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PREDICTED: Stomoxys calcitrans formin-J (LOC106090515), transcript


LOCUS       XM_059366823            4490 bp    mRNA    linear   INV 02-SEP-2023
            variant X5, mRNA.
ACCESSION   XM_059366823
VERSION     XM_059366823.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4490
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..4490
                     /gene="LOC106090515"
                     /note="formin-J; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:106090515"
     CDS             280..4395
                     /gene="LOC106090515"
                     /codon_start=1
                     /product="formin-J"
                     /protein_id="XP_059222806.1"
                     /db_xref="GeneID:106090515"
                     /translation="MSEPLSNDVSTESLCTVIETSSNEYLSNKFKDPIKSTSLESLDT
                     NRISPQNNLKQNGCHVLRGSLDESCDTDTTEKSLNNATTEEEGECEKKPKSKLKKSVS
                     FDPNDEKIRKFITGEPIVDQQNPFKSNGYLANGTIAGAGSAKRKDKKTPPPVPAKRST
                     LSVRKTVTQQLREREREKEKERERLKNEANNRKSNGSIIKSPSDEFVSTEDVLKQSKY
                     VKTYIKNPDPYFVYDPTVLARLKFEELRELALKKPPKRIVPQQQQPPQPQPRERLKDL
                     KNRQNENKPTKPSTLTFKKCSKPNYPELSDLKIKTGTDLEDSLYNPLEVTKNAKKFDE
                     RVKKLHISSDDDLDEIEEPLTKSESSDDNNMNAGNRQSDDKMPPNEENGSVSREPSPP
                     PPGTFTNTIKSKEFQEYLEKKGLTLIPKKIPNGAQPLYGNKPQQSTPLKQISFKAEPE
                     RIQFSSNGTDSVDTGGNNRKPSVFQRLLANSIFASRRKTTPKEPVPIIKPLYEASNEN
                     GSLKPIKRVVLERQSFHGRPKAGNLLSPAEALELKQQLERSRKSYASGDDVPLSISSS
                     LTNAENPDLNDSQNFANIKPAGTPGLRRKELQAKTIAKPPRRTLSRDRITKYEPPKMV
                     LSERPTNVNNNLYTLAREQPAKNDANFRRTLDRQSMIPKRTTQQADKQQVFGRSSSMD
                     RNEILKRNINRNQQQRSNSVTGEALLAPITTKSRENVQETTFPVNDGPPITSTPIRQS
                     HTVNGLSTKTISPISSIPKKASQLGVYVDQQEWEKLRAIKEQTDKELYHRVMQQQQKL
                     QQQQQQQQQQQKSQQEEQKTPTSPPHASQQQQQSSNSEQKLENIYEHLPGGSQVRLAP
                     GESSTFTRGSPQRNTFSGIIRSNNRQVKIIDGKPVVAPETMQSSSKLINGPVPRSQSV
                     LDNVTRRGGYESETPETPVVLRRKAEGDNSQQQQQQPTRRIGGLLTREEILQKIKEFC
                     RKSINKTPTNQAPVPLQAIYEKQPTGTDLSPVSYVSVETHQRPASRMYAAPQVPQRMH
                     SLPAAATATGHFVPIAQEIVTDPNTNSPIYAHVVKRGSLQSNQSELYEIPQRTLVAAP
                     PPTQYFIRREAAPTELKPVYIRQGTLQRPESAFSPAPTQYILVDGEKLQPAQLIAAYP
                     QTELYAQPQYIRPHQLQSMPGASYGYITVREPLIHQGQPQHPQMIRPRLHDGRSTPLI
                     LDRSSQQVSQIYWTPQHQRLQQQAGLLTDQISPRYALKQSYVMPGPQQQQLLQNRATP
                     LILQHPQLSPHIQNIPAQRQYSPSPLIREPTPTQTMHQIQQTKPQQPQIQELTLANAR
                     QSPAFDWESGSEAGEVQRIMEKQQQHDQKTDLNYLHLDLPKAHQLQITQNG"
ORIGIN      
        1 gtaattgtca ctttgccaaa ctttatgggt tttgaatgaa tggtacccat tggactttag
       61 caaaattcag tagcgtaaaa taatcgccat tgttactcat aaagtttctc tgtcatataa
      121 aactactgac aatcaaagga ttattccaga atattcaatg caagccaata tcgctgcccg
      181 ctaccgcaat ttttcttcga ttctcccttc tcaaacccaa ctatcgcccc tcaactgcaa
      241 ctttagatct gtagccagca acagcagccg ccggacgaca tgtcagaacc acttagtaat
      301 gatgttagca ccgaatcctt atgtacagtc atagaaacca gtagcaacga atatctatcg
      361 aataaattta aagatcccat aaaaagcacc tcactagaat cgctcgacac aaatcgcata
      421 tcgccgcaga ataatctcaa acaaaatggt tgtcacgtcc tacgtggttc tctagacgaa
      481 agctgtgata cagatacaac agaaaagtcc cttaacaacg ccacaaccga agaggagggc
      541 gaatgtgaaa agaagcccaa atcaaaattg aaaaaatccg tctcgttcga tccgaatgat
      601 gaaaagatac gaaaattcat aacaggcgaa cccatagtag atcaacagaa tcccttcaag
      661 agtaatggtt atttagcaaa cggcaccatc gccggagcag gaagtgccaa gagaaaggac
      721 aagaaaacgc caccaccggt gccggccaaa cgctcaacgc tcagtgtgcg aaaaaccgtt
      781 acccaacagt tgagggaacg tgaaagggaa aaggagaagg aaagggagcg cctcaagaac
      841 gaggcgaata atcgcaaaag caatggcagc attattaaat caccgtccga tgagtttgtc
      901 tccacagaag atgtgctaaa gcagtcaaaa tacgtaaaga cctacatcaa gaatccagat
      961 ccctattttg tctatgatcc aacagtatta gctcgtttga aattcgaaga gctacgagaa
     1021 ctagctttaa aaaagccacc aaagaggata gtaccacagc aacagcagcc accgcagccc
     1081 cagccaaggg aacgtctgaa ggatttgaaa aatcgccaaa acgaaaataa gcccacaaag
     1141 ccgtcaacgc tgacattcaa aaaatgttcc aagcccaact atccagaact atcggatttg
     1201 aaaattaaaa ccggcacaga tttggaggat agcctttaca accccttgga agttaccaag
     1261 aatgccaaga aattcgatga gagagttaaa aaattgcata tatcctccga tgatgacctg
     1321 gacgaaattg aagagccttt aactaaaagt gagtcaagtg atgataataa catgaatgct
     1381 ggaaatcgcc aatcagacga caaaatgccc ccaaatgaag aaaatggtag tgtgagtagg
     1441 gaaccttcac ccccgcctcc cggaacattt accaacacca tcaaatcgaa agaatttcaa
     1501 gaatatttgg agaaaaaggg actcaccttg atacccaaga aaatacccaa cggcgcccaa
     1561 ccgctgtatg gcaacaagcc gcagcaatcc acacccctaa aacaaattag ctttaaagcc
     1621 gaacccgagc gcatacaatt ttcctccaat ggcaccgatt cggtggacac tggcggaaat
     1681 aatcgcaaac cttcagtatt tcagagacta ttggccaata gtatatttgc ttcgcgtcga
     1741 aaaacgacac ccaaagaacc ggttcctata atcaagcctc tttatgaagc aagcaatgag
     1801 aatggttcct taaagcccat taaacgtgtt gtactggagc gtcagagttt ccatggaaga
     1861 cccaaggcgg gaaatttgct gagtccagcc gaagccctgg aactaaagca gcaattggag
     1921 aggtcccgca aaagttacgc cagtggtgac gatgtgccgc tatcgatctc aagttctttg
     1981 accaatgccg aaaatcccga cttaaatgat tcacagaatt ttgcaaatat taaaccagcc
     2041 ggaacacctg gcttaagaag gaaagagttg caagcaaaaa ctatagccaa gccaccacgg
     2101 cgtaccttat caagagatcg cataactaag tacgaaccac caaagatggt gcttagcgag
     2161 cgtcccacaa atgtcaacaa caatttgtac actttggccc gcgaacagcc tgcaaagaat
     2221 gatgcgaatt ttaggcgaac cctggatcgg caaagcatga taccgaaacg aaccacccaa
     2281 caagcggata aacagcaagt tttcggcaga tcctcgtcca tggatcgaaa tgagattttg
     2341 aagagaaata ttaaccgcaa ccagcaacaa agatcaaata gtgtgacggg agaagccctg
     2401 ttggctccca tcaccaccaa atctcgagag aatgtacaag aaaccacatt tccggtaaat
     2461 gatggcccgc ctataacatc cacacccatt aggcagtctc atacggtcaa tggtctcagc
     2521 acaaaaacaa tttctcccat atcctccatt cccaagaagg cgtcacagct gggagtttat
     2581 gtggaccagc aggagtggga aaaactgaga gctataaagg agcaaactga caaagaacta
     2641 taccataggg ttatgcagca acaacagaaa ctgcaacagc aacaacaaca acaacaacag
     2701 cagcaaaagt cccaacaaga agagcaaaaa acccccacgt ctcctccaca tgcttctcaa
     2761 caacaacagc aaagttctaa ttcagaacag aaactggaaa atatttatga acatttgcca
     2821 ggaggcagcc aagtgcgctt ggctccaggc gaatccagca ccttcactag aggctcacca
     2881 caacgcaata ccttttccgg cattatacgt tccaataatc ggcaagtaaa aataatcgat
     2941 ggcaaaccag tggtggcccc agaaaccatg caatcgtctt ctaagcttat caatggtccc
     3001 gtaccacgct ctcaaagtgt tttggataat gtgacacgcc gaggaggcta tgaaagtgaa
     3061 actccggaga ccccggtggt tttacgtcgc aaagctgagg gagacaattc gcaacagcag
     3121 caacaacaac ctacccgacg tattggaggt cttctgacac gcgaagaaat tttgcagaaa
     3181 attaaagaat tctgccgcaa gtcgatcaat aagactccaa ccaatcaagc ccccgtccca
     3241 ttgcaagcca tttacgagaa gcagccaact ggaacagatc tctcgcccgt ctcgtacgtt
     3301 tcggtggaga cccatcaaag gcctgcatca cgtatgtatg cagctcctca agtaccacag
     3361 cgcatgcaca gcctaccggc agccgcaact gctacaggtc actttgtgcc catagcccaa
     3421 gaaatagtta ccgatcccaa tacgaactca ccaatttatg cccatgtcgt taagagaggc
     3481 agtctgcaat cgaatcaatc ggaattatat gaaattcccc aaaggacttt ggtggccgct
     3541 ccgccaccta cccaatattt catacgaaga gaggcggctc caacagaatt gaaacctgtc
     3601 tacatacgcc aaggtacatt gcaacgaccc gaaagtgcct tttcgccagc cccaacccag
     3661 tacatactgg tggatggaga aaaactacaa cctgcacaac ttatagcagc ctacccacaa
     3721 actgagctgt atgcccaacc acaatacatt cggccacatc agctccagtc gatgccggga
     3781 gctagttatg gttatattac agtaagagag ccccttatcc atcaaggcca gccccaacat
     3841 ccacagatga tacgaccccg tttgcacgac ggccgtagta ctccattgat acttgatcgc
     3901 tcaagtcaac aagtgagtca aatctattgg accccacagc accagagact acaacagcag
     3961 gcgggactat taaccgatca gattagtcca cgttacgcac ttaagcagtc ttatgtgatg
     4021 cctggtccac aacagcagca gctattacaa aatcgtgcta caccccttat actacagcat
     4081 ccgcaacttt cgccccacat acaaaacatt ccagcacaac gccaatattc tccttcgcct
     4141 ctcattaggg aaccaactcc cactcaaacg atgcaccaga tacaacagac gaaaccacaa
     4201 cagccacaaa ttcaggagtt aaccttggcc aatgctcgac aaagtccagc attcgattgg
     4261 gaaagtggct ctgaggccgg tgaggttcag cgaattatgg agaagcaaca acagcacgac
     4321 caaaaaaccg atctaaatta tttacatttg gatttgccta aagcccatca gttgcagata
     4381 acacaaaatg gataaatctt taaagaagga gctggagaat agtaaagaac cctcaaaaga
     4441 accaaaagca accatccaca gcaccactag cagcacaccc accactacca