtgg gagaggttag 1561 cgatgccaat cttttgaaaa taaatcccag acaaatccat ggttcttcag cttcggctgc 1621 tacccctaga cccagatacg aagatgtggg tggtggcact aagaaaggtt cccgcaagaa 1681 gcataagcct accatggtgc caccttcacg tcccaatgtc actcgtttat ccgatgattc 1741 ggttatgctg cgttggtatg tgcccaaaaa tgatggtcta cccatacaat tctttaaagt 1801 acaatatcgc atgctgggcg atgcttcgcg caaaattccc cgagaaaatt ggcaaaccac 1861 caatgatgac atagcctatg gcaaacgtaa taccgatatt agcaagaatt atacaacatc 1921 agtgaccggc ttgaagccag atagatttta tcgttttcga attgtggctg tctataataa 1981 tgatgacaac aaggaaggca atacatcatc gaaattcttc ttgcaacgtg gtgatgcttt 2041 ggatttatct aaatcgaatt tacctatacc agaactggca cgcattgagg ctttatccga 2101 gtcggcagta atgctgcaat ggtcattgcc tactgccgcg gccacatcac atatagatgg 2161 tttctatgct tactataggc cggcagcatc ggctggagag tatcaaaagg ctacagtaga 2221 tggtatgcat accaggaaat tcaaaattga tatgttggaa gctggtacag cctatgaatt 2281 taaactgcaa tcatttaatg acatggctgc ctcggagttt agtgctatag tacaggggaa 2341 gacaaaaaaa tcagtcacca ccccagctcc tacgctgccc gctgtggtac cagccaccaa 2401 agccaatcaa gaggacaatt caatatttcc cgtagttgca ggagcagctg gaggtggcat 2461 actgttatta atagccacca tagcagcttg tctgtgtatg aaaaagagaa agaattctca 2521 aaatgaagat gaaaataaac cccagctgga tcatattcaa gctgattttg ttacacctca 2581 agtacaagtt ttgggtgtca acaatcatca taagggcaat catcgtttaa atggagtatt 2641 accacgcatg aatataaccc caaatccttt ggcccaagag gccgataaga atcgtaatgt 2701 catggaattg cgctttatga gcaacaccaa cagcgccagt agtccggcca acagtaacag 2761 taatacaaac agcaataaca gttgccacaa cagtcaggag aaactaaata gttataatgc 2821 cgaagaagcc ccacatacac cacctcaacg ttccacctca tcgtgtgaaa cattagaggc 2881 tgtagacggc ataaatagtc ctctaacacc caatggtcta gatgccgaat cgccgctctc 2941 taaacctttg ccaccattgc caagcaaaaa taccaacaaa ttagcaaatc atacaactcc 3001 ttcttcgtta aagaacaata cagcatcgct ttcaaaaagt aatcatcaaa gtaaatcatc 3061 tactaataat ctaaataatt cacaggctca cttagcatcc caaggcatac atcatgcgca 3121 gccctattat cagactcctc caacacctac catgatgaat aagcgggact atcagcagcc 3181 accgccagtg ccacctcatc aaaacaacaa tcatgcgccc atgatgaatc atcatttgcc 3241 gcccacgggt catcatgctc ccttgacacc tagcatggaa cagcaaaggc gcaccctgga 3301 tcgaggggtg cgcaatatga attacaatca aagtaatggc aatgccatgt caccgcctcc 3361 acatgatgct gccttgaata tggatggcat ggccaccaga ataccttcac taagaagaac 3421 acgtcgtact tcgggaggta gtaccaacaa tgcactgaat gccttatcga ataatcccaa 3481 tggtggcttg ggtataccca ttgctgtcag tggcagccct cgagtacaaa gatcacctat 3541 gcccgcccga gcagcaatga tgaaacagcg ttcgcgcttg ggcagtcaca atgacaatat 3601 atcttcgggc agtttaaaca gtattgaagt gtagtcttct aacataaagt aaaggagtct 3661 tcaacaaaaa ttgtctacga gtatgagttt tagagaagtg taagttataa gaacaataga 3721 taatttttaa tttaataaga caattagtta taagctatag aaatctttat ttaagttaat 3781 tttataaggt aagcctaatt gtgtaaaatc ctaaaaaaat atgctgttat gtcttaggta 3841 tcacagatta aatataagtt gtatatacat attcctatta atgtgaggtg atataagaat 3901 ttgtagttta cagcgaagaa agtccggcgc ataacttttc aaccatttct caaaattttc 3961 aaaaaatgcg agtttttcat ttccattttg aattaaaatt gtatacattt ttaattctgt 4021 acgctatttc tctcaagggg gagaaagtcg acttttgttg gcaaatgtgt atagatctta 4081 tatcgcctct acacacatca tcgagacttt tatattttga agatcatatt aattttgaat 4141 attaaacaac tcgaatccta tttgtaaaag acttaaatcc cattagttaa gtatatgtct 4201 gaatagagca tgacagtatg aaaagctcaa aagatagtca atcttatatg actatctttt 4261 gatagcgaaa ctaaaattcg aatattttat tacatacata tatatttcat tttattgcat 4321 aatagtgctt aaacgtatgt tgatatctta aattcataac atggcaatat ttttaagata 4381 ccagtataat gggtcacatt atatttgcac acaaaacatc gatccttttg atggcaagat 4441 ggtgatttca ccatatggtt tttatgttgt tgtgtgagac aacctttaaa taattcagcc 4501 atgggtgttg tcctatctta ccatattcgg ttcgaacatc atgaatcctg ctgtagctca 4561 ttattcaaaa taacagcgat ataggcttta gaccctcaat cggaagatcc gtctttaagg 4621 caggtatatc taagtatggt ccgatataaa ccacacccaa gtcctactta tcacagactg 4681 cacttttgta cttttgtcca ttattgttaa ataacaacct tttagaataa ttttacttat 4741 tttatgccaa ataagtcgtt taaattaagc gacgtctgcc cacaatttag gcagctaagt 4801 tatgccgcac gcaaattgtt aacctaaacg caaatgaatt tacaattact gacaagggac 4861 tttgctcaat gaaacgtcaa aatttgctgt gctgccaaaa atcttactgg cccttgggct 4921 actcaaaaat tattcaccac acttgacgtc atattttgac tatccccaca actttgctac 4981 cattcgacac atagtcttaa caataatgcc tcatgaaatt tatgttgcag tattaacaaa 5041 tgaaatttgc aacactctca actggtgtga atggttgaga tgttttccat aactacaata 5101 cattagcaaa atttgtcagt gtaaacatag cattagttca aaatgttagg ataatgaagt 5161 tatacatata tatttgcctc cacaatggga atttaagaca tcaacatatc gtattttcaa 5221 aagcaaaata ttgaggctta acattttatt ttctaatgcc gaaagcacat tataaaaaat 5281 gagcacagaa acgaaataat aaagaaattt taaaaaaaat tagttttctt atcgaatgta 5341 tataaataaa aatttataac taattttgta tagactcttt aaagttagtt aagttaattt 5401 ataatttaaa aaaagtaatc aaaacacaaa ttattttttt aagaatccat gtatgaaacc 5461 aataacacaa atctattgat cattgccgtc ctgtacatgt tttagttgca caaacacata 5521 tatttgtcat tgagtttaat aatatttaat tatttttttt taataatcgg gtgtgttcta 5581 gtaactactt aaatttttcc cgaaaaaaaa caaattgtaa ttattacata aacaaaaaca 5641 aatcttaatt tcttatgatg aaaaactttt cccagctgta tacatttgtg gtgtagtaat 5701 ttttaactta aactccgttt acactgctca ttaaatccgg attaaaggct ctcgtcagct 5761 gattttatta agggaaagca gtgtaacggg gttttaatat gctttaaaaa tgtttttcat 5821 cccgtaactt attcctttag tattttttct ttttttgtga atacttggtt ataaagccaa 5881 aaaatattat ttgtgagctt gcatacgaaa atattttttt aaaaataaat ttaataaaaa 5941 atgt