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PREDICTED: Stomoxys calcitrans mucin-2 (LOC106084413), transcript


LOCUS       XM_059366672            6194 bp    mRNA    linear   INV 02-SEP-2023
            variant X6, mRNA.
ACCESSION   XM_059366672
VERSION     XM_059366672.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6194
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..6194
                     /gene="LOC106084413"
                     /note="mucin-2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 Proteins"
                     /db_xref="GeneID:106084413"
     CDS             28..4914
                     /gene="LOC106084413"
                     /codon_start=1
                     /product="uncharacterized protein LOC106084413 isoform X2"
                     /protein_id="XP_059222655.1"
                     /db_xref="GeneID:106084413"
                     /translation="MLFAAFQRHKSFSSDGSKLRYYQPAGPLISAHVIQPVTAGPQPI
                     PPNVPLLPTTNTKLKTLSTNAEGESTSLSANTGTAEGPDTELLLTGGDLTPYRYPPHN
                     GNGSGSAAAAAAAHHSQQQQHQLHQQAAAHAAAAAAAAAAAAHQSSPYPRSIHTPMHY
                     STPYPSNYYSPYPSEPVCYSPPAYQPYFPTKVYQSAPPPSHHSAYRRYPYYPPGHPPP
                     PADLYEQSPPPPSTAGPTGPPPVTGPPPPSQAGQHPSSTAPGGNQLVPTGPSGHSQHL
                     EHYSGPPGYYPGYGTGGAAAGQCYTRSIQAPYMEYPPQCPCPMQQSCPKNVHTGPHIG
                     SNSINRTHNASSNNNSSSNNSTLANLSGNTTTITTNSSATIVNHCNSNSKCSNLNVST
                     SMQHNSSNKPTMSDTSTVNNSSSNRNNNNSITATMILNANNKHNNSNNSEVNSNRGPV
                     KNLKNATETQIETSNKHVNDNVPLLSVKTELSSDDTDNKSQYEENVVTPPTPPGAFST
                     NEDKLKDSSDKDTAIQDVEESTDKLQTTNAMTVASPTPIEAYDLTTTTPPLAASAGSA
                     AMPPVKNSTQSTQHTMTVGRRARIGKSMAWNMVYAGAATHPTAANPVPTNLSNPALPT
                     QACLPGRTGSQPVSPLHIATSPTSTATVASTVLRRPTATHSDHGSTSPEHNVNGLLGK
                     TPTPTTFFVNNVITKQEIVEVQAPLLLKAEIKSEKIKLEDDILDTMLLQHSNVAQHQS
                     HGCQQSPQKHIIPEKNELKIIKAEPITLSEILHESKVKIEQDCEILTPSVSKDSPLEQ
                     RPERRTELLVPKTQGRMRLLPSWQQPIHATPPPLPAVNCDIDLSTTSDDEVLDLCHSP
                     VTGCSSSSASQPNSGKRMKILEFNKNQCKKSPPNSYKSLIKQAEPKMYLCLSRKFEKK
                     SRSGRIHSFKSNKGSALNNGMRRRELLLTDQQKESLRLRKKKLAAMEKRRRESKELKR
                     SELRLKRKCTKESKTTNTDKLSIKGENSELEDIKHNCGKVKAEHDVIDLVEDEEVDEL
                     VKNKDNDGIALKEVSVATNKEDIVVGRVPTASPKPSPKRGKPPKKPAIPMHLIETIDA
                     VARGYFSEPECRTACSPGPSDLHRINTSTEEKETSRKPLALKMQKKTKTTLEKRSKSE
                     TKKPLNAHTDILTSGCLIREQLARPLLDTAQSLTTSKSMEKLSTPTGVALDGGVSLEM
                     ASGENIQKSATKVRTKETKPNIIREKKQKKCTQLFKKSKAPAEANTMVKDSILIKENQ
                     LSGLSLEANNNGYHLEKPKEAQNLPEKSDNLLVESTKSAENLLSFLPGAVENSTNFTF
                     NAQTPPSILLMDPLVFNATGATSSNIVAPASASPTPLQSQHSNGTIQPATTPVFLPPM
                     PRVVCHSHHQHGVKRNRSRSKFGSRKRQKLKHSTVSFEVDETLPPAPRMDVVPKWNNG
                     WTWEGKQFQGAVFLNSDDPLVIRTCYPAMRHLEGDIIRTRDCVLLKANEDNELPYVAK
                     VAHLWENPEDGEMMMSLLWYYRPEHTEQGRQLCDSPDEVYASRHRDHNSVACVEDKCY
                     VLTFSEYCRYRRRLRAAEEDIEDVNIVPKRPNYYSIRIVPDNTNPELVMFCRRAYEFR
                     TRRLLKMPNKQDYYVVNS"
ORIGIN      
        1 taagattggt gagcaattgg tctacgcatg ctttttgcgg ctttccagag acataagtca
       61 ttttcttctg atggttccaa gttacgttat tatcaaccag ctggtccatt gatctcagcg
      121 catgtcatac agccagttac agctggacca cagccaatac caccaaatgt gccattgtta
      181 cccaccacta atacaaagct taagacccta tcaacaaatg ccgaaggtga aagcacgtcg
      241 ctctcggcaa atactggaac ggccgaaggt cctgatacag aactcctgct caccggcggc
      301 gatctgacac cctatcgtta tccgccccat aatggaaatg gaagtggctc agcagcagcc
      361 gcagccgcag cacatcatag tcaacaacaa cagcatcaac tgcatcaaca agcagcagca
      421 catgcagcag cagctgcagc tgcagcagct gctgccgctc atcaaagctc accgtatccc
      481 cgatccatcc atactcccat gcactactca acgccatatc cttcgaatta ctattcacca
      541 taccccagtg aaccagtgtg ttattcgcct cctgcctatc aaccgtattt ccccactaaa
      601 gtctatcaaa gtgccccgcc accatctcat cattcggcct ataggcgtta tccctactat
      661 ccgccaggac atccgccacc gccggcagat ttgtacgagc aatcaccgcc accaccatca
      721 accgcaggtc caaccggacc gccaccagtt acaggcccac cgcctccgtc acaggccggt
      781 caacacccat cttcgacagc accaggggga aaccagcttg tgccaaccgg cccttctgga
      841 cacagtcaac atttggagca ttattctggg ccgccgggct actatccagg ctatggtacg
      901 ggcggtgcag cagcaggtca atgctataca cgcagtattc aggctccgta tatggaatat
      961 ccgccacaat gcccatgtcc aatgcaacag tcgtgtccaa aaaacgtcca tactgggcct
     1021 catattggta gcaacagcat caatcgcact cacaacgcca gcagcaacaa caacagcagc
     1081 agcaacaaca gtacattagc caatctcagc ggcaatacca ccaccatcac caccaactca
     1141 tcagcaacaa tagtcaatca ttgcaacagc aacagcaagt gcagcaattt gaatgtctcg
     1201 acttcaatgc agcacaacag cagcaacaaa ccgacgatga gcgatacgag tacggtgaac
     1261 aacagcagca gcaaccgcaa taacaacaac agtataacag cgacgatgat attgaatgcc
     1321 aataacaagc acaacaacag caataacagc gaagtgaatt ccaatagagg cccagtaaaa
     1381 aatctaaaaa atgcaaccga aacacaaatc gaaacatcca acaaacatgt caacgacaat
     1441 gtacccctct tatcggtcaa aactgaatta tcctccgacg acacagacaa caaaagccag
     1501 tatgaagaaa atgtggtcac acccccaact cccccaggcg ccttcagcac aaacgaggat
     1561 aagcttaagg actcgtcgga caaagatact gccatacagg atgtggagga gagcacagat
     1621 aagttgcaaa caactaatgc gatgaccgtt gctagcccca cacctataga ggcttacgat
     1681 ttgacaacta ccacacctcc tctggcggcc agtgcgggaa gtgcagcgat gccacctgtc
     1741 aagaacagta cacaatccac acaacacaca atgacagtgg gtagaagagc ccgcataggt
     1801 aaatcaatgg cttggaatat ggtctatgct ggtgctgcaa cccaccccac cgctgcgaat
     1861 ccagttccca caaatttgtc aaatccggct ttgccaacgc aagcgtgttt accaggacga
     1921 actggctctc agcccgtatc tcctttgcat atcgcaacct cgcctacttc tacggcgaca
     1981 gtagcttcca ccgtcctaag gcgtcccaca gcgacccact ctgaccatgg atcaacctcg
     2041 cctgagcata atgtcaatgg cctgttgggc aaaacaccga ctcctaccac attttttgtc
     2101 aataatgtca taaccaaaca ggagatcgtt gaagtacaag caccactgct gctgaaggcc
     2161 gaaatcaaat cggagaaaat aaaactcgaa gacgatatac tcgatacaat gttgcttcaa
     2221 cacagcaacg tagcgcaaca ccagtcgcac ggatgccaac aatctccgca gaaacatatc
     2281 ataccagaga aaaatgagct taaaatcata aaagctgagc ccataacact cagcgaaatt
     2341 ttgcacgaaa gcaaggtaaa gatcgagcag gactgtgaaa ttctcacacc atccgtatct
     2401 aaagacagcc ccctggagca gaggccggaa agacggacag aactgctagt gccgaagacg
     2461 cagggtagaa tgcgattgct cccttcatgg caacagccaa tacatgccac acccccaccc
     2521 cttccggcgg ttaattgtga tattgactta tcgactacgt ccgacgacga agtgctcgat
     2581 ttgtgtcaca gtcctgtcac tgggtgctcc tcatcctccg catctcagcc caactcaggg
     2641 aaacgtatga agattttgga attcaacaaa aaccaatgta aaaaatctcc tcccaatagc
     2701 tacaagagtc tcatcaagca ggctgagccc aaaatgtatc tctgcctgag ccgtaaattc
     2761 gaaaagaaat cgcgaagcgg tagaattcac tctttcaaat cgaacaaggg cagtgccctt
     2821 aataatggca tgcgcagaag ggaacttctg ctaaccgatc aacaaaagga gagtctacga
     2881 ctaaggaaga agaaattggc agctatggaa aaacgtcgca gggagtctaa agaacttaag
     2941 agatcggaat taaggctaaa acgaaagtgc accaaggaat ccaagacgac gaacactgat
     3001 aaactaagta ttaagggcga aaattctgag cttgaggaca tcaagcataa ctgtggcaaa
     3061 gtgaaagcag aacacgatgt catagatttg gtggaagatg aagaagtgga tgagttagtg
     3121 aagaataagg acaatgatgg gattgcattg aaagaagtct cggtggcaac taataaagaa
     3181 gatattgtcg ttggtagagt tcccactgcc tctccgaaac cttcccccaa gcgcggcaaa
     3241 ccaccaaaga aaccagctat acccatgcat ttaattgaaa ctatagacgc tgtggcccga
     3301 ggctacttct ccgagcccga gtgtcgcaca gcatgttctc caggaccatc agatttacac
     3361 aggatcaaca caagcacaga ggaaaaggaa acatctcgga aacctctggc cctcaagatg
     3421 cagaagaaga ccaaaaccac tttggagaaa agatccaagt cagaaactaa gaagccactt
     3481 aatgcacata ccgatatctt gacaagtggt tgccttattc gagaacaact ggctcgacca
     3541 ttgctagaca cagctcaatc attaactacc tcaaaatcaa tggaaaaact aagtactcct
     3601 acaggggtag ccttagatgg aggggtctcc ctggagatgg cttcagggga gaacatacag
     3661 aagtcggcga ctaaagttcg cacaaaagaa acaaaaccga atattattcg ggagaagaag
     3721 caaaagaagt gcacacaact tttcaaaaaa tcaaaagctc cagcggaggc caataccatg
     3781 gtcaaggact caatacttat caaggaaaac cagttatccg gtttgagctt ggaagcaaat
     3841 aacaatggat atcatttgga gaagccaaaa gaagcccaaa atctcccaga aaaaagcgat
     3901 aacctccttg tagagtcaac aaaatcagct gagaacctgt tgtcattcct acctggcgcc
     3961 gtggagaact ccactaactt tacatttaac gctcaaactc caccatccat attgctaatg
     4021 gatcctcttg tttttaatgc aacaggagcc accagcagca acattgttgc acctgcatca
     4081 gcatcaccaa caccgttaca gtcacaacat tccaatggta ctattcaacc tgcaactacg
     4141 ccggtattcc tacctcctat gcctcgtgtg gtctgccact cgcaccatca acatggagtc
     4201 aagcgcaatc gatcacgttc caaatttggc agtcgaaagc ggcaaaagtt aaaacattcc
     4261 acggtgtcat ttgaagttga cgaaacactg ccgccagctc cgcgtatgga tgttgtgcca
     4321 aaatggaaca atggctggac ttgggagggt aaacaattcc agggtgctgt ctttttgaat
     4381 agcgatgatc cattggttat acgaacttgt tatcctgcta tgcgccattt ggagggagac
     4441 attatacgca cccgcgactg tgtccttcta aaggccaatg aagataacga gttgccttat
     4501 gtggccaagg tggcccacct ctgggaaaac cctgaagacg gtgaaatgat gatgtctctc
     4561 ttgtggtact atcgtcctga acacaccgaa caaggccgtc agttatgcga tagccctgac
     4621 gaagtatacg cctcgcgcca tcgagatcac aattcagtgg cctgcgttga agataaatgt
     4681 tatgtcttga cctttagtga atactgcaga tatcgccgaa gacttcgagc agctgaagag
     4741 gatatcgaag atgttaacat tgtaccgaaa cgacccaatt actacagtat acgcatagtg
     4801 cccgacaata ccaatcccga gttggttatg ttctgccgca gggcctatga attccgaact
     4861 agacgtcttc tgaagatgcc aaacaaacag gattattatg tggtgaactc ctaaagcaca
     4921 catcgcagct atggttccaa cacaaatgat aaatgcatgg gaaactttaa tgaaaagaga
     4981 tgatcgacga ttgacgatcg tatggcatgc atacgacaaa atggcatgga catgaattgt
     5041 taaggccttt tagtaaacat taaacaattg ttaacgatac ttgtttttat tatattttcg
     5101 tgacaaatta aacaaaaaca aaaattaaaa caaaaaatcc tttagaaatg ccatttcgcc
     5161 tagaagctct atatgatttg taaactttcc ggatatctaa atctaaaaca cacacttgaa
     5221 aggaacaacc ttattatact aaaactaaag gaaaacatag ctactaatat acacatatac
     5281 aaaccgataa aacaaacaag catacatcgt acatcataca tcaacatact atatagtatt
     5341 agtaacaaca tcggagagaa aagaaaactt tacacaaaat ttaaccaaaa tatttaggca
     5401 taaattaata tttaacacac acacacacat accatagaca aacaactatg caaatttgaa
     5461 gttgtattta tgttttctaa cttatatata gttttattaa gcgaaacaaa cgaaacccgt
     5521 gctgaagatg aattatttct agaactcttt tttgtgtttg tatatttttt aatgttaagc
     5581 ctttaatgga aattctaatt tcatttaatg gcaactccca tttaagttta aaaattttat
     5641 tttttttttt tggaaaccag accaaattgt tttataaaca aaaaaaacac aaaattattt
     5701 tgcaagaaca caaacaaaaa caatgattta aaaaatcgaa actatattca tttaaaaact
     5761 attttaaatt tataaaacga ttcttaaaaa tattttaaaa acaaaacacc cttaaagaac
     5821 gactactttc gctcatcaat gcgtgaatag attttgcaaa aacaaaacta aatgtatgaa
     5881 atcatgtaca tcatctgcat ccattttatg acattgtatt tgtaacattt cgctctaaaa
     5941 cattatttaa tatatttatt tatccctgag cttaaaccaa gcacttgagt agtttaaatt
     6001 ttaattgttt taatttggaa acctatttac atacataata cacacacaca cacagacaca
     6061 cattgacaca aaaaatatat aaatacttat tagaaatgca tacattattt tatttattca
     6121 attcttatat gatttttgat atatataaat atatgtataa acatccccat acatgtgaaa
     6181 tatttttgat aatt