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PREDICTED: Stomoxys calcitrans formin-J (LOC106090515), transcript


LOCUS       XM_059366822            5140 bp    mRNA    linear   INV 02-SEP-2023
            variant X4, mRNA.
ACCESSION   XM_059366822
VERSION     XM_059366822.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5140
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..5140
                     /gene="LOC106090515"
                     /note="formin-J; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:106090515"
     CDS             930..5045
                     /gene="LOC106090515"
                     /codon_start=1
                     /product="formin-J"
                     /protein_id="XP_059222805.1"
                     /db_xref="GeneID:106090515"
                     /translation="MSEPLSNDVSTESLCTVIETSSNEYLSNKFKDPIKSTSLESLDT
                     NRISPQNNLKQNGCHVLRGSLDESCDTDTTEKSLNNATTEEEGECEKKPKSKLKKSVS
                     FDPNDEKIRKFITGEPIVDQQNPFKSNGYLANGTIAGAGSAKRKDKKTPPPVPAKRST
                     LSVRKTVTQQLREREREKEKERERLKNEANNRKSNGSIIKSPSDEFVSTEDVLKQSKY
                     VKTYIKNPDPYFVYDPTVLARLKFEELRELALKKPPKRIVPQQQQPPQPQPRERLKDL
                     KNRQNENKPTKPSTLTFKKCSKPNYPELSDLKIKTGTDLEDSLYNPLEVTKNAKKFDE
                     RVKKLHISSDDDLDEIEEPLTKSESSDDNNMNAGNRQSDDKMPPNEENGSVSREPSPP
                     PPGTFTNTIKSKEFQEYLEKKGLTLIPKKIPNGAQPLYGNKPQQSTPLKQISFKAEPE
                     RIQFSSNGTDSVDTGGNNRKPSVFQRLLANSIFASRRKTTPKEPVPIIKPLYEASNEN
                     GSLKPIKRVVLERQSFHGRPKAGNLLSPAEALELKQQLERSRKSYASGDDVPLSISSS
                     LTNAENPDLNDSQNFANIKPAGTPGLRRKELQAKTIAKPPRRTLSRDRITKYEPPKMV
                     LSERPTNVNNNLYTLAREQPAKNDANFRRTLDRQSMIPKRTTQQADKQQVFGRSSSMD
                     RNEILKRNINRNQQQRSNSVTGEALLAPITTKSRENVQETTFPVNDGPPITSTPIRQS
                     HTVNGLSTKTISPISSIPKKASQLGVYVDQQEWEKLRAIKEQTDKELYHRVMQQQQKL
                     QQQQQQQQQQQKSQQEEQKTPTSPPHASQQQQQSSNSEQKLENIYEHLPGGSQVRLAP
                     GESSTFTRGSPQRNTFSGIIRSNNRQVKIIDGKPVVAPETMQSSSKLINGPVPRSQSV
                     LDNVTRRGGYESETPETPVVLRRKAEGDNSQQQQQQPTRRIGGLLTREEILQKIKEFC
                     RKSINKTPTNQAPVPLQAIYEKQPTGTDLSPVSYVSVETHQRPASRMYAAPQVPQRMH
                     SLPAAATATGHFVPIAQEIVTDPNTNSPIYAHVVKRGSLQSNQSELYEIPQRTLVAAP
                     PPTQYFIRREAAPTELKPVYIRQGTLQRPESAFSPAPTQYILVDGEKLQPAQLIAAYP
                     QTELYAQPQYIRPHQLQSMPGASYGYITVREPLIHQGQPQHPQMIRPRLHDGRSTPLI
                     LDRSSQQVSQIYWTPQHQRLQQQAGLLTDQISPRYALKQSYVMPGPQQQQLLQNRATP
                     LILQHPQLSPHIQNIPAQRQYSPSPLIREPTPTQTMHQIQQTKPQQPQIQELTLANAR
                     QSPAFDWESGSEAGEVQRIMEKQQQHDQKTDLNYLHLDLPKAHQLQITQNG"
ORIGIN      
        1 acgagaactt gaaccggttg gttgtcatta gagttgaacg aatcaagaaa aacgccgaca
       61 atttgttttt ttaaagaata attttagtaa agcgcaaaat ttaaaaaaga aaaaaccatc
      121 gaaaaaatta acttaaatga ttagttggca attttttttt gctgttttat tgtttttcta
      181 aaattcgtat tattaaaaaa tatattcgaa aataaaacgt gtcatgaaat tttgctttgt
      241 taaaaaaaaa caaaaagtgg tggttaactg gaataatttg aaagccacga attttatgct
      301 ctccggtatt tttggggttg tttaactaac caaatcgaca aaacaacaac agtgtgtttt
      361 acctaattgt tctgaaactt aaggaacata acccacattt caactaaatt tgccacaaca
      421 gatttagcac attttttgct atatctctaa aaacttatct ttacaactac attcacagaa
      481 aaataacagc aacaaaataa aaaaaaaaac aaaaagaaag acaacaaaat gcttttgtcc
      541 cccgctataa caatcaccac gagcaccacc gccccataag aatgccgcaa aactccacca
      601 catgatacac tacgctactc tacctttttg tttaaacgaa agtaaactac aaccaaccgt
      661 tatcagttcg tagcgctttg tgtatgccgt ttgctcagcg aaagaccgac aaatttctat
      721 atagaacacg aacatttaaa cagcaatcat caagtttctc tgtcatataa aactactgac
      781 aatcaaagga ttattccaga atattcaatg caagccaata tcgctgcccg ctaccgcaat
      841 ttttcttcga ttctcccttc tcaaacccaa ctatcgcccc tcaactgcaa ctttagatct
      901 gtagccagca acagcagccg ccggacgaca tgtcagaacc acttagtaat gatgttagca
      961 ccgaatcctt atgtacagtc atagaaacca gtagcaacga atatctatcg aataaattta
     1021 aagatcccat aaaaagcacc tcactagaat cgctcgacac aaatcgcata tcgccgcaga
     1081 ataatctcaa acaaaatggt tgtcacgtcc tacgtggttc tctagacgaa agctgtgata
     1141 cagatacaac agaaaagtcc cttaacaacg ccacaaccga agaggagggc gaatgtgaaa
     1201 agaagcccaa atcaaaattg aaaaaatccg tctcgttcga tccgaatgat gaaaagatac
     1261 gaaaattcat aacaggcgaa cccatagtag atcaacagaa tcccttcaag agtaatggtt
     1321 atttagcaaa cggcaccatc gccggagcag gaagtgccaa gagaaaggac aagaaaacgc
     1381 caccaccggt gccggccaaa cgctcaacgc tcagtgtgcg aaaaaccgtt acccaacagt
     1441 tgagggaacg tgaaagggaa aaggagaagg aaagggagcg cctcaagaac gaggcgaata
     1501 atcgcaaaag caatggcagc attattaaat caccgtccga tgagtttgtc tccacagaag
     1561 atgtgctaaa gcagtcaaaa tacgtaaaga cctacatcaa gaatccagat ccctattttg
     1621 tctatgatcc aacagtatta gctcgtttga aattcgaaga gctacgagaa ctagctttaa
     1681 aaaagccacc aaagaggata gtaccacagc aacagcagcc accgcagccc cagccaaggg
     1741 aacgtctgaa ggatttgaaa aatcgccaaa acgaaaataa gcccacaaag ccgtcaacgc
     1801 tgacattcaa aaaatgttcc aagcccaact atccagaact atcggatttg aaaattaaaa
     1861 ccggcacaga tttggaggat agcctttaca accccttgga agttaccaag aatgccaaga
     1921 aattcgatga gagagttaaa aaattgcata tatcctccga tgatgacctg gacgaaattg
     1981 aagagccttt aactaaaagt gagtcaagtg atgataataa catgaatgct ggaaatcgcc
     2041 aatcagacga caaaatgccc ccaaatgaag aaaatggtag tgtgagtagg gaaccttcac
     2101 ccccgcctcc cggaacattt accaacacca tcaaatcgaa agaatttcaa gaatatttgg
     2161 agaaaaaggg actcaccttg atacccaaga aaatacccaa cggcgcccaa ccgctgtatg
     2221 gcaacaagcc gcagcaatcc acacccctaa aacaaattag ctttaaagcc gaacccgagc
     2281 gcatacaatt ttcctccaat ggcaccgatt cggtggacac tggcggaaat aatcgcaaac
     2341 cttcagtatt tcagagacta ttggccaata gtatatttgc ttcgcgtcga aaaacgacac
     2401 ccaaagaacc ggttcctata atcaagcctc tttatgaagc aagcaatgag aatggttcct
     2461 taaagcccat taaacgtgtt gtactggagc gtcagagttt ccatggaaga cccaaggcgg
     2521 gaaatttgct gagtccagcc gaagccctgg aactaaagca gcaattggag aggtcccgca
     2581 aaagttacgc cagtggtgac gatgtgccgc tatcgatctc aagttctttg accaatgccg
     2641 aaaatcccga cttaaatgat tcacagaatt ttgcaaatat taaaccagcc ggaacacctg
     2701 gcttaagaag gaaagagttg caagcaaaaa ctatagccaa gccaccacgg cgtaccttat
     2761 caagagatcg cataactaag tacgaaccac caaagatggt gcttagcgag cgtcccacaa
     2821 atgtcaacaa caatttgtac actttggccc gcgaacagcc tgcaaagaat gatgcgaatt
     2881 ttaggcgaac cctggatcgg caaagcatga taccgaaacg aaccacccaa caagcggata
     2941 aacagcaagt tttcggcaga tcctcgtcca tggatcgaaa tgagattttg aagagaaata
     3001 ttaaccgcaa ccagcaacaa agatcaaata gtgtgacggg agaagccctg ttggctccca
     3061 tcaccaccaa atctcgagag aatgtacaag aaaccacatt tccggtaaat gatggcccgc
     3121 ctataacatc cacacccatt aggcagtctc atacggtcaa tggtctcagc acaaaaacaa
     3181 tttctcccat atcctccatt cccaagaagg cgtcacagct gggagtttat gtggaccagc
     3241 aggagtggga aaaactgaga gctataaagg agcaaactga caaagaacta taccataggg
     3301 ttatgcagca acaacagaaa ctgcaacagc aacaacaaca acaacaacag cagcaaaagt
     3361 cccaacaaga agagcaaaaa acccccacgt ctcctccaca tgcttctcaa caacaacagc
     3421 aaagttctaa ttcagaacag aaactggaaa atatttatga acatttgcca ggaggcagcc
     3481 aagtgcgctt ggctccaggc gaatccagca ccttcactag aggctcacca caacgcaata
     3541 ccttttccgg cattatacgt tccaataatc ggcaagtaaa aataatcgat ggcaaaccag
     3601 tggtggcccc agaaaccatg caatcgtctt ctaagcttat caatggtccc gtaccacgct
     3661 ctcaaagtgt tttggataat gtgacacgcc gaggaggcta tgaaagtgaa actccggaga
     3721 ccccggtggt tttacgtcgc aaagctgagg gagacaattc gcaacagcag caacaacaac
     3781 ctacccgacg tattggaggt cttctgacac gcgaagaaat tttgcagaaa attaaagaat
     3841 tctgccgcaa gtcgatcaat aagactccaa ccaatcaagc ccccgtccca ttgcaagcca
     3901 tttacgagaa gcagccaact ggaacagatc tctcgcccgt ctcgtacgtt tcggtggaga
     3961 cccatcaaag gcctgcatca cgtatgtatg cagctcctca agtaccacag cgcatgcaca
     4021 gcctaccggc agccgcaact gctacaggtc actttgtgcc catagcccaa gaaatagtta
     4081 ccgatcccaa tacgaactca ccaatttatg cccatgtcgt taagagaggc agtctgcaat
     4141 cgaatcaatc ggaattatat gaaattcccc aaaggacttt ggtggccgct ccgccaccta
     4201 cccaatattt catacgaaga gaggcggctc caacagaatt gaaacctgtc tacatacgcc
     4261 aaggtacatt gcaacgaccc gaaagtgcct tttcgccagc cccaacccag tacatactgg
     4321 tggatggaga aaaactacaa cctgcacaac ttatagcagc ctacccacaa actgagctgt
     4381 atgcccaacc acaatacatt cggccacatc agctccagtc gatgccggga gctagttatg
     4441 gttatattac agtaagagag ccccttatcc atcaaggcca gccccaacat ccacagatga
     4501 tacgaccccg tttgcacgac ggccgtagta ctccattgat acttgatcgc tcaagtcaac
     4561 aagtgagtca aatctattgg accccacagc accagagact acaacagcag gcgggactat
     4621 taaccgatca gattagtcca cgttacgcac ttaagcagtc ttatgtgatg cctggtccac
     4681 aacagcagca gctattacaa aatcgtgcta caccccttat actacagcat ccgcaacttt
     4741 cgccccacat acaaaacatt ccagcacaac gccaatattc tccttcgcct ctcattaggg
     4801 aaccaactcc cactcaaacg atgcaccaga tacaacagac gaaaccacaa cagccacaaa
     4861 ttcaggagtt aaccttggcc aatgctcgac aaagtccagc attcgattgg gaaagtggct
     4921 ctgaggccgg tgaggttcag cgaattatgg agaagcaaca acagcacgac caaaaaaccg
     4981 atctaaatta tttacatttg gatttgccta aagcccatca gttgcagata acacaaaatg
     5041 gataaatctt taaagaagga gctggagaat agtaaagaac cctcaaaaga accaaaagca
     5101 accatccaca gcaccactag cagcacaccc accactacca