Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans formin-J (LOC106090515), transcript


LOCUS       XM_059366827            5180 bp    mRNA    linear   INV 02-SEP-2023
            variant X8, mRNA.
ACCESSION   XM_059366827
VERSION     XM_059366827.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5180
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..5180
                     /gene="LOC106090515"
                     /note="formin-J; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:106090515"
     CDS             970..5085
                     /gene="LOC106090515"
                     /codon_start=1
                     /product="formin-J"
                     /protein_id="XP_059222810.1"
                     /db_xref="GeneID:106090515"
                     /translation="MSEPLSNDVSTESLCTVIETSSNEYLSNKFKDPIKSTSLESLDT
                     NRISPQNNLKQNGCHVLRGSLDESCDTDTTEKSLNNATTEEEGECEKKPKSKLKKSVS
                     FDPNDEKIRKFITGEPIVDQQNPFKSNGYLANGTIAGAGSAKRKDKKTPPPVPAKRST
                     LSVRKTVTQQLREREREKEKERERLKNEANNRKSNGSIIKSPSDEFVSTEDVLKQSKY
                     VKTYIKNPDPYFVYDPTVLARLKFEELRELALKKPPKRIVPQQQQPPQPQPRERLKDL
                     KNRQNENKPTKPSTLTFKKCSKPNYPELSDLKIKTGTDLEDSLYNPLEVTKNAKKFDE
                     RVKKLHISSDDDLDEIEEPLTKSESSDDNNMNAGNRQSDDKMPPNEENGSVSREPSPP
                     PPGTFTNTIKSKEFQEYLEKKGLTLIPKKIPNGAQPLYGNKPQQSTPLKQISFKAEPE
                     RIQFSSNGTDSVDTGGNNRKPSVFQRLLANSIFASRRKTTPKEPVPIIKPLYEASNEN
                     GSLKPIKRVVLERQSFHGRPKAGNLLSPAEALELKQQLERSRKSYASGDDVPLSISSS
                     LTNAENPDLNDSQNFANIKPAGTPGLRRKELQAKTIAKPPRRTLSRDRITKYEPPKMV
                     LSERPTNVNNNLYTLAREQPAKNDANFRRTLDRQSMIPKRTTQQADKQQVFGRSSSMD
                     RNEILKRNINRNQQQRSNSVTGEALLAPITTKSRENVQETTFPVNDGPPITSTPIRQS
                     HTVNGLSTKTISPISSIPKKASQLGVYVDQQEWEKLRAIKEQTDKELYHRVMQQQQKL
                     QQQQQQQQQQQKSQQEEQKTPTSPPHASQQQQQSSNSEQKLENIYEHLPGGSQVRLAP
                     GESSTFTRGSPQRNTFSGIIRSNNRQVKIIDGKPVVAPETMQSSSKLINGPVPRSQSV
                     LDNVTRRGGYESETPETPVVLRRKAEGDNSQQQQQQPTRRIGGLLTREEILQKIKEFC
                     RKSINKTPTNQAPVPLQAIYEKQPTGTDLSPVSYVSVETHQRPASRMYAAPQVPQRMH
                     SLPAAATATGHFVPIAQEIVTDPNTNSPIYAHVVKRGSLQSNQSELYEIPQRTLVAAP
                     PPTQYFIRREAAPTELKPVYIRQGTLQRPESAFSPAPTQYILVDGEKLQPAQLIAAYP
                     QTELYAQPQYIRPHQLQSMPGASYGYITVREPLIHQGQPQHPQMIRPRLHDGRSTPLI
                     LDRSSQQVSQIYWTPQHQRLQQQAGLLTDQISPRYALKQSYVMPGPQQQQLLQNRATP
                     LILQHPQLSPHIQNIPAQRQYSPSPLIREPTPTQTMHQIQQTKPQQPQIQELTLANAR
                     QSPAFDWESGSEAGEVQRIMEKQQQHDQKTDLNYLHLDLPKAHQLQITQNG"
ORIGIN      
        1 cttattaatt aacgtgcaag taataaagtg tgaaaaaatt aacaaaatct tcaaaattta
       61 taacctaaca aaaataaaaa taaaccagtg ctcatttaaa accatcacga tttttgccat
      121 ataaaacaaa agaaatagcg agtcaaacgt tttcgcgata aacatctttg aaaaacgtta
      181 ttgtttatgt atacggaagc gcaaattaga gtcatcgcac agaggtagac ccaaaaaacg
      241 tccacacaaa accgaaaaga gaaaaaacgc atcgtttggt ttgcggttgt aatgctgaca
      301 aaaacagaaa actaagaaga aaagaaaaaa aaaaacagaa ataaaaacaa aaatcaacct
      361 cagctctcaa tttgaaaccg gtttaacttt ttgttgtcat cgtgatcttt gtgttgagta
      421 agcgatattt tgtttggttg gtgtgggaaa ttttggtttt cagctccaat actccccagt
      481 cgcgacgagt tgtgaagaat catggggagg ggaagtgcag tgattcttat ttgaagtttt
      541 tcgtttgctg gaatccctct ctcattgtga ggcttactaa acaatgtttt atggcaaatg
      601 catctatctg tgtaacaata acaacgtgag gattgaaaat caaaacaaag caaataaacg
      661 aggagtgaag cataggagag agtaaagaaa caatgaacca aaagtatcgt caacaacagc
      721 tatagtacca gcatctgcaa caatgaagcg tttaaatgaa cacagttgca ttatggcaac
      781 tccagttaag aaagtttctc tgtcatataa aactactgac aatcaaagga ttattccaga
      841 atattcaatg caagccaata tcgctgcccg ctaccgcaat ttttcttcga ttctcccttc
      901 tcaaacccaa ctatcgcccc tcaactgcaa ctttagatct gtagccagca acagcagccg
      961 ccggacgaca tgtcagaacc acttagtaat gatgttagca ccgaatcctt atgtacagtc
     1021 atagaaacca gtagcaacga atatctatcg aataaattta aagatcccat aaaaagcacc
     1081 tcactagaat cgctcgacac aaatcgcata tcgccgcaga ataatctcaa acaaaatggt
     1141 tgtcacgtcc tacgtggttc tctagacgaa agctgtgata cagatacaac agaaaagtcc
     1201 cttaacaacg ccacaaccga agaggagggc gaatgtgaaa agaagcccaa atcaaaattg
     1261 aaaaaatccg tctcgttcga tccgaatgat gaaaagatac gaaaattcat aacaggcgaa
     1321 cccatagtag atcaacagaa tcccttcaag agtaatggtt atttagcaaa cggcaccatc
     1381 gccggagcag gaagtgccaa gagaaaggac aagaaaacgc caccaccggt gccggccaaa
     1441 cgctcaacgc tcagtgtgcg aaaaaccgtt acccaacagt tgagggaacg tgaaagggaa
     1501 aaggagaagg aaagggagcg cctcaagaac gaggcgaata atcgcaaaag caatggcagc
     1561 attattaaat caccgtccga tgagtttgtc tccacagaag atgtgctaaa gcagtcaaaa
     1621 tacgtaaaga cctacatcaa gaatccagat ccctattttg tctatgatcc aacagtatta
     1681 gctcgtttga aattcgaaga gctacgagaa ctagctttaa aaaagccacc aaagaggata
     1741 gtaccacagc aacagcagcc accgcagccc cagccaaggg aacgtctgaa ggatttgaaa
     1801 aatcgccaaa acgaaaataa gcccacaaag ccgtcaacgc tgacattcaa aaaatgttcc
     1861 aagcccaact atccagaact atcggatttg aaaattaaaa ccggcacaga tttggaggat
     1921 agcctttaca accccttgga agttaccaag aatgccaaga aattcgatga gagagttaaa
     1981 aaattgcata tatcctccga tgatgacctg gacgaaattg aagagccttt aactaaaagt
     2041 gagtcaagtg atgataataa catgaatgct ggaaatcgcc aatcagacga caaaatgccc
     2101 ccaaatgaag aaaatggtag tgtgagtagg gaaccttcac ccccgcctcc cggaacattt
     2161 accaacacca tcaaatcgaa agaatttcaa gaatatttgg agaaaaaggg actcaccttg
     2221 atacccaaga aaatacccaa cggcgcccaa ccgctgtatg gcaacaagcc gcagcaatcc
     2281 acacccctaa aacaaattag ctttaaagcc gaacccgagc gcatacaatt ttcctccaat
     2341 ggcaccgatt cggtggacac tggcggaaat aatcgcaaac cttcagtatt tcagagacta
     2401 ttggccaata gtatatttgc ttcgcgtcga aaaacgacac ccaaagaacc ggttcctata
     2461 atcaagcctc tttatgaagc aagcaatgag aatggttcct taaagcccat taaacgtgtt
     2521 gtactggagc gtcagagttt ccatggaaga cccaaggcgg gaaatttgct gagtccagcc
     2581 gaagccctgg aactaaagca gcaattggag aggtcccgca aaagttacgc cagtggtgac
     2641 gatgtgccgc tatcgatctc aagttctttg accaatgccg aaaatcccga cttaaatgat
     2701 tcacagaatt ttgcaaatat taaaccagcc ggaacacctg gcttaagaag gaaagagttg
     2761 caagcaaaaa ctatagccaa gccaccacgg cgtaccttat caagagatcg cataactaag
     2821 tacgaaccac caaagatggt gcttagcgag cgtcccacaa atgtcaacaa caatttgtac
     2881 actttggccc gcgaacagcc tgcaaagaat gatgcgaatt ttaggcgaac cctggatcgg
     2941 caaagcatga taccgaaacg aaccacccaa caagcggata aacagcaagt tttcggcaga
     3001 tcctcgtcca tggatcgaaa tgagattttg aagagaaata ttaaccgcaa ccagcaacaa
     3061 agatcaaata gtgtgacggg agaagccctg ttggctccca tcaccaccaa atctcgagag
     3121 aatgtacaag aaaccacatt tccggtaaat gatggcccgc ctataacatc cacacccatt
     3181 aggcagtctc atacggtcaa tggtctcagc acaaaaacaa tttctcccat atcctccatt
     3241 cccaagaagg cgtcacagct gggagtttat gtggaccagc aggagtggga aaaactgaga
     3301 gctataaagg agcaaactga caaagaacta taccataggg ttatgcagca acaacagaaa
     3361 ctgcaacagc aacaacaaca acaacaacag cagcaaaagt cccaacaaga agagcaaaaa
     3421 acccccacgt ctcctccaca tgcttctcaa caacaacagc aaagttctaa ttcagaacag
     3481 aaactggaaa atatttatga acatttgcca ggaggcagcc aagtgcgctt ggctccaggc
     3541 gaatccagca ccttcactag aggctcacca caacgcaata ccttttccgg cattatacgt
     3601 tccaataatc ggcaagtaaa aataatcgat ggcaaaccag tggtggcccc agaaaccatg
     3661 caatcgtctt ctaagcttat caatggtccc gtaccacgct ctcaaagtgt tttggataat
     3721 gtgacacgcc gaggaggcta tgaaagtgaa actccggaga ccccggtggt tttacgtcgc
     3781 aaagctgagg gagacaattc gcaacagcag caacaacaac ctacccgacg tattggaggt
     3841 cttctgacac gcgaagaaat tttgcagaaa attaaagaat tctgccgcaa gtcgatcaat
     3901 aagactccaa ccaatcaagc ccccgtccca ttgcaagcca tttacgagaa gcagccaact
     3961 ggaacagatc tctcgcccgt ctcgtacgtt tcggtggaga cccatcaaag gcctgcatca
     4021 cgtatgtatg cagctcctca agtaccacag cgcatgcaca gcctaccggc agccgcaact
     4081 gctacaggtc actttgtgcc catagcccaa gaaatagtta ccgatcccaa tacgaactca
     4141 ccaatttatg cccatgtcgt taagagaggc agtctgcaat cgaatcaatc ggaattatat
     4201 gaaattcccc aaaggacttt ggtggccgct ccgccaccta cccaatattt catacgaaga
     4261 gaggcggctc caacagaatt gaaacctgtc tacatacgcc aaggtacatt gcaacgaccc
     4321 gaaagtgcct tttcgccagc cccaacccag tacatactgg tggatggaga aaaactacaa
     4381 cctgcacaac ttatagcagc ctacccacaa actgagctgt atgcccaacc acaatacatt
     4441 cggccacatc agctccagtc gatgccggga gctagttatg gttatattac agtaagagag
     4501 ccccttatcc atcaaggcca gccccaacat ccacagatga tacgaccccg tttgcacgac
     4561 ggccgtagta ctccattgat acttgatcgc tcaagtcaac aagtgagtca aatctattgg
     4621 accccacagc accagagact acaacagcag gcgggactat taaccgatca gattagtcca
     4681 cgttacgcac ttaagcagtc ttatgtgatg cctggtccac aacagcagca gctattacaa
     4741 aatcgtgcta caccccttat actacagcat ccgcaacttt cgccccacat acaaaacatt
     4801 ccagcacaac gccaatattc tccttcgcct ctcattaggg aaccaactcc cactcaaacg
     4861 atgcaccaga tacaacagac gaaaccacaa cagccacaaa ttcaggagtt aaccttggcc
     4921 aatgctcgac aaagtccagc attcgattgg gaaagtggct ctgaggccgg tgaggttcag
     4981 cgaattatgg agaagcaaca acagcacgac caaaaaaccg atctaaatta tttacatttg
     5041 gatttgccta aagcccatca gttgcagata acacaaaatg gataaatctt taaagaagga
     5101 gctggagaat agtaaagaac cctcaaaaga accaaaagca accatccaca gcaccactag
     5161 cagcacaccc accactacca