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LOCUS XM_059366861 6571 bp mRNA linear INV 02-SEP-2023 (LOC106082921), transcript variant X2, mRNA. ACCESSION XM_059366861 VERSION XM_059366861.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6571 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6571 /gene="LOC106082921" /note="protein suppressor of sable; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106082921" CDS 1006..4944 /gene="LOC106082921" /codon_start=1 /product="protein suppressor of sable" /protein_id="XP_059222844.1" /db_xref="GeneID:106082921" /translation="MSQLETEMLPKPHDDEEVADAVDEEEMEDGEIDDSDEEAKPDDD VVIIIKDSPTGDIQKIPQNSSPNNVNINANKTKLDIIPSLNEPAANVVAALAQQPLAQ KSKKPQPTEDDYAINIEQAIANALKKKGIEPTMPKILEAKLQQQNEHSDESGPAAGQG QSKSSRRRKRKRQREEKEKEKEKERLEKRKRQEAVNDPLGPPPLGDEMDMDEFEMMNV RGGSPPPLPALPPPPPVHIYDDYDSRDESGSSYDSYDSNGEGSNGERRRRRKKESRRR KEKRAERHEKRSRRESLDEKHRNEPRKLELCKFYLMECCAKRDKCSYMHAEFPCKYYY LGMECTSKDDCKFSHGEPLSEELRNILLKHLETAPKEILGNFKRMSRENAINMITKRH EELCRKFNVQNVWSPINANSLPMSNNRRNNNNNNNNNNNSNKNNDHNQRQQQQQQQQQ QQNSNNSSIPSLLDLVVNPPQNLDANKNAANSNSETKRKSRWADSSGSPSAAAAAGAV IQPPSKSAPSYLDLKNLTGILSNEHIDKLSQMGIVNLEQVNQLTFGQLNQIGLTIAEI TEIQLNAMNMAKVTSSGALPPLKQNLIKNSVSGGNSSPKSQELGKTSNGDVDMRFLPE VTASTSSTAAMEGPDKDVTTSSNSNSSGVVMVDYSQYLKDSNLSFDKGDIYDDEKDDE QLVIDDGNLDTEEQAQKSSSLDLASQQLQTENNINTHQSYDNGFANKLQSTMSDIVKN FRNPFRSGGLYGSDAKLPEVRDTQRKTAARSPLNDDDPFYASSYTKRRYSRESRSRSR TPPGSQSNTPEASQSPEPFDRLRSDDVASSEKAKVVYERSTIYDFNNLSPEDEDRRAT RLKTDKDMRFLPGSLLGESSTGDTDLRLPFQPMTNYTPATEIDGSITSHLPITYKVYI VDVPQPSYMDLRQHFKSDQTTDPRLRRILGLPELSPSRTSSALSRKVRKASNTSIASP SETEDASPRYYTPPSAEDKTRSSSSRSDPRTDARGADPRTSERASDPRSQSDPRAASD PRSSASDPRRNDPRSTGSESSSNAANPAGGQKQNIEIRNLLQKSEWYKNLNSKFKIMV NQQLALVSTELKKFHQDPSPNKIFDISFIVNNQTLQQILTNLGIFIDDNGEVAHLESD GDESRETSPQRQDMTGNAKTNITLPNLSQPPPNAAAAAQINHNNNPPPALDFLRAPPP NMVPQGPPPIALGPMFQRPPIQVSPFARPSLLGLPPSQGNPMNPFNNPINPMNVNINP NFLAGGPPMMGPFGVGGGGPGPNFGGGMQMQRNFNNNNQRNNRNQNKRRI" polyA_site 6571 /gene="LOC106082921" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgaagagaac aaaaaatctt cactataatt ataatcctaa gtactgccta cataaggaga 61 ccactacttt atttatttta cacacataca tacgtacatc tcagagaacc atgcaagtca 121 atttggaata atttttcgaa atcaacgatg catttatgta cctatgtatg tttgcatatg 181 gagataaaga aaaaacgcaa ttacgtaata gtaattgcga aggaagggtt ttcggccagg 241 tcaagctttt attatttttc tctcgagcaa acgatgggga aaatttagca aaacttggtt 301 cctttctttt tttttccaca aatacagtac atttcgaaaa ttttctgtat gtatgtatgc 361 agcagtatat agtggtggta gggagcagag aatttgaaaa aggcgatgac acaaaggcaa 421 catatgaaga tgtgagaggg acagagacag acaaattatt cgtatgaata cgaatacaca 481 caaataccaa tgaagactgc gaaatagcaa tgagatacct accagccaag cgattacgag 541 gaaaacgttg aaattcaatt acgcgttgtt tgccagatta cgtttttaaa atgtaaaaga 601 tattggctat agctttagtc catgcaagca aatgttgaaa aataataagc gatgcttatg 661 aagtattcaa atactgcata aaataatagt caatagttgt ccgataattt caagtggacg 721 agagctaaga agcagctgct aaagaaaagt tggggctatt tctgttaagt gtgttttatg 781 tccccctaaa aaatatccga aataagcaag tgtttattta aaaaaattta taactgcagg 841 attcaatgtt ataaacaagt ggtaatgttg tgtaataaat aaacctgtat ttgacatcag 901 tcccatgcat aagccataac atactcgatg tccctttaaa aaaacaacaa caacaaacca 961 taagttgaaa caaacatcat tccaattgcc aaatagaaca caaaaatgtc acagctagaa 1021 acagaaatgt tgcccaaacc acatgatgat gaagaggttg cagatgctgt cgatgaagaa 1081 gaaatggaag atggtgaaat tgatgatagc gatgaagaag ctaaacccga tgatgatgta 1141 gttattatta ttaaagactc accgactggt gatattcaaa aaataccaca aaattcctcc 1201 cccaacaatg tcaacataaa tgctaacaaa actaaactag acataattcc ttcacttaat 1261 gagccagctg caaatgttgt ggccgcgctg gcgcaacaac cattggcaca gaaatctaaa 1321 aaaccccaac caacagaaga tgattatgcc attaacattg aacaggccat tgccaatgcc 1381 ctcaagaaga agggcattga gccaacaatg ccaaaaatct tagaagccaa acttcaacaa 1441 caaaatgaac acagtgatga atctggccct gctgcagggc agggacaaag taaaagtagt 1501 cgcaggcgca agcgtaaacg acagcgagag gaaaaggaaa aggagaaaga aaaggaacgt 1561 ttggagaagc gtaaacgcca ggaagccgtc aatgatcctt tgggtcctcc cccgcttggt 1621 gatgaaatgg acatggacga attcgaaatg atgaatgttc gtggtggtag tccacctcca 1681 ctgccagccc tacctcctcc gccaccggta cacatctatg acgattatga ttcacgcgat 1741 gaatccggct cttcctatga cagttacgat agcaatggcg aaggcagcaa tggagaacgc 1801 cgaagacgtc gtaagaagga atcgcgtaga cgcaaagaaa aacgtgctga aagacatgag 1861 aaacgttctc gccgtgaatc tttggatgag aagcatcgca atgagccccg caaactggaa 1921 ttgtgtaaat tctatcttat ggagtgctgt gccaagcggg ataaatgctc gtacatgcat 1981 gctgaattcc cttgtaaata ttattatctg ggcatggaat gcacctccaa agatgattgt 2041 aaattttccc atggcgagcc gttatccgaa gaattgcgta acattttgtt aaagcatttg 2101 gagacggctc ccaaggaaat attgggaaac ttcaagcgta tgtcacgtga gaatgccatt 2161 aatatgataa ctaagcggca tgaggagtta tgcagaaaat ttaatgttca aaatgtatgg 2221 tcacccataa atgccaatag cttgcccatg tccaataatc gccgtaacaa taacaacaat 2281 aataataaca ataacaacag taataaaaat aatgaccata atcaacggca acaacaacaa 2341 caacaacaac aacaacagca aaattccaat aattcctcaa ttccttcttt attggacttg 2401 gtggtgaatc ctccgcaaaa tttggatgcc aacaaaaatg cagcaaatag caacagcgaa 2461 actaaacgca aatctcgttg ggctgacagc agcggcagtc cttcggcagc agcagcagct 2521 ggagctgtta tacaaccacc atccaaatcg gccccaagct atttggattt gaaaaaccta 2581 accggtattt taagcaatga gcacatcgat aagctttcgc aaatgggcat tgtcaatttg 2641 gagcaggtta atcaattgac attcgggcag ctgaatcaaa ttggtttgac cattgctgaa 2701 atcactgaga ttcaattgaa tgccatgaat atggcaaaag tcacaagtag tggagcattg 2761 ccaccattaa agcaaaacct aatcaagaac tcagtgagtg gaggaaactc ttcgcctaag 2821 tctcaggaac ttggcaaaac ttctaatggg gatgtggata tgcgattcct gcctgaggtt 2881 acagccagca cttcctcaac tgctgctatg gagggccctg ataaggatgt taccacctca 2941 tcaaattcca acagcagtgg tgtggtcatg gttgactact ctcaatatct aaaagactct 3001 aatctctcct ttgataaagg agatatttat gatgacgaaa aagacgatga gcagctggtc 3061 atagacgatg gtaatctaga cactgaagaa caagcgcaaa aatcttccag ccttgatttg 3121 gcctcacagc aactacagac tgaaaataac atcaatactc atcaatcata tgataatggt 3181 tttgccaaca aactccaaag caccatgtcc gatatagtaa agaacttccg caaccccttt 3241 agatctgggg gtttatatgg ctccgatgcc aaattgcctg aagtgcgaga tactcagcgc 3301 aaaaccgccg cccgttcccc tctaaatgat gatgatccgt tttatgcttc cagctacact 3361 aagcgaagat attcgcgtga gagtagatct cgttcacgca ctcctcccgg ctcacaatcg 3421 aatacccctg aggcctcaca atcccctgaa ccctttgaca gactgagatc agatgatgtg 3481 gcatcaagcg aaaaggcaaa agttgtttat gaaagatcta ccatatatga ttttaacaac 3541 cttagcccag aggatgaaga tcgcagggcg actagactga aaaccgataa ggatatgcgt 3601 tttttgcctg gttcactgct gggcgagtcg tccaccggcg atacggacct gcgtttgccc 3661 tttcagccaa tgaccaacta tacaccggcc actgaaatcg atggttccat aacatcgcat 3721 ctgcccataa cctataaggt atacattgtg gatgtgcccc agcccagcta tatggatttg 3781 aggcaacatt ttaaatccga tcaaaccaca gatccaagac tgagaagaat attaggcttg 3841 ccagaattgt cgccttcccg cacatcatcg gcattaagcc gaaaagtaag aaaagccagc 3901 aataccagca tagcatcacc ctcggagacc gaagatgctt cacctcgtta ttatacacca 3961 ccctcggcgg aggataaaac aagaagttcc tcatcaagaa gtgatcccag aacagatgcg 4021 cgaggtgccg atccacggac atcggaaaga gccagtgatc ctaggtcgca aagcgatcca 4081 cgcgctgcat cggacccacg ctcttcagcg tcggatcccc ggcgaaatga tccacgttct 4141 actgggtcag agagcagctc gaatgccgcc aaccctgctg gaggtcaaaa gcaaaatatc 4201 gaaatacgca atttattgca aaagtccgag tggtacaaaa atcttaattc aaaattcaag 4261 ataatggtta accaacagct ggccttggtt tcgacagagc taaaaaaatt ccatcaagat 4321 ccatcgccca acaaaatttt cgacatatca tttattgtca ataatcagac attgcagcag 4381 atcttaacca acttgggcat ttttatagac gacaacggcg aagtggccca tctggaaagt 4441 gatggtgatg agagtcgaga gacctcaccc caacgtcagg atatgacagg taatgctaaa 4501 acgaatataa cattgccaaa tctgtcacag cccccgccca atgctgctgc tgctgcacaa 4561 ataaatcata ataacaaccc gccgcctgcc ttggatttcc taagagctcc accacccaat 4621 atggtgcctc agggtccccc acccatagcc ttgggaccca tgttccaaag gccccccata 4681 caggtgtcac catttgctcg ccccagcctc ttgggtctgc cccccagcca gggcaacccc 4741 atgaatccat ttaacaatcc cataaacccc atgaatgtga atataaatcc caattttctt 4801 gccggcggcc cgccaatgat gggacccttc ggtgtgggag gcgggggacc agggccaaac 4861 tttggcggcg gcatgcaaat gcagcgtaat ttcaataaca acaatcaacg caacaatcgc 4921 aatcaaaata aaaggagaat atagcatacg gcggatagag ctagtccgca tgaacatgaa 4981 accacaaagg ctggcaccgc tgcggccaag gccagtacga gcacgagtag tagcacctgc 5041 tcttcaggag ttccggaaga gagctcttct aagtgaaatt gttaacaatg atattcatac 5101 atatatacct acatacatac atacacatat tgtttgtaag attttaactt tgtttgccct 5161 ttttttcttc ttttctagat tatgtcttac taagttttct tcttttaata catatatgta 5221 gtagtatatg cttcatattt gaattaaagt tttactaagt aaaaacttaa aaatatttat 5281 aaattaaatt ataaaagaaa aacctatggt ttcttatttg aaaagctaaa aactatctct 5341 tagaaaggat aaaagttctt tttgggctgt tttagaagtg gtaggatctg taaatataag 5401 aaatcttctt agagagagaa cagaaatagt aaagatttgt tagtgcagtt tgtcttacta 5461 atgagttgca taggatttaa ataggtcaag gcctttagaa gattagaagt tacagtgccg 5521 ccaatgaata tgctacttta ttttgaaggt atgaactaat atttgattta gtaggattta 5581 aaacctatgg atgacacaca ccgagtcata tttggcatag acattttgca caattgtcca 5641 agaatagtat atgtcttaaa tgactctggg gcgacactgt gatttgggcc ttgggctctc 5701 cattgtgata atagactgaa tgtgtgagtt cagtaacatc tttacataga agttgggttt 5761 tttttattaa tcatcgattt acatgctaaa caaaaggttt taggcatatg tttgttaagt 5821 catttattta gttttttcct catagccaaa cacataaaaa aaccaattat gaccaagggt 5881 cgactgatgt gcataaatga aatgaatgac aaggttatgg attaaaaaaa aatcataatt 5941 tttcatatca agtactgata tatttctata acacaaaacc ttgtcaactt ttttatagtc 6001 ctatagtaaa aagaacagaa aatcattccg tattcctaac ctcactctcc ccaatgactt 6061 aaacgactga tgtggaaatg atgagaaaaa ttatgctatt tgttgcgccc atagccaact 6121 accattttcc atacttttga agagagctaa aaaagcacta tactcccaat taccgactga 6181 ctgagaaaag aaaatcttcc ctttccactg atgttttcca atttgatttt ttttcacccc 6241 ccctacctat ataaatgatt gtgtgtttta tatatcagac ttcaatctag ttgttaagtt 6301 agtttgtaat ttatctgtta agtaaagcta ttgtacatat agactatttg aaaaccagat 6361 atatataggc tgttttgttt taaaatccca cttctacttc acttaaagca taagacttat 6421 gtccaagtat cttaatctat tctttctgta taaaacaaac atacaacact ttgaaaatct 6481 tgcatgaaga gacatttttt tttagataat ctcatatgta attgtaacta cattgtgaaa 6541 atataaaaaa taaattatta aatagaattt a