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PREDICTED: Stomoxys calcitrans formin-J (LOC106090515), transcript


LOCUS       XM_059366829            4769 bp    mRNA    linear   INV 02-SEP-2023
            variant X10, mRNA.
ACCESSION   XM_059366829
VERSION     XM_059366829.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4769
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..4769
                     /gene="LOC106090515"
                     /note="formin-J; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:106090515"
     CDS             559..4674
                     /gene="LOC106090515"
                     /codon_start=1
                     /product="formin-J"
                     /protein_id="XP_059222812.1"
                     /db_xref="GeneID:106090515"
                     /translation="MSEPLSNDVSTESLCTVIETSSNEYLSNKFKDPIKSTSLESLDT
                     NRISPQNNLKQNGCHVLRGSLDESCDTDTTEKSLNNATTEEEGECEKKPKSKLKKSVS
                     FDPNDEKIRKFITGEPIVDQQNPFKSNGYLANGTIAGAGSAKRKDKKTPPPVPAKRST
                     LSVRKTVTQQLREREREKEKERERLKNEANNRKSNGSIIKSPSDEFVSTEDVLKQSKY
                     VKTYIKNPDPYFVYDPTVLARLKFEELRELALKKPPKRIVPQQQQPPQPQPRERLKDL
                     KNRQNENKPTKPSTLTFKKCSKPNYPELSDLKIKTGTDLEDSLYNPLEVTKNAKKFDE
                     RVKKLHISSDDDLDEIEEPLTKSESSDDNNMNAGNRQSDDKMPPNEENGSVSREPSPP
                     PPGTFTNTIKSKEFQEYLEKKGLTLIPKKIPNGAQPLYGNKPQQSTPLKQISFKAEPE
                     RIQFSSNGTDSVDTGGNNRKPSVFQRLLANSIFASRRKTTPKEPVPIIKPLYEASNEN
                     GSLKPIKRVVLERQSFHGRPKAGNLLSPAEALELKQQLERSRKSYASGDDVPLSISSS
                     LTNAENPDLNDSQNFANIKPAGTPGLRRKELQAKTIAKPPRRTLSRDRITKYEPPKMV
                     LSERPTNVNNNLYTLAREQPAKNDANFRRTLDRQSMIPKRTTQQADKQQVFGRSSSMD
                     RNEILKRNINRNQQQRSNSVTGEALLAPITTKSRENVQETTFPVNDGPPITSTPIRQS
                     HTVNGLSTKTISPISSIPKKASQLGVYVDQQEWEKLRAIKEQTDKELYHRVMQQQQKL
                     QQQQQQQQQQQKSQQEEQKTPTSPPHASQQQQQSSNSEQKLENIYEHLPGGSQVRLAP
                     GESSTFTRGSPQRNTFSGIIRSNNRQVKIIDGKPVVAPETMQSSSKLINGPVPRSQSV
                     LDNVTRRGGYESETPETPVVLRRKAEGDNSQQQQQQPTRRIGGLLTREEILQKIKEFC
                     RKSINKTPTNQAPVPLQAIYEKQPTGTDLSPVSYVSVETHQRPASRMYAAPQVPQRMH
                     SLPAAATATGHFVPIAQEIVTDPNTNSPIYAHVVKRGSLQSNQSELYEIPQRTLVAAP
                     PPTQYFIRREAAPTELKPVYIRQGTLQRPESAFSPAPTQYILVDGEKLQPAQLIAAYP
                     QTELYAQPQYIRPHQLQSMPGASYGYITVREPLIHQGQPQHPQMIRPRLHDGRSTPLI
                     LDRSSQQVSQIYWTPQHQRLQQQAGLLTDQISPRYALKQSYVMPGPQQQQLLQNRATP
                     LILQHPQLSPHIQNIPAQRQYSPSPLIREPTPTQTMHQIQQTKPQQPQIQELTLANAR
                     QSPAFDWESGSEAGEVQRIMEKQQQHDQKTDLNYLHLDLPKAHQLQITQNG"
ORIGIN      
        1 acgagaactt gaaccggttg gttgtcatta gagttgaacg aatcaagaaa aacgccgaca
       61 atttgttttt ttaaagaata attttagtaa agcgcaaaat ttaaaaaaga aaaaaccatc
      121 gaaaaaatta acttaaatga ttagttggca attttttttt gctgttttat tgtttttcta
      181 aaattcgtat tattaaaaaa tatattcgaa aataaaacgt gtcatgaaat tttgctttgt
      241 taaaaaaaaa caaaaagtgg tggttaactg gaataatttg aaagccacga attttatgct
      301 ctccggtatt tttggggttg tttaactaac caaatcgaca aaacaacaac agtgtgtttt
      361 acctaattgt tctgaaactt aagtttctct gtcatataaa actactgaca atcaaaggat
      421 tattccagaa tattcaatgc aagccaatat cgctgcccgc taccgcaatt tttcttcgat
      481 tctcccttct caaacccaac tatcgcccct caactgcaac tttagatctg tagccagcaa
      541 cagcagccgc cggacgacat gtcagaacca cttagtaatg atgttagcac cgaatcctta
      601 tgtacagtca tagaaaccag tagcaacgaa tatctatcga ataaatttaa agatcccata
      661 aaaagcacct cactagaatc gctcgacaca aatcgcatat cgccgcagaa taatctcaaa
      721 caaaatggtt gtcacgtcct acgtggttct ctagacgaaa gctgtgatac agatacaaca
      781 gaaaagtccc ttaacaacgc cacaaccgaa gaggagggcg aatgtgaaaa gaagcccaaa
      841 tcaaaattga aaaaatccgt ctcgttcgat ccgaatgatg aaaagatacg aaaattcata
      901 acaggcgaac ccatagtaga tcaacagaat cccttcaaga gtaatggtta tttagcaaac
      961 ggcaccatcg ccggagcagg aagtgccaag agaaaggaca agaaaacgcc accaccggtg
     1021 ccggccaaac gctcaacgct cagtgtgcga aaaaccgtta cccaacagtt gagggaacgt
     1081 gaaagggaaa aggagaagga aagggagcgc ctcaagaacg aggcgaataa tcgcaaaagc
     1141 aatggcagca ttattaaatc accgtccgat gagtttgtct ccacagaaga tgtgctaaag
     1201 cagtcaaaat acgtaaagac ctacatcaag aatccagatc cctattttgt ctatgatcca
     1261 acagtattag ctcgtttgaa attcgaagag ctacgagaac tagctttaaa aaagccacca
     1321 aagaggatag taccacagca acagcagcca ccgcagcccc agccaaggga acgtctgaag
     1381 gatttgaaaa atcgccaaaa cgaaaataag cccacaaagc cgtcaacgct gacattcaaa
     1441 aaatgttcca agcccaacta tccagaacta tcggatttga aaattaaaac cggcacagat
     1501 ttggaggata gcctttacaa ccccttggaa gttaccaaga atgccaagaa attcgatgag
     1561 agagttaaaa aattgcatat atcctccgat gatgacctgg acgaaattga agagccttta
     1621 actaaaagtg agtcaagtga tgataataac atgaatgctg gaaatcgcca atcagacgac
     1681 aaaatgcccc caaatgaaga aaatggtagt gtgagtaggg aaccttcacc cccgcctccc
     1741 ggaacattta ccaacaccat caaatcgaaa gaatttcaag aatatttgga gaaaaaggga
     1801 ctcaccttga tacccaagaa aatacccaac ggcgcccaac cgctgtatgg caacaagccg
     1861 cagcaatcca cacccctaaa acaaattagc tttaaagccg aacccgagcg catacaattt
     1921 tcctccaatg gcaccgattc ggtggacact ggcggaaata atcgcaaacc ttcagtattt
     1981 cagagactat tggccaatag tatatttgct tcgcgtcgaa aaacgacacc caaagaaccg
     2041 gttcctataa tcaagcctct ttatgaagca agcaatgaga atggttcctt aaagcccatt
     2101 aaacgtgttg tactggagcg tcagagtttc catggaagac ccaaggcggg aaatttgctg
     2161 agtccagccg aagccctgga actaaagcag caattggaga ggtcccgcaa aagttacgcc
     2221 agtggtgacg atgtgccgct atcgatctca agttctttga ccaatgccga aaatcccgac
     2281 ttaaatgatt cacagaattt tgcaaatatt aaaccagccg gaacacctgg cttaagaagg
     2341 aaagagttgc aagcaaaaac tatagccaag ccaccacggc gtaccttatc aagagatcgc
     2401 ataactaagt acgaaccacc aaagatggtg cttagcgagc gtcccacaaa tgtcaacaac
     2461 aatttgtaca ctttggcccg cgaacagcct gcaaagaatg atgcgaattt taggcgaacc
     2521 ctggatcggc aaagcatgat accgaaacga accacccaac aagcggataa acagcaagtt
     2581 ttcggcagat cctcgtccat ggatcgaaat gagattttga agagaaatat taaccgcaac
     2641 cagcaacaaa gatcaaatag tgtgacggga gaagccctgt tggctcccat caccaccaaa
     2701 tctcgagaga atgtacaaga aaccacattt ccggtaaatg atggcccgcc tataacatcc
     2761 acacccatta ggcagtctca tacggtcaat ggtctcagca caaaaacaat ttctcccata
     2821 tcctccattc ccaagaaggc gtcacagctg ggagtttatg tggaccagca ggagtgggaa
     2881 aaactgagag ctataaagga gcaaactgac aaagaactat accatagggt tatgcagcaa
     2941 caacagaaac tgcaacagca acaacaacaa caacaacagc agcaaaagtc ccaacaagaa
     3001 gagcaaaaaa cccccacgtc tcctccacat gcttctcaac aacaacagca aagttctaat
     3061 tcagaacaga aactggaaaa tatttatgaa catttgccag gaggcagcca agtgcgcttg
     3121 gctccaggcg aatccagcac cttcactaga ggctcaccac aacgcaatac cttttccggc
     3181 attatacgtt ccaataatcg gcaagtaaaa ataatcgatg gcaaaccagt ggtggcccca
     3241 gaaaccatgc aatcgtcttc taagcttatc aatggtcccg taccacgctc tcaaagtgtt
     3301 ttggataatg tgacacgccg aggaggctat gaaagtgaaa ctccggagac cccggtggtt
     3361 ttacgtcgca aagctgaggg agacaattcg caacagcagc aacaacaacc tacccgacgt
     3421 attggaggtc ttctgacacg cgaagaaatt ttgcagaaaa ttaaagaatt ctgccgcaag
     3481 tcgatcaata agactccaac caatcaagcc cccgtcccat tgcaagccat ttacgagaag
     3541 cagccaactg gaacagatct ctcgcccgtc tcgtacgttt cggtggagac ccatcaaagg
     3601 cctgcatcac gtatgtatgc agctcctcaa gtaccacagc gcatgcacag cctaccggca
     3661 gccgcaactg ctacaggtca ctttgtgccc atagcccaag aaatagttac cgatcccaat
     3721 acgaactcac caatttatgc ccatgtcgtt aagagaggca gtctgcaatc gaatcaatcg
     3781 gaattatatg aaattcccca aaggactttg gtggccgctc cgccacctac ccaatatttc
     3841 atacgaagag aggcggctcc aacagaattg aaacctgtct acatacgcca aggtacattg
     3901 caacgacccg aaagtgcctt ttcgccagcc ccaacccagt acatactggt ggatggagaa
     3961 aaactacaac ctgcacaact tatagcagcc tacccacaaa ctgagctgta tgcccaacca
     4021 caatacattc ggccacatca gctccagtcg atgccgggag ctagttatgg ttatattaca
     4081 gtaagagagc cccttatcca tcaaggccag ccccaacatc cacagatgat acgaccccgt
     4141 ttgcacgacg gccgtagtac tccattgata cttgatcgct caagtcaaca agtgagtcaa
     4201 atctattgga ccccacagca ccagagacta caacagcagg cgggactatt aaccgatcag
     4261 attagtccac gttacgcact taagcagtct tatgtgatgc ctggtccaca acagcagcag
     4321 ctattacaaa atcgtgctac accccttata ctacagcatc cgcaactttc gccccacata
     4381 caaaacattc cagcacaacg ccaatattct ccttcgcctc tcattaggga accaactccc
     4441 actcaaacga tgcaccagat acaacagacg aaaccacaac agccacaaat tcaggagtta
     4501 accttggcca atgctcgaca aagtccagca ttcgattggg aaagtggctc tgaggccggt
     4561 gaggttcagc gaattatgga gaagcaacaa cagcacgacc aaaaaaccga tctaaattat
     4621 ttacatttgg atttgcctaa agcccatcag ttgcagataa cacaaaatgg ataaatcttt
     4681 aaagaaggag ctggagaata gtaaagaacc ctcaaaagaa ccaaaagcaa ccatccacag
     4741 caccactagc agcacaccca ccactacca