Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans formin-J (LOC106090515), transcript


LOCUS       XM_059366819            5237 bp    mRNA    linear   INV 02-SEP-2023
            variant X1, mRNA.
ACCESSION   XM_059366819
VERSION     XM_059366819.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5237
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..5237
                     /gene="LOC106090515"
                     /note="formin-J; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:106090515"
     CDS             1027..5142
                     /gene="LOC106090515"
                     /codon_start=1
                     /product="formin-J"
                     /protein_id="XP_059222802.1"
                     /db_xref="GeneID:106090515"
                     /translation="MSEPLSNDVSTESLCTVIETSSNEYLSNKFKDPIKSTSLESLDT
                     NRISPQNNLKQNGCHVLRGSLDESCDTDTTEKSLNNATTEEEGECEKKPKSKLKKSVS
                     FDPNDEKIRKFITGEPIVDQQNPFKSNGYLANGTIAGAGSAKRKDKKTPPPVPAKRST
                     LSVRKTVTQQLREREREKEKERERLKNEANNRKSNGSIIKSPSDEFVSTEDVLKQSKY
                     VKTYIKNPDPYFVYDPTVLARLKFEELRELALKKPPKRIVPQQQQPPQPQPRERLKDL
                     KNRQNENKPTKPSTLTFKKCSKPNYPELSDLKIKTGTDLEDSLYNPLEVTKNAKKFDE
                     RVKKLHISSDDDLDEIEEPLTKSESSDDNNMNAGNRQSDDKMPPNEENGSVSREPSPP
                     PPGTFTNTIKSKEFQEYLEKKGLTLIPKKIPNGAQPLYGNKPQQSTPLKQISFKAEPE
                     RIQFSSNGTDSVDTGGNNRKPSVFQRLLANSIFASRRKTTPKEPVPIIKPLYEASNEN
                     GSLKPIKRVVLERQSFHGRPKAGNLLSPAEALELKQQLERSRKSYASGDDVPLSISSS
                     LTNAENPDLNDSQNFANIKPAGTPGLRRKELQAKTIAKPPRRTLSRDRITKYEPPKMV
                     LSERPTNVNNNLYTLAREQPAKNDANFRRTLDRQSMIPKRTTQQADKQQVFGRSSSMD
                     RNEILKRNINRNQQQRSNSVTGEALLAPITTKSRENVQETTFPVNDGPPITSTPIRQS
                     HTVNGLSTKTISPISSIPKKASQLGVYVDQQEWEKLRAIKEQTDKELYHRVMQQQQKL
                     QQQQQQQQQQQKSQQEEQKTPTSPPHASQQQQQSSNSEQKLENIYEHLPGGSQVRLAP
                     GESSTFTRGSPQRNTFSGIIRSNNRQVKIIDGKPVVAPETMQSSSKLINGPVPRSQSV
                     LDNVTRRGGYESETPETPVVLRRKAEGDNSQQQQQQPTRRIGGLLTREEILQKIKEFC
                     RKSINKTPTNQAPVPLQAIYEKQPTGTDLSPVSYVSVETHQRPASRMYAAPQVPQRMH
                     SLPAAATATGHFVPIAQEIVTDPNTNSPIYAHVVKRGSLQSNQSELYEIPQRTLVAAP
                     PPTQYFIRREAAPTELKPVYIRQGTLQRPESAFSPAPTQYILVDGEKLQPAQLIAAYP
                     QTELYAQPQYIRPHQLQSMPGASYGYITVREPLIHQGQPQHPQMIRPRLHDGRSTPLI
                     LDRSSQQVSQIYWTPQHQRLQQQAGLLTDQISPRYALKQSYVMPGPQQQQLLQNRATP
                     LILQHPQLSPHIQNIPAQRQYSPSPLIREPTPTQTMHQIQQTKPQQPQIQELTLANAR
                     QSPAFDWESGSEAGEVQRIMEKQQQHDQKTDLNYLHLDLPKAHQLQITQNG"
ORIGIN      
        1 acgagaactt gaaccggttg gttgtcatta gagttgaacg aatcaagaaa aacgccgaca
       61 atttgttttt ttaaagaata attttagtaa agcgcaaaat ttaaaaaaga aaaaaccatc
      121 gaaaaaatta acttaaatga ttagttggca attttttttt gctgttttat tgtttttcta
      181 aaattcgtat tattaaaaaa tatattcgaa aataaaacgt gtcatgaaat tttgctttgt
      241 taaaaaaaaa caaaaagtgg tggttaactg gaataatttg aaagccacga attttatgct
      301 ctccggtatt tttggggttg tttaactaac caaatcgaca aaacaacaac agtgtgtttt
      361 acctaattgt tctgaaactt aagttaaaag ctgccttacg cctatattga ataaataacg
      421 caaaaagttt gaacgataac aaaaattcaa gtgatacccc aaatgcccat atttttccag
      481 gaacataacc cacatttcaa ctaaatttgc cacaacagat ttagcacatt ttttgctata
      541 tctctaaaaa cttatcttta caactacatt cacagaaaaa taacagcaac aaaataaaaa
      601 aaaaaacaaa aagaaagaca acaaaatgct tttgtccccc gctataacaa tcaccacgag
      661 caccaccgcc ccataagaat gccgcaaaac tccaccacat gatacactac gctactctac
      721 ctttttgttt aaacgaaagt aaactacaac caaccgttat cagttcgtag cgctttgtgt
      781 atgccgtttg ctcagcgaaa gaccgacaaa tttctatata gaacacgaac atttaaacag
      841 caatcatcaa gtttctctgt catataaaac tactgacaat caaaggatta ttccagaata
      901 ttcaatgcaa gccaatatcg ctgcccgcta ccgcaatttt tcttcgattc tcccttctca
      961 aacccaacta tcgcccctca actgcaactt tagatctgta gccagcaaca gcagccgccg
     1021 gacgacatgt cagaaccact tagtaatgat gttagcaccg aatccttatg tacagtcata
     1081 gaaaccagta gcaacgaata tctatcgaat aaatttaaag atcccataaa aagcacctca
     1141 ctagaatcgc tcgacacaaa tcgcatatcg ccgcagaata atctcaaaca aaatggttgt
     1201 cacgtcctac gtggttctct agacgaaagc tgtgatacag atacaacaga aaagtccctt
     1261 aacaacgcca caaccgaaga ggagggcgaa tgtgaaaaga agcccaaatc aaaattgaaa
     1321 aaatccgtct cgttcgatcc gaatgatgaa aagatacgaa aattcataac aggcgaaccc
     1381 atagtagatc aacagaatcc cttcaagagt aatggttatt tagcaaacgg caccatcgcc
     1441 ggagcaggaa gtgccaagag aaaggacaag aaaacgccac caccggtgcc ggccaaacgc
     1501 tcaacgctca gtgtgcgaaa aaccgttacc caacagttga gggaacgtga aagggaaaag
     1561 gagaaggaaa gggagcgcct caagaacgag gcgaataatc gcaaaagcaa tggcagcatt
     1621 attaaatcac cgtccgatga gtttgtctcc acagaagatg tgctaaagca gtcaaaatac
     1681 gtaaagacct acatcaagaa tccagatccc tattttgtct atgatccaac agtattagct
     1741 cgtttgaaat tcgaagagct acgagaacta gctttaaaaa agccaccaaa gaggatagta
     1801 ccacagcaac agcagccacc gcagccccag ccaagggaac gtctgaagga tttgaaaaat
     1861 cgccaaaacg aaaataagcc cacaaagccg tcaacgctga cattcaaaaa atgttccaag
     1921 cccaactatc cagaactatc ggatttgaaa attaaaaccg gcacagattt ggaggatagc
     1981 ctttacaacc ccttggaagt taccaagaat gccaagaaat tcgatgagag agttaaaaaa
     2041 ttgcatatat cctccgatga tgacctggac gaaattgaag agcctttaac taaaagtgag
     2101 tcaagtgatg ataataacat gaatgctgga aatcgccaat cagacgacaa aatgccccca
     2161 aatgaagaaa atggtagtgt gagtagggaa ccttcacccc cgcctcccgg aacatttacc
     2221 aacaccatca aatcgaaaga atttcaagaa tatttggaga aaaagggact caccttgata
     2281 cccaagaaaa tacccaacgg cgcccaaccg ctgtatggca acaagccgca gcaatccaca
     2341 cccctaaaac aaattagctt taaagccgaa cccgagcgca tacaattttc ctccaatggc
     2401 accgattcgg tggacactgg cggaaataat cgcaaacctt cagtatttca gagactattg
     2461 gccaatagta tatttgcttc gcgtcgaaaa acgacaccca aagaaccggt tcctataatc
     2521 aagcctcttt atgaagcaag caatgagaat ggttccttaa agcccattaa acgtgttgta
     2581 ctggagcgtc agagtttcca tggaagaccc aaggcgggaa atttgctgag tccagccgaa
     2641 gccctggaac taaagcagca attggagagg tcccgcaaaa gttacgccag tggtgacgat
     2701 gtgccgctat cgatctcaag ttctttgacc aatgccgaaa atcccgactt aaatgattca
     2761 cagaattttg caaatattaa accagccgga acacctggct taagaaggaa agagttgcaa
     2821 gcaaaaacta tagccaagcc accacggcgt accttatcaa gagatcgcat aactaagtac
     2881 gaaccaccaa agatggtgct tagcgagcgt cccacaaatg tcaacaacaa tttgtacact
     2941 ttggcccgcg aacagcctgc aaagaatgat gcgaatttta ggcgaaccct ggatcggcaa
     3001 agcatgatac cgaaacgaac cacccaacaa gcggataaac agcaagtttt cggcagatcc
     3061 tcgtccatgg atcgaaatga gattttgaag agaaatatta accgcaacca gcaacaaaga
     3121 tcaaatagtg tgacgggaga agccctgttg gctcccatca ccaccaaatc tcgagagaat
     3181 gtacaagaaa ccacatttcc ggtaaatgat ggcccgccta taacatccac acccattagg
     3241 cagtctcata cggtcaatgg tctcagcaca aaaacaattt ctcccatatc ctccattccc
     3301 aagaaggcgt cacagctggg agtttatgtg gaccagcagg agtgggaaaa actgagagct
     3361 ataaaggagc aaactgacaa agaactatac catagggtta tgcagcaaca acagaaactg
     3421 caacagcaac aacaacaaca acaacagcag caaaagtccc aacaagaaga gcaaaaaacc
     3481 cccacgtctc ctccacatgc ttctcaacaa caacagcaaa gttctaattc agaacagaaa
     3541 ctggaaaata tttatgaaca tttgccagga ggcagccaag tgcgcttggc tccaggcgaa
     3601 tccagcacct tcactagagg ctcaccacaa cgcaatacct tttccggcat tatacgttcc
     3661 aataatcggc aagtaaaaat aatcgatggc aaaccagtgg tggccccaga aaccatgcaa
     3721 tcgtcttcta agcttatcaa tggtcccgta ccacgctctc aaagtgtttt ggataatgtg
     3781 acacgccgag gaggctatga aagtgaaact ccggagaccc cggtggtttt acgtcgcaaa
     3841 gctgagggag acaattcgca acagcagcaa caacaaccta cccgacgtat tggaggtctt
     3901 ctgacacgcg aagaaatttt gcagaaaatt aaagaattct gccgcaagtc gatcaataag
     3961 actccaacca atcaagcccc cgtcccattg caagccattt acgagaagca gccaactgga
     4021 acagatctct cgcccgtctc gtacgtttcg gtggagaccc atcaaaggcc tgcatcacgt
     4081 atgtatgcag ctcctcaagt accacagcgc atgcacagcc taccggcagc cgcaactgct
     4141 acaggtcact ttgtgcccat agcccaagaa atagttaccg atcccaatac gaactcacca
     4201 atttatgccc atgtcgttaa gagaggcagt ctgcaatcga atcaatcgga attatatgaa
     4261 attccccaaa ggactttggt ggccgctccg ccacctaccc aatatttcat acgaagagag
     4321 gcggctccaa cagaattgaa acctgtctac atacgccaag gtacattgca acgacccgaa
     4381 agtgcctttt cgccagcccc aacccagtac atactggtgg atggagaaaa actacaacct
     4441 gcacaactta tagcagccta cccacaaact gagctgtatg cccaaccaca atacattcgg
     4501 ccacatcagc tccagtcgat gccgggagct agttatggtt atattacagt aagagagccc
     4561 cttatccatc aaggccagcc ccaacatcca cagatgatac gaccccgttt gcacgacggc
     4621 cgtagtactc cattgatact tgatcgctca agtcaacaag tgagtcaaat ctattggacc
     4681 ccacagcacc agagactaca acagcaggcg ggactattaa ccgatcagat tagtccacgt
     4741 tacgcactta agcagtctta tgtgatgcct ggtccacaac agcagcagct attacaaaat
     4801 cgtgctacac cccttatact acagcatccg caactttcgc cccacataca aaacattcca
     4861 gcacaacgcc aatattctcc ttcgcctctc attagggaac caactcccac tcaaacgatg
     4921 caccagatac aacagacgaa accacaacag ccacaaattc aggagttaac cttggccaat
     4981 gctcgacaaa gtccagcatt cgattgggaa agtggctctg aggccggtga ggttcagcga
     5041 attatggaga agcaacaaca gcacgaccaa aaaaccgatc taaattattt acatttggat
     5101 ttgcctaaag cccatcagtt gcagataaca caaaatggat aaatctttaa agaaggagct
     5161 ggagaatagt aaagaaccct caaaagaacc aaaagcaacc atccacagca ccactagcag
     5221 cacacccacc actacca