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LOCUS XM_059366975 4887 bp mRNA linear INV 02-SEP-2023 transcript variant X1, mRNA. ACCESSION XM_059366975 VERSION XM_059366975.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4887 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4887 /gene="LOC106092705" /note="protein stoned-B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106092705" CDS 1..4155 /gene="LOC106092705" /codon_start=1 /product="protein stoned-B isoform X1" /protein_id="XP_059222958.1" /db_xref="GeneID:106092705" /translation="MANPFLMDDDMGGMADDATVNPFLIQSSSTDAAEDNPFAADSAA NPFAFGDDGEGEGQVGDIDPAMSFFGTTIEAEDDVLSIKSTAEEEDQSKKGPPPRPVP PQTQELINTVSNQMDETSSELLGRIPATRSPSPVSMRDLHSPSPTPDSGLADLLDCSD SGSSAQGTHGFGDADLMTSGGNAGPNDNPFAIPTGIPNIHGTSPVPPPAKQQPPRPPP PRPAPPRPVPPSMPGQHAQPPPPPRPAPPAVLAQNETAAADATVPTSESDDLFMFGTA PPPKPPPPKSKEDILSLFDKPSQPVAKPDLLSDDLELDPTAAEPEVESAEAVDDPIFN SVLTRPDESTHNITSEPQSAHARQANANRIAPQELTNKQRAPTPDIEITTVEDLPRSD DEEEPEPQTQPPKEAAAADQKEDSGEEAETQPKVEPLRDVPVMVIETEPTPPAEDEED EDKSIVPKTTESDQSPPTESAQTNTAADESGVDFGAGDSHYESHEPVVEEMDTGLDFA PPSGTGSANPFASPDEEEETFPPAGMVTNIFAADDAVVEENIFTTMAGTAASENIFTS MADSGTADNIFTSMAEAAPVSVAENIFTSMADGVMAGENIFTSMADTTSVAENIFTSM ADSTPIPAAAAINIFAADPEPEVDTTQSYGTNIFAEPDEFDAFAAKFESVKKDNISIL DGFGGGAGSGAVTPTTADAWGDSAFGTPKSGVDAFGDSADGFGNDDDEFYAMKAPIRS ESVESVEKDFNVVIRPKTEGASTVAPQLAPPPPTRAAPAGQYDDTSAVNPFEESGFPA PPAVDPTLKRTDSQDTPQTPLFDEDVSQPLEEFPRLHYVGPGWEMQLRQPNKKKITGQ RFWKKIFVRLVIQNDVPVVQLLNQATDKQPFQELPLQPSYSVSEIGAQQYDQFGKIFT MKLQYIFYKERPGVRPGQVTKAERITNKLTKFAQYAIAGDYEGVKEFGSDLKKLGLPV EHAPQSSQLFKVGSMNYEDMKQFSICIEEALFRLPALRERALTYKMEEVQVTAVDEIV VDQDSEGKILKQIARVRVFFLAFLTGMPIIELGVNDMWRQGKEVVGRHDIIPVATEEW IRLEAVEFHSVVCQDEYEKSRLIRFQPPDANYIELLRFRVRPPKNRELPLQLKAQWIV TGNKVELRADILVPGFTSRKLGQIPCEDVSVRFPIPECWIYLFRVEKHFSISTSSWPN MNPRYGSVKSAHRRTGKIKGIERILGAVDTLQESLIEVTSGQAKYEHHHRAIVWRCPR LPKEGQGAYTTHQLVCRMALTSYDQIPSELAPYAFVEFTMPATQVSHTTIRSVSVQES ESDEPPEKYVRYLARHEYKVGIETTHGESTNAYLAATRPIREEPTQKPAASPVPPPSD SDSDSN" polyA_site 4887 /gene="LOC106092705" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atggcgaatc cctttttaat ggacgacgat atgggaggca tggcagatga tgccactgtc 61 aatcccttcc tcatacaatc aagcagcaca gatgctgctg aagacaatcc ctttgccgct 121 gactccgcag caaatccctt tgcttttggt gatgatgggg aaggtgaagg ccaagttggt 181 gatattgatc cggcaatgag tttctttggc acaaccatcg aggcggagga tgatgtcctt 241 agcattaaat ctactgctga agaggaggat caaagcaaga aaggccctcc ccccaggcca 301 gtgccaccac agacgcaaga gcttatcaac acagtatcca atcaaatgga tgagaccagt 361 tcggagttgt tgggacgcat accggccaca cgttcaccca gcccagtgtc tatgcgagac 421 ttgcattcac ccagtcccac acctgacagt ggtctagccg atcttctgga ttgctcggat 481 agtggatcct cggctcaggg cactcacgga tttggtgatg ctgatttaat gacttccggc 541 ggcaatgcag gaccaaatga taatcccttc gctattccaa caggcatacc caacatacat 601 ggtacctcac cagtaccacc accagcaaag caacaacctc ctagacctcc accacccaga 661 cctgctcctc cacgaccagt accgcccagt atgcccggcc aacatgcaca gcctccacct 721 ccgccaagac ctgcaccacc tgctgtatta gctcaaaatg agactgctgc tgctgatgct 781 actgttccaa catccgaatc ggatgatctc ttcatgtttg gcacagcgcc accaccaaaa 841 ccgccacctc ccaagtccaa ggaggacata ctgagcctat tcgataaacc atcgcaacca 901 gtggccaaac cagatctctt aagcgatgat ctggagttgg atcctacagc tgctgagcct 961 gaggtggagt cggccgaagc agtcgacgat cccatattca attcggtgtt aacccgaccc 1021 gatgagagca cccacaacat aacttcagaa ccacaatctg cccatgcacg tcaggccaat 1081 gccaaccgta ttgcacccca ggaactaacc aataaacaac gagcgcctac tcccgacata 1141 gaaataacta ctgtggagga cttgccccga tccgatgatg aggaagagcc agaaccgcaa 1201 acccagccac cgaaagaagc cgctgctgct gaccaaaaag aggattcggg cgaagaggcc 1261 gaaactcaac ctaaagtaga gcctttgcgt gatgtccccg ttatggtaat tgagacggag 1321 cccactcccc ctgcggaaga cgaggaggac gaggataaat ccatagtacc taaaaccaca 1381 gagtctgatc aaagtcctcc cacagaatcg gcacaaacaa ataccgcagc cgacgagtcg 1441 ggagtggatt tcggagcagg tgattcgcat tacgaatcac atgagccagt ggtggaagaa 1501 atggatacag gtttagattt tgccccaccc agtggtaccg gctcggcaaa tccctttgcc 1561 agtcccgatg aggaagagga gaccttccct ccagctggta tggttacgaa tattttcgct 1621 gccgatgatg cggtggttga ggaaaatata ttcaccacta tggctggcac agcggcatcc 1681 gaaaatatat tcacctcaat ggctgactca ggcactgctg ataacatatt cacctcaatg 1741 gcagaggcag ctccagtgag tgtagcggaa aatattttca cctccatggc tgatggggtg 1801 atggcaggcg aaaacatatt cacctcgatg gctgatacca cctctgtggc ggagaatata 1861 ttcacctcca tggcagatag cactcccata ccagctgcag cagccatcaa tatttttgct 1921 gccgatccag aacctgaagt ggacaccaca cagtcctatg gcacgaatat tttcgccgag 1981 cccgatgagt ttgatgcctt tgcagccaaa tttgaatcgg tgaaaaagga taatatcagc 2041 attttggatg gctttggtgg gggagcaggt tcaggggcag tgacaccaac aacagcagat 2101 gcttggggtg acagcgcttt tggcacaccc aaatcgggtg ttgatgcttt tggtgattcc 2161 gccgatggtt ttggcaacga cgatgacgaa ttttatgcca tgaaagctcc cattcgctcc 2221 gagtcagtgg aatctgtgga gaaggacttt aatgtggtca tacgtcccaa aactgaggga 2281 gccagtacgg tggcgcctca attggctcca ccaccaccca cacgagccgc tcccgccggc 2341 caatacgatg atacatccgc tgtgaatccc ttcgaagaaa gcggtttccc tgctccaccc 2401 gcagtagatc ccacactgaa acgcacagat tcccaagaca ccccacaaac cccactcttc 2461 gatgaggatg tctcacagcc gcttgaagag ttccctcgcc tgcactacgt tggacccggt 2521 tgggaaatgc agctgcgtca gcccaacaaa aagaaaatca ccggccagag attttggaag 2581 aagatattcg tgcgtttggt catacagaat gatgtacccg tggtgcaact gctcaatcag 2641 gctaccgaca aacagccctt ccaggaacta ccactgcagc cctcgtactc ggtgtccgaa 2701 attggagccc agcaatatga tcagttcgga aaaatattca ccatgaaatt gcaatacata 2761 ttctataagg aaaggcccgg agtgagaccc ggccaggtga ccaaggccga acgcatcacc 2821 aataagctca caaaatttgc acaatatgcc atagcgggcg attatgaggg tgtcaaggag 2881 tttggcagtg atctgaagaa attgggcctg cccgtcgaac atgctcccca atcgtcgcag 2941 ctctttaagg ttggctcaat gaattacgag gatatgaaac agttttccat ctgcatcgag 3001 gaggccttat tccgtttgcc cgccctaaga gagcgagcgt tgacctataa aatggaagaa 3061 gttcaggtga cagccgttga tgaaattgtg gtggatcagg atagcgaagg caagatattg 3121 aagcagatag cacgagtgag ggtattcttt ttggctttcc taacgggtat gcccataatt 3181 gagctgggtg tcaatgatat gtggcgccag ggcaaggagg ttgtgggtcg tcatgacatc 3241 ataccggtgg ccactgagga atggatccgc ctcgaggctg ttgaattcca cagcgtggta 3301 tgccaggatg aatatgaaaa atctagactt ataagattcc aaccccctga tgcaaattat 3361 attgaattgc tgcgcttccg tgtgagaccg cccaaaaatc gtgaacttcc cctacagctc 3421 aaagcccaat ggattgtcac cggcaataaa gtggaattgc gtgccgatat tttagtgcct 3481 ggtttcacct cgcgaaaact gggtcagatt ccttgcgaag atgtctctgt tcgttttccc 3541 atacccgaat gttggatata tctattccgt gtggaaaagc atttcagtat atcgacatca 3601 tcgtggccaa atatgaatcc aagatatggt tcggtgaagt cagcccacag acgtactggt 3661 aagattaagg gtatcgaacg aatattggga gctgtggaca ctctgcaaga gtcactgata 3721 gaagtcacct ctggtcaagc gaaatatgag catcatcaca gagccattgt ttggcgttgt 3781 ccacgattgc caaaagaggg tcaaggtgct tatacaacgc atcaactggt ttgtcgcatg 3841 gccttaacct cctacgatca aatacccagc gaattggcac cctacgcctt tgtggagttc 3901 accatgccag cgacacaggt atcgcataca accataagat ccgtaagtgt acaggaatcg 3961 gaatccgatg agcctccaga gaaatatgtc agatatttgg caagacacga atacaaggtt 4021 ggtattgaaa ctactcatgg agaatctaca aatgcctatt tggctgctac caggcccata 4081 cgtgaagagc ctacacaaaa gcctgcagcc tcgccagtac cgccaccaag cgattcggac 4141 tcagattcaa attagattta gtgaaactca aaacagcaaa gaccctagta aatatatgaa 4201 ctaaactaaa ctaaagaaaa atgacaaaca ggctaatgct gcaaattaga aaaagaaaaa 4261 aaaaacacaa tccaatagaa aactcattca gtatttcgtt gcttaccagt ggaaaccttt 4321 ttggaagaaa gttacttcaa taccaacaat tcctatatat atccacactc accctctaaa 4381 catataaaca taccctacgt atatactcat acaaaatcaa tctcaaaaaa gtgtgaatgc 4441 ataaattcat tatttagtaa ctttaacaac attatacata caaacattat atacaacaac 4501 aagaacaact gctaatcgat ctttatatta taagcttata tttaacaatt aaacaaaagc 4561 gaaaaccaaa aaaaaaacca actaaagttc caatagaaaa aaaaacaacc atattaacaa 4621 aattaaagaa aacaaaaaca cagaattaat tgttaaatgt ttaaattgaa atattaacta 4681 aaaacaaaaa atatcctaat cgaaatcccc aggaaaagaa tctaaaaaaa aaaaaatcat 4741 gcgtcacata tagagcgatt cataaaatat atatccctta aatttcagtt taaaattaaa 4801 aaaaaaaaaa tccagttcag accattgact tatactatca aaagaaatga ttataaaata 4861 aaggaaagca tatttataca taactta