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LOCUS XM_059366942 4486 bp mRNA linear INV 02-SEP-2023 transcript variant X6, mRNA. ACCESSION XM_059366942 VERSION XM_059366942.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4486 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4486 /gene="LOC106090138" /note="protein Tob1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins" /db_xref="GeneID:106090138" CDS 1226..2878 /gene="LOC106090138" /codon_start=1 /product="protein Tob1" /protein_id="XP_059222925.1" /db_xref="GeneID:106090138" /translation="MHIEIQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFQGHW YPEKPFKGSAFRCLKTGDPIDAVLERAARESGVPISDILENLPNELSVWVDPGEVSYR IGEKGAVKILYSENSDNQEDNSSADGEVNKTFNPEAQCFRPIDAVNTSMNSLSLSPKT SPMAGSSPLSATSNSPTYKGSPNPATAAGVNSVPFMQRSQAPLTFTTATFAQTKFGST KLKTNSKRSNNTSYRMSPTEFSNYIKQRAMQQQQIHHGHGHSPNGAGGPAQPGNHFGP IGPVSPARSLSPNPLSLGLGQNGGGDPFYFPSMAMGMYPQFNNHHRNLFDATHFHGAE SNGLFAPTNNGVGHGKFNNYLEPHGFYNMSGNHHMPQQHQQQHQQPQSPIAMNGGGGG VIGNGVIGGPGHHAVGNMKNSNENITNSGKDVAGGNVNTAVNTNNSNNNNNNNNAANI TVTVTNGSTNDSTAVSPVPPPSAVVAANAERQNAANAVAAVAVAAATATATATNSSST PQDSSAAAAATSNAAANSKLIDGLNSFYSNATGSYQQLLVAN" polyA_site 4486 /gene="LOC106090138" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaacttgtac aaacgcacga aaagggcaaa aataagagcc aacaacaaat aagagagagt 61 gcatgtttgt ttttgtttaa ggaaattgaa aataaatcca agaagtgtaa cccttaaaaa 121 aatccaaaaa aagtgtttat aaaaaaattc ccaaaaatct ccaaacaaca aaaaaatcga 181 aacaaatcct tattatacca aaacaagaat aaacaaaaaa aaacaacaac agctacaact 241 gaatagaaac atattcacaa aataactgga aataaaatcg ctcatacgtt tggtggtcct 301 gttatcaatt cgttcgtttc gctggtacag agaggcgctg ctgcaccaca agcagaacaa 361 tacaaaaaag ccactcagaa tgccgaggcc ttccattcag tctcagtagt agtcaatagt 421 gatgtaccac atacaaggca acggctggca gatgttttca cccatacatg caagcgtatt 481 gggacgtacc gcttcaagaa caagatcatt agttttaacc aacagcggaa attcaacgaa 541 acaaaagcca acccagcaaa caacaacagc aaggaactaa aacagcaaca caaagtgaag 601 tagagaagaa attccatgcg acctctattg ataacaatag accaaaggat ccaagtaaca 661 cccaactact accacaaaaa acagcaaaat atatataaat agctataaaa acaaccacat 721 ttgaacgttg ttagacaaac atatacaaca acaacaacaa aaggaaacag caacaacaag 781 aagtatacca aatcgttgcc aaagaagaaa aaatccataa aattataaca ccagcaacaa 841 aaagtgaact gcaattaaac gaagaaacta cgcctcatca caaaaacttg aaacaaaatt 901 cttttacacc aacaactgca tcctgcgaaa gcgaagtact actaccacag cgacatagag 961 aaacatctac acccctatct acatcttcat acgcttatta cacaaccata gtcctagtcg 1021 tcattaaata ggcctcctat gggagtagac aatcgaatgg acagcaagag ctaaaaatca 1081 ccacccaaca gaatctgtta agtacccgcc attttatttg gtccttaaag ccaagcaaac 1141 aatcgactta gcccagaatc gttacgaccc actcactgac tcattctact tcagtaagca 1201 aaaacgaaac aacgacagaa caaaaatgca tattgaaata caagtggcat taaattttgt 1261 tatctcgtat ttgtacaaca aactgccaag gcggcgagtt aatatatttg gcgaggagct 1321 ggaaaaggcg ctgaaggaca aatttcaagg tcattggtat ccggagaaac cctttaaggg 1381 ttctgcattt cgttgcctaa aaacaggcga tccaatcgat gctgtattgg aacgtgctgc 1441 ccgtgagagt ggtgttccca ttagcgatat tttagaaaat cttccaaatg aactttcagt 1501 ttgggtggat cccggtgagg tctcatatcg tattggtgaa aagggtgctg ttaagattct 1561 ctattcagag aacagtgaca atcaggagga taactcttca gccgatggtg aagtgaataa 1621 gacatttaat cctgaggctc aatgttttcg acccattgat gccgtcaaca ctagcatgaa 1681 cagtttgagc ttgagtccca aaacatcacc gatggcgggc tcttcgccgc tatcggctac 1741 atcaaattca ccaacctata agggtagtcc gaaccctgca accgctgccg gagtgaatag 1801 cgttccattt atgcaacgtt cacaggcacc gttgacattt acaactgcta cctttgctca 1861 aacgaagttt ggttcgacaa aattgaaaac caattccaaa agatcgaata acacttcata 1921 tcgtatgtcg cccacagaat tctccaatta cataaaacaa cgtgccatgc aacaacagca 1981 aatacaccac ggccatggcc attcgcccaa tggtgctggc ggcccagccc agccaggcaa 2041 tcactttggt cccataggtc ctgtgtcgcc tgcaagatcg ctttcgccaa atcccctgtc 2101 cttgggactg ggacaaaatg gtggaggcga tcccttctac ttccccagca tggccatggg 2161 catgtatcca cagttcaaca atcatcaccg caatctattc gatgccacac atttccatgg 2221 tgctgagagc aatggtctct tcgcccccac caacaatggg gtgggccatg gcaaatttaa 2281 caattacttg gaaccgcatg gcttctacaa catgagcggc aatcatcata tgccacagca 2341 acaccagcag caacatcaac agccacaatc gcccattgcc atgaacggtg gaggcggtgg 2401 cgtcattggc aatggtgtga ttggcggtcc tggccatcat gcggtgggta atatgaaaaa 2461 ttcaaatgaa aatattacaa attcgggtaa ggatgttgct ggtggcaatg tcaacactgc 2521 tgttaacacc aataactcta acaacaacaa caacaataat aatgctgcca atataaccgt 2581 tacggtaacc aatggcagta ccaacgacag tactgccgtt agccctgtac cgccaccatc 2641 agcagtggtg gctgcaaatg cggaacgtca aaatgccgct aatgcagtgg ctgctgtggc 2701 tgtggccgct gccacagcta cggctacggc caccaatagc agcagcactc cccaagactc 2761 atcagcagca gcagctgcca cctcgaatgc tgcagctaac tcgaaattaa tcgatggtct 2821 caattcattc tattccaatg ccactggctc ctatcaacag ctattagttg ccaattagaa 2881 ttcaactcta ctacactcac agcaacaaag agtcctttaa acatagagac cccaaaagtc 2941 ctaacgtcct ataactctcc ccccgtaaca cactcactct ctctctctca aaaatattgc 3001 agagaagcaa aattaaatga ataattacaa aacattgata gagacaaaaa caaaataaca 3061 gcagcaacaa caacaacaac cagcatacaa atacaactac atacatacat aaatacatac 3121 atatatacat atattttttt aaatgcttaa ctaaaaaaaa caaaaactaa agaagaaaaa 3181 caaagaaaca aaccaaaacg atatattagt ttcatcaagg acttattcaa aaaaaaaaaa 3241 aaaacaagaa aatagaacgg aaaaaaccaa caacatttat ataagaaaaa acagcaaaac 3301 aaaaaatata taaaaatatt tttttttagt tgtttcttat tttttttttt ttgtaattag 3361 ctgtaatttt tttagaacat aataacgtag aagcatataa gcaaacaaaa acataaaaga 3421 acaagaagaa gaagaatgct ggcgaaaaag tcataaaaag tatataaata tatatatttt 3481 ttcactgtta attttttata cacattttaa gaaatactgt ttaatattta aaaaaaaatg 3541 ataacaagta taaactacct aaactaaaga tttcatggaa acacctttta ccccacttga 3601 atacaaacaa agacgagata gaagacgcaa gaaacgaggt ggaaatataa gaggcaaaaa 3661 taaccacaaa tcgttgaaaa gatctataga aattagttaa ttaacttcgt tttagcaaaa 3721 ttttaactta aatcaatgaa gatgaaacta acaaaacaaa aacagctgat caatgtacta 3781 gatttgatgt ccaatggatt actctttagt acatgaggat gagacaaggg atttgtatca 3841 actattggat taaatgatta tcttaaccag tgatgggcac actacctttg ttgaaaatac 3901 caaacagtgt ttgtatgagt atcatcaaac ataaactaaa tgaaatagtt tgaaactaga 3961 gtcagctgat tgaagcccca cgaagttgtt tacactgtcc gtgagctttt gttagttttt 4021 tctatgacac tctccaataa tgattaaccc cctaaaaatg caatattgct ttttgatgca 4081 acgccagctg tttgcttcaa accagctgtt tttttctaca aaatcagctg attatgatgt 4141 tgatctagca aaagaaaact ttcaaaaaac aaaatgttca aatgttgcaa cttttgtgag 4201 tttggttcca taaatgacca caagatgttt ggaagcttga aaagttctac aaaaccaagc 4261 aattatctta attttagctt aattatgtga agatgaaata gatgatcgac gtagtagatt 4321 tgaagggtaa tgggtcattt ttgagtacat gaggataaga tgaacgattt gtatgcgaga 4381 aaagatgaga gaaaaaagat aacaacaaag agaatacaaa caaaaatttg acattttaat 4441 accgtcaaat ttggccggct gttaacagct gtttgcttcc agctgc