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LOCUS XM_059367024 7024 bp mRNA linear INV 02-SEP-2023 (LOC106082136), transcript variant X1, mRNA. ACCESSION XM_059367024 VERSION XM_059367024.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7024 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7024 /gene="LOC106082136" /note="high mobility group protein DSP1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins" /db_xref="GeneID:106082136" CDS 707..2209 /gene="LOC106082136" /codon_start=1 /product="high mobility group protein DSP1 isoform X1" /protein_id="XP_059223007.1" /db_xref="GeneID:106082136" /translation="MEHFHQIQQTLQHYQQQLVAQQQQQAAAAAAAVQQQQQQLQQQQ QQQQHQQQVVVQQNQQQAHQNNANTTSGVGTQQLFTYKMASSFPNPATTMAQVVATSN AAGTPAYDYRLNMAQAAAAAAVPGSQWWYSAANQGQIDANTAAQLQQQQQQQQQQQQQ QQQQQQQQQQQQQQQQQQQQQHQQQQQQLQQQQQQQAQQQQQQNAANVIDSNYLAKSG ATSSSTIISNVIDGIAEKDNNVHKGGVKPPQDDKPLSQGHINNIIRAAGGGKPDAKPR GRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDK ARYELEMQNYVPPKGTVVGRGKKRKQMKDPNAPKRSLSAFFWFCNEKRNEVKAVNPEY GVGDIAKELGRKWADVEPEVKQKYELMAEKDKARYEREMTEYKTSGTIAMSAPSMQAQ QQAAQKAALLAVAAAQQAQQQQQQQQQQQQTVHHDDHDDDDGEGDDDENQ" polyA_site 7024 /gene="LOC106082136" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attgggtgtt gtacagtaaa gtcagagcat tcagttgtct attaaattag aaggcaactt 61 ttggagaggg cttatgttga cgtttattcc aattgcctcc ccccccctcc ccccaatctc 121 tatcgttcgg atatttgtca tatgtgtttt ttttttaaat acgcgaaaga atagaagtaa 181 tgaaatccat gtaatgatga tctaaatgcc aagtgtgtgc aagaaaagtt gaaaaatatt 241 gtggaaagag agtagctaga ctctttaatg aattcatcag tcgctatgac aatgattatt 301 tgactgatca agtgtttttt attttggtag aactaccaat gataaagaga aaacaagttt 361 gtaagtgaca acgttgaaaa aaagcgcgcc taaatttttc ttttgaaaac aacaacagca 421 attaaagtga atttaagaaa gaccaaatag aaaccaagtg gatataaaac agtgtatagt 481 tgccccacaa gaaagtgttt tcgatatttg aatatcgata aatctattaa gacagaaacc 541 gccaataagg aagtaattgg cttattagca gcagcagcca actaccagca gaacacccac 601 ctaacaccaa caacaactgt gaatatagaa ggcagcaaat tgagtatcat cgtatatgcg 661 ggaataaagg aaaaaagcag acatctttta gaaatacaca gcaaatatgg agcattttca 721 tcaaatacag caaactcttc aacattatca gcaacaattg gttgcccagc aacaacaaca 781 ggccgctgcc gcagccgctg ctgtccagca acaacaacaa caattgcaac agcagcagca 841 gcaacagcag caccaacaac aagttgtcgt ccaacagaat caacagcaag cccatcaaaa 901 taatgccaac accacttctg gcgttggcac ccaacagctt ttcacataca aaatggctag 961 tagttttccc aatccagcca cgacaatggc ccaagttgtc gccacctcaa atgcagccgg 1021 tacacctgcc tacgattatc gcttaaatat ggcccaggcc gcagccgccg ctgccgtgcc 1081 cggttcacaa tggtggtatt cagcagccaa tcaaggacaa atcgatgcca atacagccgc 1141 ccaattgcaa cagcaacaac agcaacagca gcagcaacag cagcaacaac agcagcagca 1201 acagcagcaa caacagcaac agcagcagca acagcagcaa caacaacagc atcagcagca 1261 acaacagcaa ttgcagcagc agcaacaaca gcaggcgcaa cagcaacaac aacagaatgc 1321 ggcaaatgta atcgattcaa attacttggc aaagagtgga gcaacatcgt cttctacgat 1381 catttcaaat gttattgatg gcattgcgga aaaggacaat aatgttcata agggcggtgt 1441 aaagccacca caggatgata agcctctatc ccaaggccat attaataata taatacgggc 1501 tgctggagga ggtaaaccgg atgctaaacc acgtggccgt atgacagcct atgcctattt 1561 tgtacagaca tgccgcgaag aacacaagaa aaaacatccc gatgagacag ttatatttgc 1621 ggaattctcc agaaagtgtg ctgaaagatg gaagacaatg gttgacaagg aaaagaaacg 1681 attccacgaa atggctgaaa aagataaagc tcgttatgaa ctggaaatgc aaaattatgt 1741 gcctcctaag ggtacagttg tgggtcgagg caaaaagagg aaacaaatga aggatcctaa 1801 cgcgccgaaa cgatcattat ctgccttctt ctggttctgc aatgagaaac gtaatgaagt 1861 gaaagctgta aatcctgaat atggtgtcgg cgatattgcc aaagagctag gacgcaaatg 1921 ggctgatgtt gaacccgagg ttaaacagaa atatgaacta atggctgaaa aggacaaggc 1981 acgatatgaa agggaaatga cggagtacaa gacaagtggg acaattgcta tgtctgcacc 2041 ttccatgcaa gcccaacagc aagcggcaca aaaagctgcc ttactagcag tagctgccgc 2101 acaacaggcc cagcaacagc agcagcagca gcaacaacaa caacagaccg tccatcatga 2161 tgaccatgat gatgacgatg gggagggtga tgatgatgaa aatcagtaga tttaataata 2221 atattatgcc caaatgttgc ttatgaaata taataccaac cacaaccaat caaccaacca 2281 accaacaaca cataatattc aatcccctag aatcacaaca acaacaacaa ttccaactac 2341 ttcaaaaatc aaaacaatca aacaccaatc cggcacgcga tctttcttct ccttctatga 2401 attttatttc ttttttaaca ataatttaat ttttgttttt gttctttttt cccttctcaa 2461 gagtgacatc tagaattacc actttttctc tcacttttca acaaaagcag caacaaagca 2521 aacttacaca gggcatcgaa cagaacagaa ttcttgatgc tgaaatttta tgagatgtat 2581 tgtgatagaa tgaatatttg aaggtaactt ttttaaaaca aaaaaaaaaa aaataataat 2641 taatataagt aagcccttaa cctatgatga agatttcctg aaaatattca tgaaatatga 2701 attacttgtt atatttagca gcaacttttg tcatatatcc aaaatcttaa ctacctctcc 2761 ttcagcattg gaattcaaat atgacgcctt agcctatgct cgttgttcgt tgtcctgtgg 2821 tttagtgctc ttaattttgt tttaacaact tctcaaggac catttgacca ttattcaaac 2881 atttgcataa caatttatat tctcttttaa ggaaatcagt ttcatttttt acaatacgct 2941 ttaatttttg taaaactcat caagaaagaa aaattactgt gtaattttta tttaacgaga 3001 aaaaatatat atacatacat cgtttttttt aatcatgtat ttgttttctg caaattacat 3061 aagtaactga gttataaaag tttatacgac agcagaaaac ttctcttaaa aaaaaaagaa 3121 aaccctaaaa attcctttta ggttatttca aaatcatact ctccgattca acggcatata 3181 caaatataca tactatatat aatatatatt tttttgtttt aatttgaact ataagataaa 3241 aagaaaaaaa acataactaa tataaatatt gtaaagtgaa ctttttttta tatagaaaac 3301 aacaacaaca acaacaacaa tattaaaacg aagaattatg gcgtttttta tttactattt 3361 aaaatcattg atagtaattt aggtacagtt ttcttcagag atttttcaca ttttcttatt 3421 taacacccaa acacattcgc cattaaaatt atttgttttt attttcactt ctttgtgttt 3481 atagtatttt tttgtttgtt taacatttac aaagtgtaaa atattcagca ccaacaacca 3541 cacataacaa gaacaacaca tttttgcaaa tatcatccct ttctctcata cacattcatc 3601 cacccactct ctatctcttt atctcgctcc ctatcttttt ttgtatggga caaaagaagg 3661 ccgaaattaa aaaaaatatt ttaacacaat aaaatccatc ataagtactt ttcttattat 3721 tataccgtat atataataat gaacaaaaat ataataaact caaaaattta gaaaataaag 3781 acataagata catttttaga aatataaatt acaaaaaata tgatctttaa tttcgttttt 3841 ctaaataaat tgtgtattga gatttagaga aataaattta aaataggact tgtatgtgtc 3901 ttcccacttt cactgcattg taaaatgatg gcataagatt tggaattttt gtgttaattt 3961 ctctttgcta ccatatgatg ggtcgcatag gctagtatgc attgtgccat ttcagggatg 4021 ataattttgg tacttttttt gatggttttc aaacatcaaa agtacccgcg cgtcattggt 4081 atttttttcg tgattagcca tttttaatta ttttcgaggc cgcaagaaag gaaagagttt 4141 tcattttata attgaacgtt actaaagttt ttcctgaata taattgatga tataaaccta 4201 aaaatgccaa cagagcaaaa actccaatga tgagggatat taccttatat taatagatta 4261 ccttatatta atatatgtat attacccaat gaaccttata caaaattaga gaattggttg 4321 gacctcatgg aaatcgaatg aatgaaccct tcgttagcac acaaaggcaa attctagtaa 4381 atatcaatga gtgcagtccc attccagttt taaactcaat gataaggggc ctccttttta 4441 tagccgggtc cgaacggcgt gccgcagtgc tacatctctc tggagagaaa ttttacatgg 4501 catagtacct cacaaatgtt gccagcatta ggaggggaaa accacagctg aaaaattttt 4561 tttgatggtc tcgccaggat ttgaaccctg ccgttcagcg tcatatgcgg acatgctaac 4621 ctctgagcta caattcaagt atatggcggt tatatcgaaa tgtgagcttg tgtagaaaat 4681 acttagatca tgcgtatcga aatcgggatc cctgggaacg gggttgaaag attttttttt 4741 tatttaaaag taatctaatg gaaaaatacg ctctatgtaa gaggtaaaat ttcctaattt 4801 tcgctctaaa tgggagctat ctcaaaatat agttcgactt cagactcgga ataacaaggg 4861 catttcttat cagtgaactg aaaacaaaga actgaaggaa ttttcgtggc caaagtacac 4921 ttgcatttta tacgagcgaa atggcctgcg cacagtactt tttttttgta ttcatcactg 4981 ttatgtcttt gaacaaattt tgttaagata ttagaggaag ttacggccat aaacagcaaa 5041 aaagtacaac ttttctattg agccactaag agctatattt tgtaggtttt cataaaagtt 5101 cctttttaaa ttggtttcaa tatcacctcg ttcacctgtt ccacttcaat atcaatttga 5161 cacttttttc gaaggtctaa tttgtgagcc atttttctat tgagccatcg agaggagcca 5221 tattgaaaaa aaacctccag cagaatttta caagctttca attatcaaac tcaaaaattt 5281 gctcgctctc acgctttcgc gctcttctgc tggcaaataa agtattcgaa tgatatccag 5341 tccaaatttg cataattaat aaccgttttg catattttag catgtctgcc tatgacacag 5401 aacgcctgtg tgttcgatca attcagaagt actcgtatat gtgtgttcgc gcactcaaaa 5461 atttgtgcac acattgttaa tgaaagtcag tgttgctagt attggggatt tctccccaaa 5521 tcggggattt attttcgata atggggacga aattgttgac atgggaattt gatagctagc 5581 gcaggttcac aaaagaagct taggtcactt gcccagctga tagaattttt caattccaga 5641 gttttagaca aatctcacaa gaacgtcaaa tgctttgttt ggagtttaaa ctttttttca 5701 taagttgttc ccttttgcac attgtaatca taagtctttt gatcttgtgg ctgctacaca 5761 tgataatgca aataaaaact agaatatcca ttaggaagtg tcccacattt ttggatagcc 5821 tagtgggaat ttgcgttgat ttcgttgttg ttgtgaaagt gatttaagct tttaaattca 5881 actcgatgca aaaattggct atgattttga taaacattta cacaggcgtt cacaaaactt 5941 gatgtgtata tgaaatagac ttatttacca gatttccttt acagaactgt caaataatca 6001 tatattaagg cttcattact tacttactta ctttaattgg ctatgacaga atatttgttc 6061 caatagccgg acgtagaata tcgttccatg cgcctcaatc ttctgagatt ctaaaatctc 6121 tgacaccaag tttcgtggtg tctcccacca cttgatcttt ccatcgagct tttggtcttc 6181 ccgttttgcc ttcaaaagac ttcttttccg gagcttcttc atccattctg acaacatgac 6241 ctagccaaag cagccgttgt attttgaaac gcgtgactag gctatcgtcg tcatacagct 6301 cgtggttaat acgtcgccta tattctcaat tatcgcaaac tggtccatat attttacgaa 6361 gaatctttct atcaaatact ccaagcactg cctcatctgc tttcacaagt acccatgttt 6421 cagaaccata taacaacacg ggtagtatca gtgtcttcat taaaaaaaca taaatcggaa 6481 gtatttacat caagttaaac cccgtttaca ctgctaatta aatctggatt taaggctctc 6541 gtctgatttt ataaagggaa aacagatcat cgagccatta aatccggatt taaacagcag 6601 tgttaacggg gttttacttg ttttttttat tggtatttaa tatctgttat cgcatgatat 6661 cgataactat ccaagacaac tttgcactga aattgtatac agaaaatcga acttgcactg 6721 gattggacta aaataagaca cttgttgtgt tctagtttaa tccaaacctg ttctgttctt 6781 actttcctgt aaatttttac tggaaaagta agcgaacaga cctaatatca gtgttttgag 6841 cattcagcta ctaagtattt gtaaaaaggt acgcacttca ataaagaaat ggaaattttt 6901 attacaaatt tgcccgttgg caacgcaact tgagttgggt tgctacccct aagtcccttt 6961 ttcttagtac aatacagtgc aaaggatatg ttatcgaatg ttattgcatg ccatagataa 7021 ctat