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PREDICTED: Stomoxys calcitrans formin-J (LOC106090515), transcript


LOCUS       XM_059366820            5640 bp    mRNA    linear   INV 02-SEP-2023
            variant X2, mRNA.
ACCESSION   XM_059366820
VERSION     XM_059366820.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5640
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..5640
                     /gene="LOC106090515"
                     /note="formin-J; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:106090515"
     CDS             1430..5545
                     /gene="LOC106090515"
                     /codon_start=1
                     /product="formin-J"
                     /protein_id="XP_059222803.1"
                     /db_xref="GeneID:106090515"
                     /translation="MSEPLSNDVSTESLCTVIETSSNEYLSNKFKDPIKSTSLESLDT
                     NRISPQNNLKQNGCHVLRGSLDESCDTDTTEKSLNNATTEEEGECEKKPKSKLKKSVS
                     FDPNDEKIRKFITGEPIVDQQNPFKSNGYLANGTIAGAGSAKRKDKKTPPPVPAKRST
                     LSVRKTVTQQLREREREKEKERERLKNEANNRKSNGSIIKSPSDEFVSTEDVLKQSKY
                     VKTYIKNPDPYFVYDPTVLARLKFEELRELALKKPPKRIVPQQQQPPQPQPRERLKDL
                     KNRQNENKPTKPSTLTFKKCSKPNYPELSDLKIKTGTDLEDSLYNPLEVTKNAKKFDE
                     RVKKLHISSDDDLDEIEEPLTKSESSDDNNMNAGNRQSDDKMPPNEENGSVSREPSPP
                     PPGTFTNTIKSKEFQEYLEKKGLTLIPKKIPNGAQPLYGNKPQQSTPLKQISFKAEPE
                     RIQFSSNGTDSVDTGGNNRKPSVFQRLLANSIFASRRKTTPKEPVPIIKPLYEASNEN
                     GSLKPIKRVVLERQSFHGRPKAGNLLSPAEALELKQQLERSRKSYASGDDVPLSISSS
                     LTNAENPDLNDSQNFANIKPAGTPGLRRKELQAKTIAKPPRRTLSRDRITKYEPPKMV
                     LSERPTNVNNNLYTLAREQPAKNDANFRRTLDRQSMIPKRTTQQADKQQVFGRSSSMD
                     RNEILKRNINRNQQQRSNSVTGEALLAPITTKSRENVQETTFPVNDGPPITSTPIRQS
                     HTVNGLSTKTISPISSIPKKASQLGVYVDQQEWEKLRAIKEQTDKELYHRVMQQQQKL
                     QQQQQQQQQQQKSQQEEQKTPTSPPHASQQQQQSSNSEQKLENIYEHLPGGSQVRLAP
                     GESSTFTRGSPQRNTFSGIIRSNNRQVKIIDGKPVVAPETMQSSSKLINGPVPRSQSV
                     LDNVTRRGGYESETPETPVVLRRKAEGDNSQQQQQQPTRRIGGLLTREEILQKIKEFC
                     RKSINKTPTNQAPVPLQAIYEKQPTGTDLSPVSYVSVETHQRPASRMYAAPQVPQRMH
                     SLPAAATATGHFVPIAQEIVTDPNTNSPIYAHVVKRGSLQSNQSELYEIPQRTLVAAP
                     PPTQYFIRREAAPTELKPVYIRQGTLQRPESAFSPAPTQYILVDGEKLQPAQLIAAYP
                     QTELYAQPQYIRPHQLQSMPGASYGYITVREPLIHQGQPQHPQMIRPRLHDGRSTPLI
                     LDRSSQQVSQIYWTPQHQRLQQQAGLLTDQISPRYALKQSYVMPGPQQQQLLQNRATP
                     LILQHPQLSPHIQNIPAQRQYSPSPLIREPTPTQTMHQIQQTKPQQPQIQELTLANAR
                     QSPAFDWESGSEAGEVQRIMEKQQQHDQKTDLNYLHLDLPKAHQLQITQNG"
ORIGIN      
        1 acgagaactt gaaccggttg gttgtcatta gagttgaacg aatcaagaaa aacgccgaca
       61 atttgttttt ttaaagaata attttagtaa agcgcaaaat ttaaaaaaga aaaaaccatc
      121 gaaaaaatta acttaaatga ttagttggca attttttttt gctgttttat tgtttttcta
      181 aaattcgtat tattaaaaaa tatattcgaa aataaaacgt gtcatgaaat tttgctttgt
      241 taaaaaaaaa caaaaagtgg tggttaactg gaataatttg aaagccacga attttatgct
      301 ctccggtatt tttggggttg tttaactaac caaatcgaca aaacaacaac agtgtgtttt
      361 acctaattgt tctgaaactt aagttaaaag ctgccttacg cctatattga ataaataacg
      421 caaaaagttt gaacgataac aaaaattcaa gtgatacccc aaatgcccat atttttccag
      481 gaacataacc cacatttcaa ctaaatttgc cacaacagat ttagcacatt ttttgctata
      541 tctctaaaaa cttatcttta caactacatt cacagaaaaa taacagcaac aaaataaaaa
      601 aaaaaacaaa aagaaagaca acaaaatgct tttgtccccc gctataacaa tcaccacgag
      661 caccaccgcc ccataagaat gccgcaaaac tccaccacat gatacactac gctactctac
      721 ctttttgttt aaacgaaagt aaactacaac caaccgttat cagttcgtag cgctttgtgt
      781 atgccgtttg ctcagcgaaa gaccgacaaa tttctatata gaacacgaac atttaaacag
      841 caatcatcaa gacatcatct attcgattgt ggacaagcct cagatagaga tttcatcgtc
      901 attctcgtgg tttcatagat tttactgttg taagctcact cactcgaatt tcggagtctg
      961 attgctagct acccatgcct gccacacagc cattaccatt ggtattaccc agtgctacct
     1021 attgctgtta cctcgctgct gacttgctgc tgtaaatatc atcatcgttg tccatgattc
     1081 gtaaaaatgg tgatggcata gatgatgatt atgatgttgc cgctgtgatg tgatgagagc
     1141 tgttgttgtt gtcgttgtct gttgtcgaga tgaaaacaac cgccgctaat aattgtaatg
     1201 attggtaatg gaataacggc atattaaaag aaattaagag gaaacaatac taaatttctc
     1261 tgtcatataa aactactgac aatcaaagga ttattccaga atattcaatg caagccaata
     1321 tcgctgcccg ctaccgcaat ttttcttcga ttctcccttc tcaaacccaa ctatcgcccc
     1381 tcaactgcaa ctttagatct gtagccagca acagcagccg ccggacgaca tgtcagaacc
     1441 acttagtaat gatgttagca ccgaatcctt atgtacagtc atagaaacca gtagcaacga
     1501 atatctatcg aataaattta aagatcccat aaaaagcacc tcactagaat cgctcgacac
     1561 aaatcgcata tcgccgcaga ataatctcaa acaaaatggt tgtcacgtcc tacgtggttc
     1621 tctagacgaa agctgtgata cagatacaac agaaaagtcc cttaacaacg ccacaaccga
     1681 agaggagggc gaatgtgaaa agaagcccaa atcaaaattg aaaaaatccg tctcgttcga
     1741 tccgaatgat gaaaagatac gaaaattcat aacaggcgaa cccatagtag atcaacagaa
     1801 tcccttcaag agtaatggtt atttagcaaa cggcaccatc gccggagcag gaagtgccaa
     1861 gagaaaggac aagaaaacgc caccaccggt gccggccaaa cgctcaacgc tcagtgtgcg
     1921 aaaaaccgtt acccaacagt tgagggaacg tgaaagggaa aaggagaagg aaagggagcg
     1981 cctcaagaac gaggcgaata atcgcaaaag caatggcagc attattaaat caccgtccga
     2041 tgagtttgtc tccacagaag atgtgctaaa gcagtcaaaa tacgtaaaga cctacatcaa
     2101 gaatccagat ccctattttg tctatgatcc aacagtatta gctcgtttga aattcgaaga
     2161 gctacgagaa ctagctttaa aaaagccacc aaagaggata gtaccacagc aacagcagcc
     2221 accgcagccc cagccaaggg aacgtctgaa ggatttgaaa aatcgccaaa acgaaaataa
     2281 gcccacaaag ccgtcaacgc tgacattcaa aaaatgttcc aagcccaact atccagaact
     2341 atcggatttg aaaattaaaa ccggcacaga tttggaggat agcctttaca accccttgga
     2401 agttaccaag aatgccaaga aattcgatga gagagttaaa aaattgcata tatcctccga
     2461 tgatgacctg gacgaaattg aagagccttt aactaaaagt gagtcaagtg atgataataa
     2521 catgaatgct ggaaatcgcc aatcagacga caaaatgccc ccaaatgaag aaaatggtag
     2581 tgtgagtagg gaaccttcac ccccgcctcc cggaacattt accaacacca tcaaatcgaa
     2641 agaatttcaa gaatatttgg agaaaaaggg actcaccttg atacccaaga aaatacccaa
     2701 cggcgcccaa ccgctgtatg gcaacaagcc gcagcaatcc acacccctaa aacaaattag
     2761 ctttaaagcc gaacccgagc gcatacaatt ttcctccaat ggcaccgatt cggtggacac
     2821 tggcggaaat aatcgcaaac cttcagtatt tcagagacta ttggccaata gtatatttgc
     2881 ttcgcgtcga aaaacgacac ccaaagaacc ggttcctata atcaagcctc tttatgaagc
     2941 aagcaatgag aatggttcct taaagcccat taaacgtgtt gtactggagc gtcagagttt
     3001 ccatggaaga cccaaggcgg gaaatttgct gagtccagcc gaagccctgg aactaaagca
     3061 gcaattggag aggtcccgca aaagttacgc cagtggtgac gatgtgccgc tatcgatctc
     3121 aagttctttg accaatgccg aaaatcccga cttaaatgat tcacagaatt ttgcaaatat
     3181 taaaccagcc ggaacacctg gcttaagaag gaaagagttg caagcaaaaa ctatagccaa
     3241 gccaccacgg cgtaccttat caagagatcg cataactaag tacgaaccac caaagatggt
     3301 gcttagcgag cgtcccacaa atgtcaacaa caatttgtac actttggccc gcgaacagcc
     3361 tgcaaagaat gatgcgaatt ttaggcgaac cctggatcgg caaagcatga taccgaaacg
     3421 aaccacccaa caagcggata aacagcaagt tttcggcaga tcctcgtcca tggatcgaaa
     3481 tgagattttg aagagaaata ttaaccgcaa ccagcaacaa agatcaaata gtgtgacggg
     3541 agaagccctg ttggctccca tcaccaccaa atctcgagag aatgtacaag aaaccacatt
     3601 tccggtaaat gatggcccgc ctataacatc cacacccatt aggcagtctc atacggtcaa
     3661 tggtctcagc acaaaaacaa tttctcccat atcctccatt cccaagaagg cgtcacagct
     3721 gggagtttat gtggaccagc aggagtggga aaaactgaga gctataaagg agcaaactga
     3781 caaagaacta taccataggg ttatgcagca acaacagaaa ctgcaacagc aacaacaaca
     3841 acaacaacag cagcaaaagt cccaacaaga agagcaaaaa acccccacgt ctcctccaca
     3901 tgcttctcaa caacaacagc aaagttctaa ttcagaacag aaactggaaa atatttatga
     3961 acatttgcca ggaggcagcc aagtgcgctt ggctccaggc gaatccagca ccttcactag
     4021 aggctcacca caacgcaata ccttttccgg cattatacgt tccaataatc ggcaagtaaa
     4081 aataatcgat ggcaaaccag tggtggcccc agaaaccatg caatcgtctt ctaagcttat
     4141 caatggtccc gtaccacgct ctcaaagtgt tttggataat gtgacacgcc gaggaggcta
     4201 tgaaagtgaa actccggaga ccccggtggt tttacgtcgc aaagctgagg gagacaattc
     4261 gcaacagcag caacaacaac ctacccgacg tattggaggt cttctgacac gcgaagaaat
     4321 tttgcagaaa attaaagaat tctgccgcaa gtcgatcaat aagactccaa ccaatcaagc
     4381 ccccgtccca ttgcaagcca tttacgagaa gcagccaact ggaacagatc tctcgcccgt
     4441 ctcgtacgtt tcggtggaga cccatcaaag gcctgcatca cgtatgtatg cagctcctca
     4501 agtaccacag cgcatgcaca gcctaccggc agccgcaact gctacaggtc actttgtgcc
     4561 catagcccaa gaaatagtta ccgatcccaa tacgaactca ccaatttatg cccatgtcgt
     4621 taagagaggc agtctgcaat cgaatcaatc ggaattatat gaaattcccc aaaggacttt
     4681 ggtggccgct ccgccaccta cccaatattt catacgaaga gaggcggctc caacagaatt
     4741 gaaacctgtc tacatacgcc aaggtacatt gcaacgaccc gaaagtgcct tttcgccagc
     4801 cccaacccag tacatactgg tggatggaga aaaactacaa cctgcacaac ttatagcagc
     4861 ctacccacaa actgagctgt atgcccaacc acaatacatt cggccacatc agctccagtc
     4921 gatgccggga gctagttatg gttatattac agtaagagag ccccttatcc atcaaggcca
     4981 gccccaacat ccacagatga tacgaccccg tttgcacgac ggccgtagta ctccattgat
     5041 acttgatcgc tcaagtcaac aagtgagtca aatctattgg accccacagc accagagact
     5101 acaacagcag gcgggactat taaccgatca gattagtcca cgttacgcac ttaagcagtc
     5161 ttatgtgatg cctggtccac aacagcagca gctattacaa aatcgtgcta caccccttat
     5221 actacagcat ccgcaacttt cgccccacat acaaaacatt ccagcacaac gccaatattc
     5281 tccttcgcct ctcattaggg aaccaactcc cactcaaacg atgcaccaga tacaacagac
     5341 gaaaccacaa cagccacaaa ttcaggagtt aaccttggcc aatgctcgac aaagtccagc
     5401 attcgattgg gaaagtggct ctgaggccgg tgaggttcag cgaattatgg agaagcaaca
     5461 acagcacgac caaaaaaccg atctaaatta tttacatttg gatttgccta aagcccatca
     5521 gttgcagata acacaaaatg gataaatctt taaagaagga gctggagaat agtaaagaac
     5581 cctcaaaaga accaaaagca accatccaca gcaccactag cagcacaccc accactacca