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LOCUS XM_059366940 4488 bp mRNA linear INV 02-SEP-2023 transcript variant X4, mRNA. ACCESSION XM_059366940 VERSION XM_059366940.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4488 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4488 /gene="LOC106090138" /note="protein Tob1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins" /db_xref="GeneID:106090138" CDS 1228..2880 /gene="LOC106090138" /codon_start=1 /product="protein Tob1" /protein_id="XP_059222923.1" /db_xref="GeneID:106090138" /translation="MHIEIQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFQGHW YPEKPFKGSAFRCLKTGDPIDAVLERAARESGVPISDILENLPNELSVWVDPGEVSYR IGEKGAVKILYSENSDNQEDNSSADGEVNKTFNPEAQCFRPIDAVNTSMNSLSLSPKT SPMAGSSPLSATSNSPTYKGSPNPATAAGVNSVPFMQRSQAPLTFTTATFAQTKFGST KLKTNSKRSNNTSYRMSPTEFSNYIKQRAMQQQQIHHGHGHSPNGAGGPAQPGNHFGP IGPVSPARSLSPNPLSLGLGQNGGGDPFYFPSMAMGMYPQFNNHHRNLFDATHFHGAE SNGLFAPTNNGVGHGKFNNYLEPHGFYNMSGNHHMPQQHQQQHQQPQSPIAMNGGGGG VIGNGVIGGPGHHAVGNMKNSNENITNSGKDVAGGNVNTAVNTNNSNNNNNNNNAANI TVTVTNGSTNDSTAVSPVPPPSAVVAANAERQNAANAVAAVAVAAATATATATNSSST PQDSSAAAAATSNAAANSKLIDGLNSFYSNATGSYQQLLVAN" polyA_site 4488 /gene="LOC106090138" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agaacgctcg aacatcacac acaattattg ctctacttac cgtttgccat actcgggccc 61 aatattctgc tgtcgtctgt cgtagttaac agttgtcgtg caagaagtgt aacccttaaa 121 aaaatccaaa aaaagtgttt ataaaaaaat tcccaaaaat ctccaaacaa caaaaaaatc 181 gaaacaaatc cttattatac caaaacaaga ataaacaaaa aaaaacaaca acagctacaa 241 ctgaatagaa acatattcac aaaataactg gaaataaaat cgctcatacg tttggtggtc 301 ctgttatcaa ttcgttcgtt tcgctggtac agagaggcgc tgctgcacca caagcagaac 361 aatacaaaaa agccactcag aatgccgagg ccttccattc agtctcagta gtagtcaata 421 gtgatgtacc acatacaagg caacggctgg cagatgtttt cacccataca tgcaagcgta 481 ttgggacgta ccgcttcaag aacaagatca ttagttttaa ccaacagcgg aaattcaacg 541 aaacaaaagc caacccagca aacaacaaca gcaaggaact aaaacagcaa cacaaagtga 601 agtagagaag aaattccatg cgacctctat tgataacaat agaccaaagg atccaagtaa 661 cacccaacta ctaccacaaa aaacagcaaa atatatataa atagctataa aaacaaccac 721 atttgaacgt tgttagacaa acatatacaa caacaacaac aaaaggaaac agcaacaaca 781 agaagtatac caaatcgttg ccaaagaaga aaaaatccat aaaattataa caccagcaac 841 aaaaagtgaa ctgcaattaa acgaagaaac tacgcctcat cacaaaaact tgaaacaaaa 901 ttcttttaca ccaacaactg catcctgcga aagcgaagta ctactaccac agcgacatag 961 agaaacatct acacccctat ctacatcttc atacgcttat tacacaacca tagtcctagt 1021 cgtcattaaa taggcctcct atgggagtag acaatcgaat ggacagcaag agctaaaaat 1081 caccacccaa cagaatctgt taagtacccg ccattttatt tggtccttaa agccaagcaa 1141 acaatcgact tagcccagaa tcgttacgac ccactcactg actcattcta cttcagtaag 1201 caaaaacgaa acaacgacag aacaaaaatg catattgaaa tacaagtggc attaaatttt 1261 gttatctcgt atttgtacaa caaactgcca aggcggcgag ttaatatatt tggcgaggag 1321 ctggaaaagg cgctgaagga caaatttcaa ggtcattggt atccggagaa accctttaag 1381 ggttctgcat ttcgttgcct aaaaacaggc gatccaatcg atgctgtatt ggaacgtgct 1441 gcccgtgaga gtggtgttcc cattagcgat attttagaaa atcttccaaa tgaactttca 1501 gtttgggtgg atcccggtga ggtctcatat cgtattggtg aaaagggtgc tgttaagatt 1561 ctctattcag agaacagtga caatcaggag gataactctt cagccgatgg tgaagtgaat 1621 aagacattta atcctgaggc tcaatgtttt cgacccattg atgccgtcaa cactagcatg 1681 aacagtttga gcttgagtcc caaaacatca ccgatggcgg gctcttcgcc gctatcggct 1741 acatcaaatt caccaaccta taagggtagt ccgaaccctg caaccgctgc cggagtgaat 1801 agcgttccat ttatgcaacg ttcacaggca ccgttgacat ttacaactgc tacctttgct 1861 caaacgaagt ttggttcgac aaaattgaaa accaattcca aaagatcgaa taacacttca 1921 tatcgtatgt cgcccacaga attctccaat tacataaaac aacgtgccat gcaacaacag 1981 caaatacacc acggccatgg ccattcgccc aatggtgctg gcggcccagc ccagccaggc 2041 aatcactttg gtcccatagg tcctgtgtcg cctgcaagat cgctttcgcc aaatcccctg 2101 tccttgggac tgggacaaaa tggtggaggc gatcccttct acttccccag catggccatg 2161 ggcatgtatc cacagttcaa caatcatcac cgcaatctat tcgatgccac acatttccat 2221 ggtgctgaga gcaatggtct cttcgccccc accaacaatg gggtgggcca tggcaaattt 2281 aacaattact tggaaccgca tggcttctac aacatgagcg gcaatcatca tatgccacag 2341 caacaccagc agcaacatca acagccacaa tcgcccattg ccatgaacgg tggaggcggt 2401 ggcgtcattg gcaatggtgt gattggcggt cctggccatc atgcggtggg taatatgaaa 2461 aattcaaatg aaaatattac aaattcgggt aaggatgttg ctggtggcaa tgtcaacact 2521 gctgttaaca ccaataactc taacaacaac aacaacaata ataatgctgc caatataacc 2581 gttacggtaa ccaatggcag taccaacgac agtactgccg ttagccctgt accgccacca 2641 tcagcagtgg tggctgcaaa tgcggaacgt caaaatgccg ctaatgcagt ggctgctgtg 2701 gctgtggccg ctgccacagc tacggctacg gccaccaata gcagcagcac tccccaagac 2761 tcatcagcag cagcagctgc cacctcgaat gctgcagcta actcgaaatt aatcgatggt 2821 ctcaattcat tctattccaa tgccactggc tcctatcaac agctattagt tgccaattag 2881 aattcaactc tactacactc acagcaacaa agagtccttt aaacatagag accccaaaag 2941 tcctaacgtc ctataactct ccccccgtaa cacactcact ctctctctct caaaaatatt 3001 gcagagaagc aaaattaaat gaataattac aaaacattga tagagacaaa aacaaaataa 3061 cagcagcaac aacaacaaca accagcatac aaatacaact acatacatac ataaatacat 3121 acatatatac atatattttt ttaaatgctt aactaaaaaa aacaaaaact aaagaagaaa 3181 aacaaagaaa caaaccaaaa cgatatatta gtttcatcaa ggacttattc aaaaaaaaaa 3241 aaaaaacaag aaaatagaac ggaaaaaacc aacaacattt atataagaaa aaacagcaaa 3301 acaaaaaata tataaaaata ttttttttta gttgtttctt attttttttt ttttgtaatt 3361 agctgtaatt tttttagaac ataataacgt agaagcatat aagcaaacaa aaacataaaa 3421 gaacaagaag aagaagaatg ctggcgaaaa agtcataaaa agtatataaa tatatatatt 3481 ttttcactgt taatttttta tacacatttt aagaaatact gtttaatatt taaaaaaaaa 3541 tgataacaag tataaactac ctaaactaaa gatttcatgg aaacaccttt taccccactt 3601 gaatacaaac aaagacgaga tagaagacgc aagaaacgag gtggaaatat aagaggcaaa 3661 aataaccaca aatcgttgaa aagatctata gaaattagtt aattaacttc gttttagcaa 3721 aattttaact taaatcaatg aagatgaaac taacaaaaca aaaacagctg atcaatgtac 3781 tagatttgat gtccaatgga ttactcttta gtacatgagg atgagacaag ggatttgtat 3841 caactattgg attaaatgat tatcttaacc agtgatgggc acactacctt tgttgaaaat 3901 accaaacagt gtttgtatga gtatcatcaa acataaacta aatgaaatag tttgaaacta 3961 gagtcagctg attgaagccc cacgaagttg tttacactgt ccgtgagctt ttgttagttt 4021 tttctatgac actctccaat aatgattaac cccctaaaaa tgcaatattg ctttttgatg 4081 caacgccagc tgtttgcttc aaaccagctg tttttttcta caaaatcagc tgattatgat 4141 gttgatctag caaaagaaaa ctttcaaaaa acaaaatgtt caaatgttgc aacttttgtg 4201 agtttggttc cataaatgac cacaagatgt ttggaagctt gaaaagttct acaaaaccaa 4261 gcaattatct taattttagc ttaattatgt gaagatgaaa tagatgatcg acgtagtaga 4321 tttgaagggt aatgggtcat ttttgagtac atgaggataa gatgaacgat ttgtatgcga 4381 gaaaagatga gagaaaaaag ataacaacaa agagaataca aacaaaaatt tgacatttta 4441 ataccgtcaa atttggccgg ctgttaacag ctgtttgctt ccagctgc