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LOCUS XM_059366670 9535 bp mRNA linear INV 02-SEP-2023 variant X4, mRNA. ACCESSION XM_059366670 VERSION XM_059366670.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9535 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9535 /gene="LOC106084413" /note="mucin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106084413" CDS 2231..8254 /gene="LOC106084413" /codon_start=1 /product="mucin-2 isoform X1" /protein_id="XP_059222653.1" /db_xref="GeneID:106084413" /translation="MKNCERCQDTTTNNKLSLTTATPIATTGSTIATAIETMKPLKTT NKSATKLSDGGGGGGGLVVGGKELVINTTDMIKAIRYSKATVATSTNSTSGGASLTIT TTATMPTGVLPLTTVVASPLCQHLLQQQHQQHNPQRCSSVGSTTSSICETVSSDSGLA MSPTEPQHHHNHHNLHHQQILQQTHQQQPTHALAHPHHLNSESYQQQQHLLHHHNMAS LSLAAVAPPATTTKMNRSLLPSNGTNGLTSGLSTTTRLSPHTQPQPHQQTTHGLLPSV VSSSTSSLLAVAPQPVALASSTPSRLSATHPAMATVVPPHSIADSQTAAASAPTPSQP QQQQHTPLQPQPPPPPPAATTLPPLVGGLGAAAMAANLAESFSLLHQQAHHFRDILYA AHLLGRGYYQPAGPLISAHVIQPVTAGPQPIPPNVPLLPTTNTKLKTLSTNAEGESTS LSANTGTAEGPDTELLLTGGDLTPYRYPPHNGNGSGSAAAAAAAHHSQQQQHQLHQQA AAHAAAAAAAAAAAAHQSSPYPRSIHTPMHYSTPYPSNYYSPYPSEPVCYSPPAYQPY FPTKVYQSAPPPSHHSAYRRYPYYPPGHPPPPADLYEQSPPPPSTAGPTGPPPVTGPP PPSQAGQHPSSTAPGGNQLVPTGPSGHSQHLEHYSGPPGYYPGYGTGGAAAGQCYTRS IQAPYMEYPPQCPCPMQQSCPKNVHTGPHIGSNSINRTHNASSNNNSSSNNSTLANLS GNTTTITTNSSATIVNHCNSNSKCSNLNVSTSMQHNSSNKPTMSDTSTVNNSSSNRNN NNSITATMILNANNKHNNSNNSEVNSNRGPVKNLKNATETQIETSNKHVNDNVPLLSV KTELSSDDTDNKSQYEENVVTPPTPPGAFSTNEDKLKDSSDKDTAIQDVEESTDKLQT TNAMTVASPTPIEAYDLTTTTPPLAASAGSAAMPPVKNSTQSTQHTMTVGRRARIGKS MAWNMVYAGAATHPTAANPVPTNLSNPALPTQACLPGRTGSQPVSPLHIATSPTSTAT VASTVLRRPTATHSDHGSTSPEHNVNGLLGKTPTPTTFFVNNVITKQEIVEVQAPLLL KAEIKSEKIKLEDDILDTMLLQHSNVAQHQSHGCQQSPQKHIIPEKNELKIIKAEPIT LSEILHESKVKIEQDCEILTPSVSKDSPLEQRPERRTELLVPKTQGRMRLLPSWQQPI HATPPPLPAVNCDIDLSTTSDDEVLDLCHSPVTGCSSSSASQPNSGKRMKILEFNKNQ CKKSPPNSYKSLIKQAEPKMYLCLSRKFEKKSRSGRIHSFKSNKGSALNNGMRRRELL LTDQQKESLRLRKKKLAAMEKRRRESKELKRSELRLKRKCTKESKTTNTDKLSIKGEN SELEDIKHNCGKVKAEHDVIDLVEDEEVDELVKNKDNDGIALKEVSVATNKEDIVVGR VPTASPKPSPKRGKPPKKPAIPMHLIETIDAVARGYFSEPECRTACSPGPSDLHRINT STEEKETSRKPLALKMQKKTKTTLEKRSKSETKKPLNAHTDILTSGCLIREQLARPLL DTAQSLTTSKSMEKLSTPTGVALDGGVSLEMASGENIQKSATKVRTKETKPNIIREKK QKKCTQLFKKSKAPAEANTMVKDSILIKENQLSGLSLEANNNGYHLEKPKEAQNLPEK SDNLLVESTKSAENLLSFLPGAVENSTNFTFNAQTPPSILLMDPLVFNATGATSSNIV APASASPTPLQSQHSNGTIQPATTPVFLPPMPRVVCHSHHQHGVKRNRSRSKFGSRKR QKLKHSTVSFEVDETLPPAPRMDVVPKWNNGWTWEGKQFQGAVFLNSDDPLVIRTCYP AMRHLEGDIIRTRDCVLLKANEDNELPYVAKVAHLWENPEDGEMMMSLLWYYRPEHTE QGRQLCDSPDEVYASRHRDHNSVACVEDKCYVLTFSEYCRYRRRLRAAEEDIEDVNIV PKRPNYYSIRIVPDNTNPELVMFCRRAYEFRTRRLLKMPNKQDYYVVNS" ORIGIN 1 tttacaaaaa tattttcttt agaaaaatgt taattaggat cttgtcttta atttaattaa 61 aatttaatta aaagttcgcc tttagaaaaa attgttgtga aattttgtct ttaaaaaatc 121 atttcgaggg gggttcggcc ctgcctgtag ttttgtcatt agagagtgtt ccgctgaaat 181 tttgtcttaa gaaaagattt tattataatt ttgtttttaa taaagatttt tttttacaat 241 tttgtcctta agaaaaataa tttttgaggc ggtcgtggcc tggcctatat ttgtctttat 301 agaatactat caatataaaa ttttcaagtt tcggtctttc atgttgcagg atggggctat 361 attcattccc actacagaaa cttttgtatt ttagctcgtt taattatatc aatatagtca 421 tacagttcgt ggtacatgcg acaccattcg ctgattttat tcattcataa tccttctttc 481 aaatacacca agttccgagc tttgatacct accaattcta gttgccatac ccacttaaac 541 tgaatgcctc ggtcttccac gctgtggcaa atctgcacct tccgtttaaa gttttttaaa 601 aatgcttcaa ccaaattgac cgaatttggc atatgaggtt ctcagtgaaa taaattttcc 661 tgcaggaaat tgattactta cgtggacgtt ctggctttct aactattaaa tggccagtac 721 tggtatatgg gcgctgtact aatatcacga cctgcagtga aaaattttcc aataagtttt 781 ttatcatttt cgttcattgt cgactattgc gctgactgac aatacgatta taaaaaaaat 841 gctgctaaca ttttgaactt gtttgtaatg tcatggatat gtgaattggt ctcttattga 901 gaaaatacct aaatacacca caccattcat tgcgactcac tgccacatga acagcaaaac 961 gcctcaacac aaccctgaaa tgcgaaacac cacgaacgct cagtgctcac caaattatgc 1021 caaacaaaat aaaagagaat aatccaacaa gaccattaaa attttcttag ccaatacaag 1081 aaatagcaga atagcagaga tgttagtgga cacaaaaaga gcgatttctt cacctttccc 1141 aatacgaagg agattatctc ttgtgctgat agcacaccat accaagtgtg acaccactac 1201 aggcctctca attggagaac agagagatac aacaaaatga gaaaaactca cggataccga 1261 tttcaagcgt ttcttatgga atcttctatg gccgaaatgg tttagtattg ctctacctgt 1321 cgtctcgtta acaacaactt aacaatagga acggtcgtgt gtgacgttga tttttagtgc 1381 tctcagcaaa aaaaaagaaa ataaatgtga aacaaaaaga agaaaacgag caaaatttga 1441 ataaaaacga tatatatctt tttgtttttg tttccctttt gagttgtcct taaggtgttg 1501 tggtttacca ctgagcacta tatcatacaa aaaataaatc gttttaaaaa catccacaat 1561 agtagtgaag tgttttatga aaaaacgact acagcaaagt gaaaatacta atatgtcgcc 1621 aagaaaaaat cataatttgt ctaatatttt aactataaac caagtgtatt aaatattcgt 1681 aacagattaa aatcgagtta caccgccaaa aattagagaa atttaaaaaa gtgcttaata 1741 ttcataattg agaataatga gaggagatta gctgtaataa atctaataat ggaataaatc 1801 attataaggt gtagccaact aaaggaaaac tatcaattaa tcaaaacttc gttgccaaaa 1861 caatgtaaaa caaaaacaat aacatacaaa actttattaa tgataaacga tcataattaa 1921 actaagatgc cttaaaacaa tacttccttg ttataaaacc aacaacataa aaccccaaaa 1981 acaaacaatt accacaaatc tatattttat tacaaaacaa acatttgttg agaacctaaa 2041 gttaacgtta aacaagcaaa aaccaaaaac agtaatagaa acaaaacaaa caaacaacaa 2101 ctccatcgag attaactaac gaaacaacta aacagccgac cagcaagcaa gcaagcaagc 2161 gaacaaagcg ctggacccaa cattttatta atggctaata ataacaatcg tcgtcgtttt 2221 catttgaaat atgaaaaact gtgaacgttg tcaagacacc accacaaaca ataaattatc 2281 attaacaaca gcaacaccca tagcaaccac aggctccaca atagcaacag ccattgaaac 2341 catgaaacca cttaaaacaa caaacaaatc tgcaacaaaa ctcagcgatg gaggtggggg 2401 tggcggtggg ttagtggtag gtggcaaaga gctggtaatt aataccacag atatgataaa 2461 agccatacgt tacagtaaag ccacagtggc caccagcacc aactcgacca gcggcggcgc 2521 cagcctaacc ataacaacaa cggcaacaat gccaacaggt gtactaccac taacaacagt 2581 tgtagccagt ccgttgtgtc aacatctatt acaacaacaa catcaacaac acaatccaca 2641 gcgttgttcg agtgttggca gcacgacgag cagtatctgt gaaacggtgt catccgattc 2701 gggtctggcg atgtcgccaa cggagccgca acatcatcat aatcaccata acctccacca 2761 ccagcaaata ttgcaacaaa cgcatcaaca acagccaact cacgctctcg cacatcccca 2821 ccacttaaac tctgagtcgt atcagcagca gcaacatcta ctgcatcatc ataacatggc 2881 ctcgttatct ttggcggcag tggcgccacc agcaacgaca accaagatga atcgtagcct 2941 attgccatca aatggaacca acggcctaac ctcgggcctg tcaacaacaa cacgtctgtc 3001 gcctcatacc caaccgcaac cacatcagca gacaacacat ggtttattgc ctagtgttgt 3061 ttcgtcttca acatcatcat tgttggccgt agcaccacag cctgtggcat tagcatcatc 3121 aacaccaagc agattatccg ctacacatcc ggcgatggcg accgtggtgc ccccacactc 3181 tatagcagat tcgcaaacag cggcagcatc agcgccaacg ccatcacaac cacagcagca 3241 acagcatacg cccctacaac cacaaccacc gccaccacca cctgccgcca caacattgcc 3301 acccctggtg ggtggtttag gtgctgctgc aatggcagct aatttggccg agtccttttc 3361 gttgttacac cagcaggcgc atcattttcg agatattctc tatgcggcgc atttactggg 3421 tcgaggttat tatcaaccag ctggtccatt gatctcagcg catgtcatac agccagttac 3481 agctggacca cagccaatac caccaaatgt gccattgtta cccaccacta atacaaagct 3541 taagacccta tcaacaaatg ccgaaggtga aagcacgtcg ctctcggcaa atactggaac 3601 ggccgaaggt cctgatacag aactcctgct caccggcggc gatctgacac cctatcgtta 3661 tccgccccat aatggaaatg gaagtggctc agcagcagcc gcagccgcag cacatcatag 3721 tcaacaacaa cagcatcaac tgcatcaaca agcagcagca catgcagcag cagctgcagc 3781 tgcagcagct gctgccgctc atcaaagctc accgtatccc cgatccatcc atactcccat 3841 gcactactca acgccatatc cttcgaatta ctattcacca taccccagtg aaccagtgtg 3901 ttattcgcct cctgcctatc aaccgtattt ccccactaaa gtctatcaaa gtgccccgcc 3961 accatctcat cattcggcct ataggcgtta tccctactat ccgccaggac atccgccacc 4021 gccggcagat ttgtacgagc aatcaccgcc accaccatca accgcaggtc caaccggacc 4081 gccaccagtt acaggcccac cgcctccgtc acaggccggt caacacccat cttcgacagc 4141 accaggggga aaccagcttg tgccaaccgg cccttctgga cacagtcaac atttggagca 4201 ttattctggg ccgccgggct actatccagg ctatggtacg ggcggtgcag cagcaggtca 4261 atgctataca cgcagtattc aggctccgta tatggaatat ccgccacaat gcccatgtcc 4321 aatgcaacag tcgtgtccaa aaaacgtcca tactgggcct catattggta gcaacagcat 4381 caatcgcact cacaacgcca gcagcaacaa caacagcagc agcaacaaca gtacattagc 4441 caatctcagc ggcaatacca ccaccatcac caccaactca tcagcaacaa tagtcaatca 4501 ttgcaacagc aacagcaagt gcagcaattt gaatgtctcg acttcaatgc agcacaacag 4561 cagcaacaaa ccgacgatga gcgatacgag tacggtgaac aacagcagca gcaaccgcaa 4621 taacaacaac agtataacag cgacgatgat attgaatgcc aataacaagc acaacaacag 4681 caataacagc gaagtgaatt ccaatagagg cccagtaaaa aatctaaaaa atgcaaccga 4741 aacacaaatc gaaacatcca acaaacatgt caacgacaat gtacccctct tatcggtcaa 4801 aactgaatta tcctccgacg acacagacaa caaaagccag tatgaagaaa atgtggtcac 4861 acccccaact cccccaggcg ccttcagcac aaacgaggat aagcttaagg actcgtcgga 4921 caaagatact gccatacagg atgtggagga gagcacagat aagttgcaaa caactaatgc 4981 gatgaccgtt gctagcccca cacctataga ggcttacgat ttgacaacta ccacacctcc 5041 tctggcggcc agtgcgggaa gtgcagcgat gccacctgtc aagaacagta cacaatccac 5101 acaacacaca atgacagtgg gtagaagagc ccgcataggt aaatcaatgg cttggaatat 5161 ggtctatgct ggtgctgcaa cccaccccac cgctgcgaat ccagttccca caaatttgtc 5221 aaatccggct ttgccaacgc aagcgtgttt accaggacga actggctctc agcccgtatc 5281 tcctttgcat atcgcaacct cgcctacttc tacggcgaca gtagcttcca ccgtcctaag 5341 gcgtcccaca gcgacccact ctgaccatgg atcaacctcg cctgagcata atgtcaatgg 5401 cctgttgggc aaaacaccga ctcctaccac attttttgtc aataatgtca taaccaaaca 5461 ggagatcgtt gaagtacaag caccactgct gctgaaggcc gaaatcaaat cggagaaaat 5521 aaaactcgaa gacgatatac tcgatacaat gttgcttcaa cacagcaacg tagcgcaaca 5581 ccagtcgcac ggatgccaac aatctccgca gaaacatatc ataccagaga aaaatgagct 5641 taaaatcata aaagctgagc ccataacact cagcgaaatt ttgcacgaaa gcaaggtaaa 5701 gatcgagcag gactgtgaaa ttctcacacc atccgtatct aaagacagcc ccctggagca 5761 gaggccggaa agacggacag aactgctagt gccgaagacg cagggtagaa tgcgattgct 5821 cccttcatgg caacagccaa tacatgccac acccccaccc cttccggcgg ttaattgtga 5881 tattgactta tcgactacgt ccgacgacga agtgctcgat ttgtgtcaca gtcctgtcac 5941 tgggtgctcc tcatcctccg catctcagcc caactcaggg aaacgtatga agattttgga 6001 attcaacaaa aaccaatgta aaaaatctcc tcccaatagc tacaagagtc tcatcaagca 6061 ggctgagccc aaaatgtatc tctgcctgag ccgtaaattc gaaaagaaat cgcgaagcgg 6121 tagaattcac tctttcaaat cgaacaaggg cagtgccctt aataatggca tgcgcagaag 6181 ggaacttctg ctaaccgatc aacaaaagga gagtctacga ctaaggaaga agaaattggc 6241 agctatggaa aaacgtcgca gggagtctaa agaacttaag agatcggaat taaggctaaa 6301 acgaaagtgc accaaggaat ccaagacgac gaacactgat aaactaagta ttaagggcga 6361 aaattctgag cttgaggaca tcaagcataa ctgtggcaaa gtgaaagcag aacacgatgt 6421 catagatttg gtggaagatg aagaagtgga tgagttagtg aagaataagg acaatgatgg 6481 gattgcattg aaagaagtct cggtggcaac taataaagaa gatattgtcg ttggtagagt 6541 tcccactgcc tctccgaaac cttcccccaa gcgcggcaaa ccaccaaaga aaccagctat 6601 acccatgcat ttaattgaaa ctatagacgc tgtggcccga ggctacttct ccgagcccga 6661 gtgtcgcaca gcatgttctc caggaccatc agatttacac aggatcaaca caagcacaga 6721 ggaaaaggaa acatctcgga aacctctggc cctcaagatg cagaagaaga ccaaaaccac 6781 tttggagaaa agatccaagt cagaaactaa gaagccactt aatgcacata ccgatatctt 6841 gacaagtggt tgccttattc gagaacaact ggctcgacca ttgctagaca cagctcaatc 6901 attaactacc tcaaaatcaa tggaaaaact aagtactcct acaggggtag ccttagatgg 6961 aggggtctcc ctggagatgg cttcagggga gaacatacag aagtcggcga ctaaagttcg 7021 cacaaaagaa acaaaaccga atattattcg ggagaagaag caaaagaagt gcacacaact 7081 tttcaaaaaa tcaaaagctc cagcggaggc caataccatg gtcaaggact caatacttat 7141 caaggaaaac cagttatccg gtttgagctt ggaagcaaat aacaatggat atcatttgga 7201 gaagccaaaa gaagcccaaa atctcccaga aaaaagcgat aacctccttg tagagtcaac 7261 aaaatcagct gagaacctgt tgtcattcct acctggcgcc gtggagaact ccactaactt 7321 tacatttaac gctcaaactc caccatccat attgctaatg gatcctcttg tttttaatgc 7381 aacaggagcc accagcagca acattgttgc acctgcatca gcatcaccaa caccgttaca 7441 gtcacaacat tccaatggta ctattcaacc tgcaactacg ccggtattcc tacctcctat 7501 gcctcgtgtg gtctgccact cgcaccatca acatggagtc aagcgcaatc gatcacgttc 7561 caaatttggc agtcgaaagc ggcaaaagtt aaaacattcc acggtgtcat ttgaagttga 7621 cgaaacactg ccgccagctc cgcgtatgga tgttgtgcca aaatggaaca atggctggac 7681 ttgggagggt aaacaattcc agggtgctgt ctttttgaat agcgatgatc cattggttat 7741 acgaacttgt tatcctgcta tgcgccattt ggagggagac attatacgca cccgcgactg 7801 tgtccttcta aaggccaatg aagataacga gttgccttat gtggccaagg tggcccacct 7861 ctgggaaaac cctgaagacg gtgaaatgat gatgtctctc ttgtggtact atcgtcctga 7921 acacaccgaa caaggccgtc agttatgcga tagccctgac gaagtatacg cctcgcgcca 7981 tcgagatcac aattcagtgg cctgcgttga agataaatgt tatgtcttga cctttagtga 8041 atactgcaga tatcgccgaa gacttcgagc agctgaagag gatatcgaag atgttaacat 8101 tgtaccgaaa cgacccaatt actacagtat acgcatagtg cccgacaata ccaatcccga 8161 gttggttatg ttctgccgca gggcctatga attccgaact agacgtcttc tgaagatgcc 8221 aaacaaacag gattattatg tggtgaactc ctaaagcaca catcgcagct atggttccaa 8281 cacaaatgat aaatgcatgg gaaactttaa tgaaaagaga tgatcgacga ttgacgatcg 8341 tatggcatgc atacgacaaa atggcatgga catgaattgt taaggccttt tagtaaacat 8401 taaacaattg ttaacgatac ttgtttttat tatattttcg tgacaaatta aacaaaaaca 8461 aaaattaaaa caaaaaatcc tttagaaatg ccatttcgcc tagaagctct atatgatttg 8521 taaactttcc ggatatctaa atctaaaaca cacacttgaa aggaacaacc ttattatact 8581 aaaactaaag gaaaacatag ctactaatat acacatatac aaaccgataa aacaaacaag 8641 catacatcgt acatcataca tcaacatact atatagtatt agtaacaaca tcggagagaa 8701 aagaaaactt tacacaaaat ttaaccaaaa tatttaggca taaattaata tttaacacac 8761 acacacacat accatagaca aacaactatg caaatttgaa gttgtattta tgttttctaa 8821 cttatatata gttttattaa gcgaaacaaa cgaaacccgt gctgaagatg aattatttct 8881 agaactcttt tttgtgtttg tatatttttt aatgttaagc ctttaatgga aattctaatt 8941 tcatttaatg gcaactccca tttaagttta aaaattttat tttttttttt tggaaaccag 9001 accaaattgt tttataaaca aaaaaaacac aaaattattt tgcaagaaca caaacaaaaa 9061 caatgattta aaaaatcgaa actatattca tttaaaaact attttaaatt tataaaacga 9121 ttcttaaaaa tattttaaaa acaaaacacc cttaaagaac gactactttc gctcatcaat 9181 gcgtgaatag attttgcaaa aacaaaacta aatgtatgaa atcatgtaca tcatctgcat 9241 ccattttatg acattgtatt tgtaacattt cgctctaaaa cattatttaa tatatttatt 9301 tatccctgag cttaaaccaa gcacttgagt agtttaaatt ttaattgttt taatttggaa 9361 acctatttac atacataata cacacacaca cacagacaca cattgacaca aaaaatatat 9421 aaatacttat tagaaatgca tacattattt tatttattca attcttatat gatttttgat 9481 atatataaat atatgtataa acatccccat acatgtgaaa tatttttgat aattt