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LOCUS XM_059366668 9809 bp mRNA linear INV 02-SEP-2023 variant X1, mRNA. ACCESSION XM_059366668 VERSION XM_059366668.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9809 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..9809 /gene="LOC106084413" /note="mucin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106084413" CDS 2505..8528 /gene="LOC106084413" /codon_start=1 /product="mucin-2 isoform X1" /protein_id="XP_059222651.1" /db_xref="GeneID:106084413" /translation="MKNCERCQDTTTNNKLSLTTATPIATTGSTIATAIETMKPLKTT NKSATKLSDGGGGGGGLVVGGKELVINTTDMIKAIRYSKATVATSTNSTSGGASLTIT TTATMPTGVLPLTTVVASPLCQHLLQQQHQQHNPQRCSSVGSTTSSICETVSSDSGLA MSPTEPQHHHNHHNLHHQQILQQTHQQQPTHALAHPHHLNSESYQQQQHLLHHHNMAS LSLAAVAPPATTTKMNRSLLPSNGTNGLTSGLSTTTRLSPHTQPQPHQQTTHGLLPSV VSSSTSSLLAVAPQPVALASSTPSRLSATHPAMATVVPPHSIADSQTAAASAPTPSQP QQQQHTPLQPQPPPPPPAATTLPPLVGGLGAAAMAANLAESFSLLHQQAHHFRDILYA AHLLGRGYYQPAGPLISAHVIQPVTAGPQPIPPNVPLLPTTNTKLKTLSTNAEGESTS LSANTGTAEGPDTELLLTGGDLTPYRYPPHNGNGSGSAAAAAAAHHSQQQQHQLHQQA AAHAAAAAAAAAAAAHQSSPYPRSIHTPMHYSTPYPSNYYSPYPSEPVCYSPPAYQPY FPTKVYQSAPPPSHHSAYRRYPYYPPGHPPPPADLYEQSPPPPSTAGPTGPPPVTGPP PPSQAGQHPSSTAPGGNQLVPTGPSGHSQHLEHYSGPPGYYPGYGTGGAAAGQCYTRS IQAPYMEYPPQCPCPMQQSCPKNVHTGPHIGSNSINRTHNASSNNNSSSNNSTLANLS GNTTTITTNSSATIVNHCNSNSKCSNLNVSTSMQHNSSNKPTMSDTSTVNNSSSNRNN NNSITATMILNANNKHNNSNNSEVNSNRGPVKNLKNATETQIETSNKHVNDNVPLLSV KTELSSDDTDNKSQYEENVVTPPTPPGAFSTNEDKLKDSSDKDTAIQDVEESTDKLQT TNAMTVASPTPIEAYDLTTTTPPLAASAGSAAMPPVKNSTQSTQHTMTVGRRARIGKS MAWNMVYAGAATHPTAANPVPTNLSNPALPTQACLPGRTGSQPVSPLHIATSPTSTAT VASTVLRRPTATHSDHGSTSPEHNVNGLLGKTPTPTTFFVNNVITKQEIVEVQAPLLL KAEIKSEKIKLEDDILDTMLLQHSNVAQHQSHGCQQSPQKHIIPEKNELKIIKAEPIT LSEILHESKVKIEQDCEILTPSVSKDSPLEQRPERRTELLVPKTQGRMRLLPSWQQPI HATPPPLPAVNCDIDLSTTSDDEVLDLCHSPVTGCSSSSASQPNSGKRMKILEFNKNQ CKKSPPNSYKSLIKQAEPKMYLCLSRKFEKKSRSGRIHSFKSNKGSALNNGMRRRELL LTDQQKESLRLRKKKLAAMEKRRRESKELKRSELRLKRKCTKESKTTNTDKLSIKGEN SELEDIKHNCGKVKAEHDVIDLVEDEEVDELVKNKDNDGIALKEVSVATNKEDIVVGR VPTASPKPSPKRGKPPKKPAIPMHLIETIDAVARGYFSEPECRTACSPGPSDLHRINT STEEKETSRKPLALKMQKKTKTTLEKRSKSETKKPLNAHTDILTSGCLIREQLARPLL DTAQSLTTSKSMEKLSTPTGVALDGGVSLEMASGENIQKSATKVRTKETKPNIIREKK QKKCTQLFKKSKAPAEANTMVKDSILIKENQLSGLSLEANNNGYHLEKPKEAQNLPEK SDNLLVESTKSAENLLSFLPGAVENSTNFTFNAQTPPSILLMDPLVFNATGATSSNIV APASASPTPLQSQHSNGTIQPATTPVFLPPMPRVVCHSHHQHGVKRNRSRSKFGSRKR QKLKHSTVSFEVDETLPPAPRMDVVPKWNNGWTWEGKQFQGAVFLNSDDPLVIRTCYP AMRHLEGDIIRTRDCVLLKANEDNELPYVAKVAHLWENPEDGEMMMSLLWYYRPEHTE QGRQLCDSPDEVYASRHRDHNSVACVEDKCYVLTFSEYCRYRRRLRAAEEDIEDVNIV PKRPNYYSIRIVPDNTNPELVMFCRRAYEFRTRRLLKMPNKQDYYVVNS" ORIGIN 1 tttacaaaaa tattttcttt agaaaaatgt taattaggat cttgtcttta atttaattaa 61 aatttaatta aaagttcgcc tttagaaaaa attgttgtga aattttgtct ttaaaaaatc 121 atttcgaggg gggttcggcc ctgcctgtag ttttgtcatt agagagtgtt ccgctgaaat 181 tttgtcttaa gaaaagattt tattataatt ttgtttttaa taaagatttt tttttacaat 241 tttgtcctta agaaaaataa tttttgaggc ggtcgtggcc tggcctatat ttgtctttat 301 agaatactat caatataaaa ttttcaagtt tcggtctttc atgttgcagg atggggctat 361 attcattccc actacagaaa cttttgtatt ttagctcgtt taattatatc aatatagtca 421 tacagttcgt ggtacatgcg acaccattcg ctgattttat tcattcataa tccttctttc 481 aaatacacca agttccgagc tttgatacct accaattcta gttgccatac ccacttaaac 541 tgaatgcctc ggtcttccac gctgtggcaa atctgcacct tccgtttaaa gttttttaaa 601 aatgcttcaa ccaaattgac cgaatttggc atatgaggtt ctcagtgaaa taaattttcc 661 tgcaggaaat tgattactta cgtggacgtt ctggctttct aactattaaa tggccagtac 721 tggtatatgg gcgctgtact aatatcacga cctgcagtga aaaattttcc aataagtttt 781 ttatcatttt cgttcattgt cgactattgc gctgactgac aatacgatta taaaaaaaat 841 gctgctaaca ttttgaactt gtttgtaatg tcatggatat gtgaattggt ctcttattga 901 gaaaatacct aaatacacca caccattcat tgcgactcac tgccacatga acagcaaaac 961 gcctcaacac aaccctgaaa tgcgaaacac cacgaacgct cagtgctcac caaattatgc 1021 caaacaaaat aaaagagaat aatccaacaa gaccattaaa attttcttag ccaatacaag 1081 aaatagcaga atagcagaga tgttagtgga cacaaaaaga gcgatttctt cacctttccc 1141 aatacgaagg agattatctc ttgtgctgat agcacaccat accaagtgtg acaccactac 1201 aggcctctca attggagaac agagagatac aacaaaatga gaaaaactca cggataccga 1261 tttcaagcgt ttcttatgga atcttctatg gccgaaatgg tttagtattg ctctacctgt 1321 cgtctcgtta acaacaactt aacaatagga acggtcgtgt gtgacgttga tttttagtgc 1381 tctcagcaaa aaaaaagaaa ataaatgtga aacaaaaaga agaaaacgag caaaatttga 1441 ataaaaacga tatatatctt tttgtttttg tttccctttt gagttgtcct taaggtgttg 1501 tggtttacca ctgagcacta tatcatacaa aaaataaatc gttttgtgag tgaaggctta 1561 agttacgcgt aaaaaatgct tcccctaact taaaattaga ataatataaa tattgtatta 1621 taatagaaat agtgaaagat aaaaaaagca atgaaattgt cttatttaca tgcaacaaca 1681 tgaagttaat gtgataatgt gtcattgggg ttttgctaag ccacttgtga aacaaaatca 1741 atcatacgct cgtagtaaaa gtgtaatatg cattttctga aacaacagca acagaaacta 1801 cgtctgaaat ctataaatga aaaacatcca caatagtagt gaagtgtttt atgaaaaaac 1861 gactacagca aagtgaaaat actaatatgt cgccaagaaa aaatcataat ttgtctaata 1921 ttttaactat aaaccaagtg tattaaatat tcgtaacaga ttaaaatcga gttacaccgc 1981 caaaaattag agaaatttaa aaaagtgctt aatattcata attgagaata atgagaggag 2041 attagctgta ataaatctaa taatggaata aatcattata aggtgtagcc aactaaagga 2101 aaactatcaa ttaatcaaaa cttcgttgcc aaaacaatgt aaaacaaaaa caataacata 2161 caaaacttta ttaatgataa acgatcataa ttaaactaag atgccttaaa acaatacttc 2221 cttgttataa aaccaacaac ataaaacccc aaaaacaaac aattaccaca aatctatatt 2281 ttattacaaa acaaacattt gttgagaacc taaagttaac gttaaacaag caaaaaccaa 2341 aaacagtaat agaaacaaaa caaacaaaca acaactccat cgagattaac taacgaaaca 2401 actaaacagc cgaccagcaa gcaagcaagc aagcgaacaa agcgctggac ccaacatttt 2461 attaatggct aataataaca atcgtcgtcg ttttcatttg aaatatgaaa aactgtgaac 2521 gttgtcaaga caccaccaca aacaataaat tatcattaac aacagcaaca cccatagcaa 2581 ccacaggctc cacaatagca acagccattg aaaccatgaa accacttaaa acaacaaaca 2641 aatctgcaac aaaactcagc gatggaggtg ggggtggcgg tgggttagtg gtaggtggca 2701 aagagctggt aattaatacc acagatatga taaaagccat acgttacagt aaagccacag 2761 tggccaccag caccaactcg accagcggcg gcgccagcct aaccataaca acaacggcaa 2821 caatgccaac aggtgtacta ccactaacaa cagttgtagc cagtccgttg tgtcaacatc 2881 tattacaaca acaacatcaa caacacaatc cacagcgttg ttcgagtgtt ggcagcacga 2941 cgagcagtat ctgtgaaacg gtgtcatccg attcgggtct ggcgatgtcg ccaacggagc 3001 cgcaacatca tcataatcac cataacctcc accaccagca aatattgcaa caaacgcatc 3061 aacaacagcc aactcacgct ctcgcacatc cccaccactt aaactctgag tcgtatcagc 3121 agcagcaaca tctactgcat catcataaca tggcctcgtt atctttggcg gcagtggcgc 3181 caccagcaac gacaaccaag atgaatcgta gcctattgcc atcaaatgga accaacggcc 3241 taacctcggg cctgtcaaca acaacacgtc tgtcgcctca tacccaaccg caaccacatc 3301 agcagacaac acatggttta ttgcctagtg ttgtttcgtc ttcaacatca tcattgttgg 3361 ccgtagcacc acagcctgtg gcattagcat catcaacacc aagcagatta tccgctacac 3421 atccggcgat ggcgaccgtg gtgcccccac actctatagc agattcgcaa acagcggcag 3481 catcagcgcc aacgccatca caaccacagc agcaacagca tacgccccta caaccacaac 3541 caccgccacc accacctgcc gccacaacat tgccacccct ggtgggtggt ttaggtgctg 3601 ctgcaatggc agctaatttg gccgagtcct tttcgttgtt acaccagcag gcgcatcatt 3661 ttcgagatat tctctatgcg gcgcatttac tgggtcgagg ttattatcaa ccagctggtc 3721 cattgatctc agcgcatgtc atacagccag ttacagctgg accacagcca ataccaccaa 3781 atgtgccatt gttacccacc actaatacaa agcttaagac cctatcaaca aatgccgaag 3841 gtgaaagcac gtcgctctcg gcaaatactg gaacggccga aggtcctgat acagaactcc 3901 tgctcaccgg cggcgatctg acaccctatc gttatccgcc ccataatgga aatggaagtg 3961 gctcagcagc agccgcagcc gcagcacatc atagtcaaca acaacagcat caactgcatc 4021 aacaagcagc agcacatgca gcagcagctg cagctgcagc agctgctgcc gctcatcaaa 4081 gctcaccgta tccccgatcc atccatactc ccatgcacta ctcaacgcca tatccttcga 4141 attactattc accatacccc agtgaaccag tgtgttattc gcctcctgcc tatcaaccgt 4201 atttccccac taaagtctat caaagtgccc cgccaccatc tcatcattcg gcctataggc 4261 gttatcccta ctatccgcca ggacatccgc caccgccggc agatttgtac gagcaatcac 4321 cgccaccacc atcaaccgca ggtccaaccg gaccgccacc agttacaggc ccaccgcctc 4381 cgtcacaggc cggtcaacac ccatcttcga cagcaccagg gggaaaccag cttgtgccaa 4441 ccggcccttc tggacacagt caacatttgg agcattattc tgggccgccg ggctactatc 4501 caggctatgg tacgggcggt gcagcagcag gtcaatgcta tacacgcagt attcaggctc 4561 cgtatatgga atatccgcca caatgcccat gtccaatgca acagtcgtgt ccaaaaaacg 4621 tccatactgg gcctcatatt ggtagcaaca gcatcaatcg cactcacaac gccagcagca 4681 acaacaacag cagcagcaac aacagtacat tagccaatct cagcggcaat accaccacca 4741 tcaccaccaa ctcatcagca acaatagtca atcattgcaa cagcaacagc aagtgcagca 4801 atttgaatgt ctcgacttca atgcagcaca acagcagcaa caaaccgacg atgagcgata 4861 cgagtacggt gaacaacagc agcagcaacc gcaataacaa caacagtata acagcgacga 4921 tgatattgaa tgccaataac aagcacaaca acagcaataa cagcgaagtg aattccaata 4981 gaggcccagt aaaaaatcta aaaaatgcaa ccgaaacaca aatcgaaaca tccaacaaac 5041 atgtcaacga caatgtaccc ctcttatcgg tcaaaactga attatcctcc gacgacacag 5101 acaacaaaag ccagtatgaa gaaaatgtgg tcacaccccc aactccccca ggcgccttca 5161 gcacaaacga ggataagctt aaggactcgt cggacaaaga tactgccata caggatgtgg 5221 aggagagcac agataagttg caaacaacta atgcgatgac cgttgctagc cccacaccta 5281 tagaggctta cgatttgaca actaccacac ctcctctggc ggccagtgcg ggaagtgcag 5341 cgatgccacc tgtcaagaac agtacacaat ccacacaaca cacaatgaca gtgggtagaa 5401 gagcccgcat aggtaaatca atggcttgga atatggtcta tgctggtgct gcaacccacc 5461 ccaccgctgc gaatccagtt cccacaaatt tgtcaaatcc ggctttgcca acgcaagcgt 5521 gtttaccagg acgaactggc tctcagcccg tatctccttt gcatatcgca acctcgccta 5581 cttctacggc gacagtagct tccaccgtcc taaggcgtcc cacagcgacc cactctgacc 5641 atggatcaac ctcgcctgag cataatgtca atggcctgtt gggcaaaaca ccgactccta 5701 ccacattttt tgtcaataat gtcataacca aacaggagat cgttgaagta caagcaccac 5761 tgctgctgaa ggccgaaatc aaatcggaga aaataaaact cgaagacgat atactcgata 5821 caatgttgct tcaacacagc aacgtagcgc aacaccagtc gcacggatgc caacaatctc 5881 cgcagaaaca tatcatacca gagaaaaatg agcttaaaat cataaaagct gagcccataa 5941 cactcagcga aattttgcac gaaagcaagg taaagatcga gcaggactgt gaaattctca 6001 caccatccgt atctaaagac agccccctgg agcagaggcc ggaaagacgg acagaactgc 6061 tagtgccgaa gacgcagggt agaatgcgat tgctcccttc atggcaacag ccaatacatg 6121 ccacaccccc accccttccg gcggttaatt gtgatattga cttatcgact acgtccgacg 6181 acgaagtgct cgatttgtgt cacagtcctg tcactgggtg ctcctcatcc tccgcatctc 6241 agcccaactc agggaaacgt atgaagattt tggaattcaa caaaaaccaa tgtaaaaaat 6301 ctcctcccaa tagctacaag agtctcatca agcaggctga gcccaaaatg tatctctgcc 6361 tgagccgtaa attcgaaaag aaatcgcgaa gcggtagaat tcactctttc aaatcgaaca 6421 agggcagtgc ccttaataat ggcatgcgca gaagggaact tctgctaacc gatcaacaaa 6481 aggagagtct acgactaagg aagaagaaat tggcagctat ggaaaaacgt cgcagggagt 6541 ctaaagaact taagagatcg gaattaaggc taaaacgaaa gtgcaccaag gaatccaaga 6601 cgacgaacac tgataaacta agtattaagg gcgaaaattc tgagcttgag gacatcaagc 6661 ataactgtgg caaagtgaaa gcagaacacg atgtcataga tttggtggaa gatgaagaag 6721 tggatgagtt agtgaagaat aaggacaatg atgggattgc attgaaagaa gtctcggtgg 6781 caactaataa agaagatatt gtcgttggta gagttcccac tgcctctccg aaaccttccc 6841 ccaagcgcgg caaaccacca aagaaaccag ctatacccat gcatttaatt gaaactatag 6901 acgctgtggc ccgaggctac ttctccgagc ccgagtgtcg cacagcatgt tctccaggac 6961 catcagattt acacaggatc aacacaagca cagaggaaaa ggaaacatct cggaaacctc 7021 tggccctcaa gatgcagaag aagaccaaaa ccactttgga gaaaagatcc aagtcagaaa 7081 ctaagaagcc acttaatgca cataccgata tcttgacaag tggttgcctt attcgagaac 7141 aactggctcg accattgcta gacacagctc aatcattaac tacctcaaaa tcaatggaaa 7201 aactaagtac tcctacaggg gtagccttag atggaggggt ctccctggag atggcttcag 7261 gggagaacat acagaagtcg gcgactaaag ttcgcacaaa agaaacaaaa ccgaatatta 7321 ttcgggagaa gaagcaaaag aagtgcacac aacttttcaa aaaatcaaaa gctccagcgg 7381 aggccaatac catggtcaag gactcaatac ttatcaagga aaaccagtta tccggtttga 7441 gcttggaagc aaataacaat ggatatcatt tggagaagcc aaaagaagcc caaaatctcc 7501 cagaaaaaag cgataacctc cttgtagagt caacaaaatc agctgagaac ctgttgtcat 7561 tcctacctgg cgccgtggag aactccacta actttacatt taacgctcaa actccaccat 7621 ccatattgct aatggatcct cttgttttta atgcaacagg agccaccagc agcaacattg 7681 ttgcacctgc atcagcatca ccaacaccgt tacagtcaca acattccaat ggtactattc 7741 aacctgcaac tacgccggta ttcctacctc ctatgcctcg tgtggtctgc cactcgcacc 7801 atcaacatgg agtcaagcgc aatcgatcac gttccaaatt tggcagtcga aagcggcaaa 7861 agttaaaaca ttccacggtg tcatttgaag ttgacgaaac actgccgcca gctccgcgta 7921 tggatgttgt gccaaaatgg aacaatggct ggacttggga gggtaaacaa ttccagggtg 7981 ctgtcttttt gaatagcgat gatccattgg ttatacgaac ttgttatcct gctatgcgcc 8041 atttggaggg agacattata cgcacccgcg actgtgtcct tctaaaggcc aatgaagata 8101 acgagttgcc ttatgtggcc aaggtggccc acctctggga aaaccctgaa gacggtgaaa 8161 tgatgatgtc tctcttgtgg tactatcgtc ctgaacacac cgaacaaggc cgtcagttat 8221 gcgatagccc tgacgaagta tacgcctcgc gccatcgaga tcacaattca gtggcctgcg 8281 ttgaagataa atgttatgtc ttgaccttta gtgaatactg cagatatcgc cgaagacttc 8341 gagcagctga agaggatatc gaagatgtta acattgtacc gaaacgaccc aattactaca 8401 gtatacgcat agtgcccgac aataccaatc ccgagttggt tatgttctgc cgcagggcct 8461 atgaattccg aactagacgt cttctgaaga tgccaaacaa acaggattat tatgtggtga 8521 actcctaaag cacacatcgc agctatggtt ccaacacaaa tgataaatgc atgggaaact 8581 ttaatgaaaa gagatgatcg acgattgacg atcgtatggc atgcatacga caaaatggca 8641 tggacatgaa ttgttaaggc cttttagtaa acattaaaca attgttaacg atacttgttt 8701 ttattatatt ttcgtgacaa attaaacaaa aacaaaaatt aaaacaaaaa atcctttaga 8761 aatgccattt cgcctagaag ctctatatga tttgtaaact ttccggatat ctaaatctaa 8821 aacacacact tgaaaggaac aaccttatta tactaaaact aaaggaaaac atagctacta 8881 atatacacat atacaaaccg ataaaacaaa caagcataca tcgtacatca tacatcaaca 8941 tactatatag tattagtaac aacatcggag agaaaagaaa actttacaca aaatttaacc 9001 aaaatattta ggcataaatt aatatttaac acacacacac acataccata gacaaacaac 9061 tatgcaaatt tgaagttgta tttatgtttt ctaacttata tatagtttta ttaagcgaaa 9121 caaacgaaac ccgtgctgaa gatgaattat ttctagaact cttttttgtg tttgtatatt 9181 ttttaatgtt aagcctttaa tggaaattct aatttcattt aatggcaact cccatttaag 9241 tttaaaaatt ttattttttt tttttggaaa ccagaccaaa ttgttttata aacaaaaaaa 9301 acacaaaatt attttgcaag aacacaaaca aaaacaatga tttaaaaaat cgaaactata 9361 ttcatttaaa aactatttta aatttataaa acgattctta aaaatatttt aaaaacaaaa 9421 cacccttaaa gaacgactac tttcgctcat caatgcgtga atagattttg caaaaacaaa 9481 actaaatgta tgaaatcatg tacatcatct gcatccattt tatgacattg tatttgtaac 9541 atttcgctct aaaacattat ttaatatatt tatttatccc tgagcttaaa ccaagcactt 9601 gagtagttta aattttaatt gttttaattt ggaaacctat ttacatacat aatacacaca 9661 cacacacaga cacacattga cacaaaaaat atataaatac ttattagaaa tgcatacatt 9721 attttattta ttcaattctt atatgatttt tgatatatat aaatatatgt ataaacatcc 9781 ccatacatgt gaaatatttt tgataattt