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LOCUS XM_059366904 6400 bp mRNA linear INV 02-SEP-2023 (LOC106081831), transcript variant X2, mRNA. ACCESSION XM_059366904 VERSION XM_059366904.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6400 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6400 /gene="LOC106081831" /note="anaphase-promoting complex subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106081831" CDS 140..6025 /gene="LOC106081831" /codon_start=1 /product="anaphase-promoting complex subunit 1" /protein_id="XP_059222887.1" /db_xref="GeneID:106081831" /translation="MIAVSEPLLEYIPRGRLAVDEHPGPTEIKQHPHLPSENILLLRL QNVNISAKDEYNEYWCVREIYEECCQKTTTTKNSSKGHNGNKKGMASSLCAGEKKSEL RHGPPEYMCEYVVNSEEELYVKKHTAVWTRGISDERCVLPRLCFTCETPIKFAFFCNK AFIGASKEKSSPEEDEQNITSICLIDQNSLRVYCSNGEDFLSNLEFPISSVWPTRFGI LLEKVSSTTVIQNHSISMPRLFSLGHPLDEICPVLNKSATNVISYLIESDYKIIFSDE NSDLLLLCDTKIGKHFIARLRKASTEEIQYIGTQNETVLGSSHQFSVHKPNLGVTVGG QGSFSQSSMKFTGAQKNSTAHLGRTSLGTSNYTTHISKFLNSAHSLSGAFGNFNRSTP ASPLSNLQSTIGQHSISVQDIRKCGQSQPSKPIVPELCLEHIWTENTYGNNREFGEMS SKAFIHTDLVGQTYLCYLLPRSCKLQMVQLNNYDSKNLQIATKCTSIVAKDAVPLERM NMIAVLDPAGTLILYTGGVLVSKVHIPNTLAGNTSSASKAAPNTASNHPSKSPNTSFP RRSSLLPSAQKPGDTTFEDELHMLSPVHPLQPQLFSRSNNVCLGLRDPAGNRLTLTYS SGKMLRITLPLINETKLVSRCIGALKQVLKRDQFIHMITKWYGARNPPGSSDYCIEQE WDIFRNVLLDLMGYSATMHDVSSGTATSFYAEEPKKRKKNDEIHSGTEEDWQFMLNIL DGNVGMENVGKSQSQQMCNNIETSAILFNTIPAIFYSFHLLYEDFKLDESMHQHLRPL AKFLHQLAFDMQLQSYTFHYSLDFPFLIKNASKTCILTEQHGAQMLHKELLQVAAPNV FQQMEFILKDKDNIPYNYVDGINDLSRNVLQVVSLIIHGHEKIKKWIKLLEFPESVQS HFPKKPKRFISVNVSRSEQVIQMLINMEMTRKDIERLPVGIHLCIAECLEYSRLEPPI GCSPTTYELILRSDLVAHAKLQNHNFTQSLNHNSGYLQKVNIDTEDSLSARCPPSKNG ISQMEAALDDGMDNIDTKLLSLRFPDDMRVAEVRRLLSSSEPVIIDITQSPGTSDHEF IEEQEKQLFTLCTRTMTLPLGRGMFTLRTSIPTPTESMPIPKLCLTGKEPIKGATVEM QQIEFPQNMSLWPTFHNGVAAGLKISPNARDVDSTWIVYNKPKGQADISTEHAGFLMA LGLNGHLKTLSFMSIYEYLVKCDEMTSVGLLLGFSATHRGTMNNTTTKLLSVHIEALL PATALELDIPQNIQVAALMGIGLLYQGTAKRHIAEVLLQEVGRPPGPEMENSIERESY ALTAGLALGLVTLGQGESPAGLRDLQLPDTLHYYMVGGNKRLLTGSQKEKYKLPSFQV REGEQVNIDVTAPGATLALGLMFFNTDNKAVAEWMNPPNTRYLLDLVRPDLLLLRTIA HGLIMWSEIKADEEWLHQQFPANLRFDVEKGAQVNDNEDIDHEAITQAYCNIIAGAAF CIGLKYAGSENPTAFKTLRRAIKLFLGFPGKYVGEFAGRTTIENSLMVILLAISLVFA GSGDLEILRIIRYLRSRIGSQHPHVTYGSHMAIHMSLGFLFLGAGRFTISKTPEAVAA LVCALFPKFPTHSNDNRYHLQAFRHLYVLAVEPRLFLPRDIDTQKLCLCNISVLEVGS KELRRLPMAPCMLPELSSLQKVVVDDPNYWPVSFEKERNWNQLIKALENSACIEIKKR SGCLSHLEDPDRLKSLFSQTLTTEQYICWEIDPKTLERFSNEPYVIGFTDRFLHLDEP ESSNTELALKQHLTMLFYNAVVKDKMHVLPIFMATYNHILRLTTQESNFNDVWQLKLL NCYLDQYSHPHILFPKELISSYIEQFKVFMETCRQKLSAPLRQFLSSHDFESHVIANL TQQDLAHLVAVVIYYQLTPNLLNSLVQAPTNYVGYIKEFRKLDLEANTTQCLLKILQA TSA" polyA_site 6400 /gene="LOC106081831" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 accaaaacaa aacacacaca aacacgcaca tatactcgta gttagaattc cagatcctga 61 tccctagccg ggattcttaa tgctgctttt ttgcttgaaa taaagaaaaa tacctgcaaa 121 tctggatgaa actgaagtga tgatcgccgt atcagaacct ctattggaat atattccacg 181 aggtcgactg gcggtcgatg agcatcccgg acccactgag ataaaacagc accctcacct 241 accatctgag aatatattgt tgttacgcct gcaaaatgtg aatatatcgg ccaaggatga 301 atacaatgag tattggtgtg ttcgtgaaat ttatgaagaa tgctgtcaaa agacaacaac 361 aacaaagaat agcagtaaag gacacaatgg taacaagaag ggaatggcat catcgttatg 421 tgccggtgaa aagaaatcgg aattgcgcca tggtccacct gagtatatgt gcgaatatgt 481 tgtcaattcg gaggaggaat tgtatgttaa aaagcataca gctgtatgga ctagaggtat 541 atccgatgaa cgctgtgtcc ttcctcgttt gtgctttact tgtgagactc ctataaaatt 601 tgcctttttc tgcaacaagg cattcatagg tgcctctaaa gagaaatcat cgccggagga 661 agatgaacaa aatataacat caatatgttt aatagatcaa aactccctta gagtttactg 721 cagcaatggt gaagattttt tgtccaatct tgaatttccc atttccagtg tttggccaac 781 acgttttggc attttactgg agaaagtgtc ctctactact gtcatacaaa atcactcaat 841 ttccatgcct agacttttct ctttgggaca ccctttggat gagatttgcc ctgtacttaa 901 caaatcagca accaatgtca tatcgtatct catcgaatcg gattataaga ttatattttc 961 tgatgagaat tcagatttgt tacttttatg cgatacaaaa attggaaaac attttatagc 1021 acgtctgcgt aaggcttcga cagaggaaat acaatatatt ggaacacaaa atgaaactgt 1081 tttgggtagc agtcatcagt ttagtgtgca taaaccgaat ttgggtgtaa ctgtcggtgg 1141 tcagggaagt ttttcacaga gtagcatgaa atttactgga gctcaaaaaa atagcactgc 1201 tcatttggga cgcaccagtt tgggaacttc aaactataca acacacataa gcaaattttt 1261 gaacagtgcc cattcgctaa gtggagcttt tggcaatttt aatcgttcta cacctgcatc 1321 acccttaagt aatttacaat caactattgg tcaacattcc atatcggtac aggatatacg 1381 taagtgtggc caatctcaac catccaagcc gatagtaccg gaattgtgtt tggaacatat 1441 atggactgaa aatacctatg gcaacaatcg tgaatttggt gaaatgtctt caaaagcctt 1501 catacatacc gatttggtgg ggcaaaccta tttgtgctac ctgttgccta ggtcatgcaa 1561 actgcaaatg gttcaattga ataattatga cagcaagaat ttgcaaattg caaccaaatg 1621 cacatcgatt gtggcaaagg atgctgtgcc tttggagcgc atgaatatga ttgcagtttt 1681 agatcctgct ggaacattaa tactttatac tggaggagtt ctggtgtcaa aagttcatat 1741 tcctaatact ctagcgggca atacttcgtc tgcttcaaag gctgccccga atacagcttc 1801 taatcatcca agcaaatctc caaatacttc atttcctaga cggagtagtt tattgccttc 1861 agcacaaaag cctggcgata caacattcga agatgaactt catatgttgt ctcccgttca 1921 tcccctacag ccgcaactat ttagcagatc caataacgta tgtctaggtc ttagagatcc 1981 tgccggcaat cgtttaactt taacttatag ctcgggaaaa atgttacgca taacattacc 2041 cctcattaat gagacaaaat tggtatcacg ctgcattggt gcattgaagc aagtcctgaa 2101 aagggatcaa tttatacaca tgataacaaa atggtatggg gcacgtaatc cgcctgggtc 2161 cagtgactat tgtatcgagc aagaatggga tatatttcgc aatgtgttgt tagatctcat 2221 gggctattca gcgaccatgc atgatgttag cagtggcaca gctacttcat tttatgccga 2281 ggaaccaaaa aaacgaaaga aaaatgatga gattcattcg ggcaccgaag aggattggca 2341 gtttatgcta aatattctag atggtaatgt tggcatggaa aatgttggaa agtctcaaag 2401 tcagcaaatg tgtaataata ttgaaacctc ggcgatatta ttcaatacca taccggccat 2461 attctatagt tttcatttgc tctatgaaga ttttaaattg gatgaatcca tgcatcaaca 2521 tttaaggccc ttggcaaagt tccttcatca attggccttt gatatgcaat tgcagtccta 2581 tactttccat tactcgcttg attttccttt tctgattaag aatgcatcca aaacctgcat 2641 tctcacagaa caacatggtg ctcaaatgtt gcacaaagaa cttttgcagg ttgccgcacc 2701 aaatgttttc caacaaatgg agtttatact taaggataag gacaatatac cctataacta 2761 tgtggatggc ataaatgatt taagtcgtaa tgtgctgcag gtggtatccc tgataataca 2821 tggccatgag aaaattaaaa aatggattaa gcttttggaa tttcccgagt ctgtacagtc 2881 gcattttccc aagaaaccca aacgttttat ttcggtgaat gtttcgcgat cggagcaagt 2941 catacaaatg ttaataaaca tggaaatgac tcgcaaggat attgagcgtc taccggtagg 3001 catacatcta tgtattgcag aatgcctaga gtattcaaga cttgaaccac ccattggctg 3061 ttcgcccaca acatatgaat tgatattgcg ttccgattta gtggcccatg ctaaattaca 3121 aaatcataat tttacccaat cgcttaatca taactctgga tatctgcaaa aggtaaatat 3181 cgatacagaa gattccttgt cggcccgttg tccaccatcg aaaaatggaa tttctcaaat 3241 ggaagcagct ctcgatgacg gtatggacaa catcgatacg aaactattga gtctgcgatt 3301 tcccgatgat atgcgtgtgg ctgaggtaag aaggctgctg tcatcttcag aaccggttat 3361 catcgatata acacaatcac cgggcacttc agatcatgag tttatagagg aacaagagaa 3421 gcaattattt acgctatgca ccagaactat gactctgcct ttgggtagag gcatgtttac 3481 tttgcgaacc tcaataccca cacctaccga atctatgccc atacccaagc tgtgtttgac 3541 cggcaaagaa cccattaagg gtgccaccgt ggaaatgcag caaattgaat ttccccaaaa 3601 tatgagcctt tggcccacat ttcacaatgg ggtagcagct ggccttaaaa tttcacccaa 3661 tgcccgcgac gtagattcta catggatagt ttacaataag cccaagggtc aggcggatat 3721 ttccaccgag catgctggtt ttcttatggc tttgggccta aatggccatc ttaagacttt 3781 gtccttcatg agcatttatg agtatctggt gaaatgtgat gaaatgacta gtgtgggctt 3841 gctactggga ttttccgcca cacacagagg caccatgaat aatactacca caaaattgct 3901 aagtgtgcat atagaggcct tattgccggc cactgctttg gagctggata ttcctcagaa 3961 tatacaagta gctgctctaa tgggcattgg cctattgtat cagggaacgg ccaagcgtca 4021 catagctgag gttttgctgc aagaagttgg gcggcctccc ggaccagaaa tggaaaatag 4081 tatagaacgt gaatcatatg ccctgacagc tggtctggct ttgggtttag taacacttgg 4141 gcagggcgaa tctccggcag gccttagaga tttacaattg cctgacactt tacattatta 4201 tatggtggga ggcaataaac ggttgctgac tggttcacag aaagagaagt ataaactacc 4261 ttcattccaa gttcgcgaag gtgaacaggt taacattgat gtcactgcgc cgggagctac 4321 tctggcactg ggtttaatgt tcttcaatac agacaataaa gcagtagcgg aatggatgaa 4381 tcctcccaat accagatatt tattggattt agttagacca gatctattgc tactgcgcac 4441 cattgctcat ggcctgatta tgtggtccga aattaaagcc gacgaagagt ggctacacca 4501 gcagtttcca gcgaacttgc gttttgatgt cgagaagggt gctcaagtga atgacaatga 4561 ggatattgat catgaggcta taactcaagc ttactgcaac attattgctg gtgctgcctt 4621 ctgcataggc ttaaagtatg ctggctctga aaatcccaca gccttcaaga ctcttaggcg 4681 tgccattaaa ctattcctgg gatttcctgg aaaatatgtt ggagaatttg ctggacgcac 4741 aacaattgaa aatagcctta tggtcatatt gctggccatt tccttggtgt ttgctggttc 4801 tggtgatttg gaaattctac gtattatacg ttaccttaga tctcgcattg gctctcaaca 4861 tcctcatgtt acttatggct cacacatggc catacatatg tcattgggct ttttgttttt 4921 aggagctgga cgttttacca tttcgaaaac tcccgaggca gtggccgctt tagtgtgtgc 4981 actatttcca aagtttccca cgcacagtaa tgacaacaga tatcatcttc aagcttttcg 5041 ccatttatat gttttggctg tggaacctcg cctatttttg cctcgtgata ttgataccca 5101 aaagttgtgt ttgtgcaaca tttccgtatt agaggtgggc tctaaggaac tgagacgttt 5161 acccatggcc ccttgtatgt tgcctgaatt gagttctttg caaaaggttg tggtggatga 5221 tccaaactat tggccagttt catttgagaa ggaacgcaat tggaatcaat taatcaaagc 5281 cttggaaaac tccgcctgca ttgagataaa gaaacgctct ggctgcctat ctcacctaga 5341 ggatcctgat cgtctgaaga gtttattttc gcaaacattg accacagagc aatacatttg 5401 ctgggagatt gatccgaaga cattggagcg attttccaat gaaccttatg ttataggttt 5461 tacagatcgt tttctacact tagatgagcc tgaatcgtcc aataccgaat tggctttgaa 5521 gcagcatttg accatgctat tctacaatgc agtggtcaag gataaaatgc atgtgctgcc 5581 catatttatg gccacctata atcatatttt acgcctcacc acccaagagt ccaatttcaa 5641 tgatgtctgg caattgaaat tattaaattg ttatctcgat cagtattccc atccgcatat 5701 attattcccg aaggaactta tatcctctta tattgaacaa tttaaagttt ttatggagac 5761 ttgccggcaa aagctatcgg caccgctaag acaattttta agttcacatg atttcgaatc 5821 tcatgttata gcaaatctaa cacaacagga cttggcccat ttagtggctg tggtcattta 5881 ctatcagcta acaccaaatc tgttaaacag tttggtgcaa gcacctacaa attatgtggg 5941 ctacataaag gaattcagaa aactggattt ggaggcaaat accacacaat gtttgttaaa 6001 gattctacaa gccaccagtg cctgagatgt acaatgaatg actcacaccc agacagcaca 6061 acatttatga tataagaaaa caaacaatta caaatgaaga caaactcaaa agaaatataa 6121 tttattaaca agaaaacaaa atacatttag aaaaaggtat gtatgtacat atgtgcactt 6181 ggtatatata cagatttgca tttggtagag ttacatgcaa ggcatgacaa aacaattcaa 6241 cccttaatgg agtgtagatt tttacgatgt cctcatattt tcgtgttcct cctgtagtga 6301 gttgtcgccc tttatgacat ggcctgtaaa tttctgatac aaatataaag ctaataaagg 6361 aaacggtgtc ataatggcca ccgcaacagg tattacagta