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LOCUS XM_059366739 5403 bp mRNA linear INV 02-SEP-2023 transcript variant X2, mRNA. ACCESSION XM_059366739 VERSION XM_059366739.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5403 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5403 /gene="LOC106095672" /note="integrin alpha-PS1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:106095672" CDS 1655..5032 /gene="LOC106095672" /codon_start=1 /product="integrin alpha-PS1 isoform X2" /protein_id="XP_059222722.1" /db_xref="GeneID:106095672" /translation="MYSLPKLITALFSTFYCVLYSHSFNLENRLPIVKFNANPSSYFG YSVATHIVGEYNWPNNTKWLLVGAPLDKNLQPGTNKTGALYKCPITQNFNDCEQVITD GRRSYDSDDIEELAEPSDDEIKEDQWLGVTVRSQGLGGKVLVCAHRYITKVRENRYGQ GLCYVLTNELSYDEVYEPCKGRTVQRAHEDYGFCQVGTSAALFDDNTMVLGTPGPYTW RGTVFVTEIGGEYLERDKNMYYGDHSDSSSPVDKYSYLGMAVTGGRYFGERMSYAAGA PRSNGHGQVVIFDKDNRNPIPVHMIIEGEQFASSFGYELTTADINGDQKPDLIVAAPF YFNKTEGGAVYIYQNVNDMLPYKATLKLTGTFESRFGLALANIGDINKDHCDDLAIGA PYEDDGVVYIYLGNRVGLNSKPSQRIQASDLGLMSRPIRTFGSSITGGADLDGNSYTD VVVGAYASSAVVALLSRPIISIQTKWRSKELRNIDPTKSGCVADVFTNMTCFTFEACC SIDPYEETAANQDLKLMYTVEAETFASNKKFSRVFFDRENKRSNVVKREVTVRTDGRL ACNQVTGYIKENTRDIQSPIKFKLNYTLVETKLPDSGLKGLNPILDQTQANIEFEGTF QKDCGEDDVCDSNLILSAELDLNLENENYALVLGEQEEIRINVNVSNSADSAYETQLF IVHQKSVSYIAAIKTSTAICSRFNETVVACGLGNPMRRGTSAQVSVRFDPSGLELEES KLTFNIFANTTSKLIGAKKPQKKLDVRVIKRAELSLQGWARPEQSFYSGEMKLESTKM QMEDVGSQVLHTYQIYNEGPWKAPKVQLTIYWPYQVYSEKDKRDKWLLYLEEIPIIDN VRQGQCFVSSEYVNPLNLTTKAKNKPNLEDILSAPASYMMKPLNKTQFAHRTHMEKSS YSSSKQEIIGEDFSSSSTTAGFLNRLRRDTLTRIIRPERFMDMRGDHKNKKRDIVELD CTKATASCIKIQCDIYNMPANTEAYVHVKARLWNSTLMSEHARADAVRIISTAHVQIP PEFSVEQLQTAEPLTVETRAYPELIGQQRDTATPLWIIILAIIGGLLLLAFFTTAMWK CGFFKRRRPDPTLSGNLEKMNEEKPFLNAQKNNHRVF" ORIGIN 1 ggtatcatcg aaaaaaatac aagtaaacaa aagcgaaata aaaacaaaaa atcgttgaaa 61 atgaaatatt aaaaattgca taataagaag cttatcttaa gttaaaaaaa gataaccaaa 121 gaatttgttg gtactgaacg gaattgtttt gagtttggtc taaaaataag aaaaatggaa 181 tttgtcctgt taaccacgtg aatggaaatg tgaaatgtgt ctcaaattga aataaaaata 241 tatttttgat gagtaaaata aacaaatttg ggaaatagtt ttcaagtgca tttatgttat 301 tttgataatt tgaatatcaa gtgttttcgt gagagttctg aactacctgc ttgcctgtct 361 gcctgccacc caacatcgtt agaagctgca ttatcaaggc aacacaagtg cattttacaa 421 ctaccagccg ttgtggacta cccagccaac agccactata cgaggcaaac aaccagccgg 481 gcaatttaag tcaacctacc tgttgtgagg tgttaaagtg ttttgttttt tttttttttt 541 tttgtttcta acgcacaggc agacaacgaa tggtgacggt gtgcatcttt tgtgaaggtt 601 aattgttggt accactgacc atccatcgtt aagggagaga gaatcgtttg tctgtctgtc 661 ggtgtagcat ctctgttggg tgctcaaaac aaaacagaaa tcataagaaa acatttccaa 721 ccagacttag ttttgccagt ttctaagtaa atgcaaaata ccatgaatta aacataccaa 781 agacgaagcc taaacccagt ggttgtcgtt gtgtatgtca atgccaaaca acaacaacaa 841 caataaaagg ggcgacatta acaacaacaa aaatagccac attgtccaaa aagcactaat 901 tcttagtggt aaacaacttt agtaaaccaa gtccatacaa gttgcgatac aattattgtt 961 ctaccctctc ttcatctcac actcattcac tctttcatac tcatccccca ccacatgcta 1021 tcaaaataca acaccttaga aaaccaaaca aagcctctgc tcttttggga tatatgtgtg 1081 agagtaaaga agcagcagca gcagcagcag cacgttttat agggaacaca agagtgagtg 1141 tttgtgtatg tgtgtgtgtt tgagagatat cataaaagaa aagtatagct ctgcaacaac 1201 agacaacgtg accagtgacc ggttttaacg attaatttaa agttgtttac atactactct 1261 cctctccaga tctctaaccg gccgatttcg agatcacagt gctaagctaa acagctaagt 1321 ttaaggcaat tcccaagaaa aacccagcca catggcctac aattaaaaaa aaacaaaaca 1381 aagaagaaga aaaaacacca acaaaaaagt tccccatagc agaaaaaagg gaataccaaa 1441 caaacgaagg aggccaaata cttttggcgc ccatgaaagt gcaaaaagga tgcttttctc 1501 cccccttttt tttgcgatat aaaatgaaaa acttgtgaac aaacaaaaca aaacaaaaat 1561 cgaatattat tttagtcttt gtttaaaagg gaaaaacaaa aatatttcta agggatttta 1621 ttttgcacac ctactccaac tctataccac aaaaatgtat agcttaccga agttaataac 1681 ggcgctgttc tcaaccttct actgtgtgct gtactcgcac agctttaatc tggaaaaccg 1741 cctgcccatt gttaaattca atgcgaatcc ctcatcatat tttgggtatt cagtagcaac 1801 acacatcgtt ggcgaatata attggccaaa taatacaaaa tggcttcttg ttggcgctcc 1861 tttggataag aatctacaac caggcaccaa taaaacgggt gctctctaca aatgccctat 1921 aacgcaaaat ttcaacgact gcgaacaggt tataacggat ggtagaagat cctacgacag 1981 cgatgatatt gaagagcttg cagaaccctc agacgatgaa ataaaagagg atcaatggtt 2041 gggtgtcact gtacgaagtc agggcttagg cggcaaggtt ttagtctgcg cccatcgcta 2101 cataaccaag gtacgcgaaa atcgttatgg ccaaggtctc tgctatgtgt taaccaacga 2161 attaagttac gatgaagttt atgagccatg taaaggccgc accgtccaaa gagcccacga 2221 agattatggc ttttgtcagg tgggcacctc tgctgccttg ttcgatgaca acaccatggt 2281 gttgggcacc cctggcccct atacatggcg tggcacggtt tttgtcaccg agattggcgg 2341 tgaatatttg gagcgtgata agaacatgta ttatggagat cattcggata gctcttcacc 2401 agtggacaaa tacagttatt tgggcatggc tgttacgggg ggcagatact ttggagaacg 2461 catgtcttat gctgccggtg ctcctcgctc caatggtcat ggccaggtgg ttatctttga 2521 caaggataat cgcaatccca tacccgtgca catgatcatc gagggtgaac agtttgcctc 2581 aagttttggt tatgagctga ccacagccga tataaatggt gaccagaaac cagatctcat 2641 tgtagcggcc cccttctatt tcaacaaaac cgagggagga gctgtgtaca tctatcaaaa 2701 tgtcaatgat atgctgccct ataaggccac cctgaagttg acgggtacct ttgaaagtcg 2761 ttttggcttg gctctggcca acattggtga tataaacaag gatcattgcg atgatttggc 2821 cataggagcc ccctatgaag atgacggagt ggtctacatt tatctaggca atcgagtagg 2881 tttaaattcg aaaccctccc aaagaataca ggcctcagat ttggggctaa tgtcacgacc 2941 cataaggact tttggcagct ccataacggg aggagctgat ttggatggca attcctacac 3001 cgatgtggtg gtgggagctt atgcctcttc tgccgttgta gccctgctct ctcgccccat 3061 cataagcata caaaccaaat ggagaagtaa agagcttagg aatattgatc ccaccaagag 3121 cggttgtgtc gctgatgtct tcaccaacat gacatgtttc acctttgagg cctgttgctc 3181 catagatccg tatgaggaga ctgccgccaa tcaggatttg aaattgatgt ataccgtgga 3241 ggctgaaact tttgcatcca acaagaaatt ctctcgtgtc ttttttgatc gcgaaaataa 3301 acgcagcaat gtggtgaaac gcgaggtaac tgtgagaacc gatgggcgcc ttgcgtgtaa 3361 tcaagttacc ggctacatta aggagaatac gcgtgacatt caaagtccca ttaaatttaa 3421 actgaactac acgttggtgg aaacgaaatt gcccgactct ggcctcaaag gtttaaatcc 3481 catattggat caaacgcagg cgaatattga atttgagggt accttccaga aggattgtgg 3541 agaggatgat gtctgcgata gcaatttgat actgagtgcg gagctggact tgaacttgga 3601 gaacgaaaac tatgccttgg tcttgggaga acaggaagaa attcgcatta atgtcaatgt 3661 atcgaatagt gcagattctg cctacgaaac tcaactattt atagtacatc agaagagtgt 3721 atcttatata gcagccatta aaacgagcac tgctatatgc agtcgcttta atgaaactgt 3781 ggttgcttgc ggcctgggca atcctatgcg ccgcggtaca tctgcccaag tctcagtgcg 3841 attcgatccc agcggtctgg agttggaaga gagtaaattg actttcaata tatttgccaa 3901 taccacatcg aaattaattg gagccaaaaa gccacaaaag aaattagatg tcagagttat 3961 aaagagggct gaattaagtc tacaaggttg ggctagacct gaacagagct tctatagcgg 4021 tgaaatgaaa ttggagagca cgaagatgca aatggaagat gtgggctcac aagtgctgca 4081 tacttatcag atctacaacg aaggcccttg gaaagcaccc aaagtacaat tgaccatcta 4141 ctggccgtac caggtataca gtgaaaagga taaacgcgac aaatggctat tgtatttgga 4201 ggaaatcccc attatcgata atgtacgaca aggacaatgt tttgtctcct ccgaatatgt 4261 gaatcccctt aatctaacaa caaaagcgaa aaacaaaccc aatttggagg atattctttc 4321 ggcaccggcc tcctatatga tgaaaccttt gaataagaca caatttgccc atcgcaccca 4381 tatggaaaaa tccagctata gcagtagcaa acaagaaatc atcggcgaag atttttcttc 4441 ttcatccact acagcaggtt ttctgaatcg cttacgccgc gataccttaa cacgcatcat 4501 aaggccggaa cgttttatgg atatgcgtgg agatcataaa aataagaaac gtgacattgt 4561 agaattggat tgtacaaagg ccacagcgag ttgtattaag atacaatgtg atatttacaa 4621 tatgccagcg aatacagaag catatgtaca tgttaaggca cgtttgtgga attcaacact 4681 gatgtcggaa catgccagag ccgatgcggt gagaataata tcgacagcgc atgtgcaaat 4741 accaccagaa tttagtgtgg aacaattgca aacagccgaa cctttaacgg tggaaactcg 4801 tgcatatcct gaattgatag gtcaacaacg tgatacagcc acaccgctgt ggattattat 4861 cttggccatt attggcggac tactgctgct ggccttcttc accactgcca tgtggaagtg 4921 tggcttcttc aagagacgga ggccggatcc gacgttaagt ggcaatttag aaaagatgaa 4981 tgaggagaaa cccttcctaa atgcgcagaa aaataatcat cgcgttttct aacaagaagg 5041 gactgttggg tgggatctta tgcaacagca acaaatgcga cagccaacgg ctaagccacc 5101 aaaagtttgc tgtggcgata gtgcaactaa tagtgatact tatgattact ggcaagcgtt 5161 tcaacagaac aacaacaaca acaataataa tagcaacaac aataataata attacaataa 5221 caactataat agttataata tgaacaatga ggcctgcgtt atagactggg gctctctgta 5281 ggggccaaac tagtgaaaca acatcaaaaa aaaaaaacaa gtataagcgt gctaagttcg 5341 gtcgggccga atcttatata ccctccacca tggatcgcat ttgtcgattt cttttcccgg 5401 cat