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LOCUS XM_059366650 7086 bp mRNA linear INV 02-SEP-2023 transcript variant X6, mRNA. ACCESSION XM_059366650 VERSION XM_059366650.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7086 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7086 /gene="LOC106090811" /note="CAD protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1404 Proteins" /db_xref="GeneID:106090811" CDS 124..6801 /gene="LOC106090811" /codon_start=1 /product="CAD protein" /protein_id="XP_059222633.1" /db_xref="GeneID:106090811" /translation="MSRHNCYLMLEDSTVFPGHAFGAKATVDGEVVFQTGMVGYPESM TDRSYRAQILVLTYPLIGNYGVPDFKEKDESGLPKHFEWLEGISVAALVVGEVCEQPS HWRSMQTLSQWMQSHGVPGIGGIDTRALTKKIRENGSILGRIVYECTERFDELTFSDP NIRNLVAECSVRKPLVFNETGSPRICAVDCGLKLNQIKCFVKRGARVELVPWNHDLDE STFDGLFISNGPGDPVVCKDTVGQIQKVLKSGKKPIFGICLGHQLLSTAIGCKTYKMK YGNRGHNLPCIHHGSGRCFMTSQNHGFAVDTDTLPVEWEPLFTNANDNTNEGIIHKHK PYFSVQFHPEHTAGPEDLELLFDVFLDAIKKPAIAGKSLSLRQQLTQRLMYSPKPESL LEKRPRKVLILGSGGLSIGQAGEFDYSGSQAIKAMKEEKIQTVLINPNIATVQTSKGL ADKCYFLPLTPEYVEQVIKAERPNGVLLTFGGQTALNCGVELERSGVFSKYNVKILGT PIKSIIETEDRKIFAERVNEIGEQVAPSEAVYSVEEALKAAQRIGYPVMARAAFSLGG LGSGFADSEEELEILARQALAHSSQLIIDKSLKGWKEVEYEVVRDAFDNCITVCNMEN LDPLGIHTGESIVVAPSQTLNNREYNMLRSTALKVIRHFGVVGECNIQYALNPHSEEY YIIEVNARLSRSSALASKATGYPLAYVAAKLSLGVPLPSIKNSVTGVTTACFEPSLDY CVVKIPRWDLAKFIRVSKNIGSSMKSVGEVMAIGRNFEEAFQKALRMVDNAVTGFDPH LQQVNVEELKEPTDKRPFVLAAALKADYSVDELHSLTKIDRWFLNKMQNIIQFYNQLE ESGSTLTIEQLWQAKRMGFSDKQLAEAIKVTELAIRQQRKEAGIVPFVKQIDTVAGEW PAATNYLYLTYNASENDIEFPGGYTIVVGSGVYRIGSSVEFDWCAVGCLRELRNLGKA TIMINYNPETVSTDYDMCDRLYFEEISFEVVMDIYELEHSEGIILSMGGQLPNNIAMD LHRQQAKVLGTSPESIDSAENRFKFSRMLDRKGILQPRWKELTNHESAIKFCEEVGYP CLVRPSYVLSGAAMNVAYSDQDLLTYLSAASLVSKEHPVVISKFLTEAKEIDVDAVAA DGEILCMAVSEHVENAGVHSGDATLVTPPQDLNAETLENIKRITSDLAGLLDVTGPFN MQIIAKNNELKVIECNVRVSRSFPFVSKTLNHDFVATATRAIMGLPVEPIDVLHGVGK VGVKVPQFSFSRLAGADVQLGVEMASTGEVACFGDNRYEAYLKGMMSTGFQIPKKAIL LSIGSFKHKMELLPSIRDLAKMGYKLYASMGTGDFYVEHGVKVECVQWTFDKNVTDDL SGGELMHLAEFLSQKQFDMIINLPMRGGGARRVSSFMTHGYRTRRLAVDYSIPLVTDV KCTKLLVESMRVTGRRPAMKTHTDCMTSRRMVTLPGFIDVHVHLREPGATHKEDFASG TAAALAGGVTMVCAMPNTNPSIVDRTSFSLFQELAKIGARCDYALFVGASDNNWQHIH ELAAQAAGLKMYLNDTFSTLKMTDMTIWEKHMQHWPKRAPIVCHAERQTMGAVILMAH LMDRAVHICHLARKEEIMIVKAAKEKGMRVTCEVCPHHLFLSTKDVPLIGSGRAEVRP VLCSPEDQKALWDNLEYIDVFATDHAPHTWEEKNSESPPPGFPGLESILPLLLQAVDE GRLALDDIKNKFYRNPKRIFSLPDQPNTYVEVDLDEEWVISKDFMHSKSKWTPFQGTK VKGKVHRVVLRGEVAFIDGEVLVQPGFGQNVRSQYNLAKPMEMLEIKTSCDNLENIKA LDRSTEFVSDSQANEAFSRLLSETPSKVHFSGDPSFLRPISPLPRIRCDSASNATLRE LIQKNSALNAPISPVAPTLLGRHVLSVDMFSKEQLNDIFNLAQMLKSRVSKDRPVDDL LKGKIMASVFYEVSTRTSCSFAAAMQRLGGRVIYMDETSSSVKKGETLEDSIAVMAGY SDVVVLRHPEPGAVGRAALHSRKPLINAGDGVGEHPTQALLDIFTIREEIGTVNGLTI TMVGDLKHGRTVHSLARLLTLYNVTIQYVSPDSLRMPNHIMDYLSSKGISQKTLDSLE DALPTTDVLYMTRIQRERFATEEEYERCCGKFIVTPKLMTRASRRTIVMHPLPRVFEI SKDFDSDPRAAYFRQAEYGMYIRMALLAMVVGCRN" polyA_site 7086 /gene="LOC106090811" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gccgcaagga aaggttattt tgttttcgtt ttacggttta actgcgttac attacaaaag 61 ccacgtggtt ttaagttaat ttttgcacca cccccctggc cataagcatt gccatcaatc 121 atcatgtctc ggcataattg ctatttgatg cttgaggact cgactgtttt tccgggtcac 181 gctttcggtg ccaaggccac tgttgatggc gaagttgtgt ttcaaactgg catggttggt 241 tatcccgagt ccatgacaga tcgttcatat cgtgcccaga ttttagttct tacctatccc 301 ttgataggta attatggtgt acccgatttt aaggaaaaag atgagagtgg tttgcccaaa 361 cacttcgaat ggttggaggg tatttcggtg gctgccttag tagtgggtga ggtgtgtgag 421 cagccttcac attggcggtc catgcagact ttgtcgcaat ggatgcagtc gcatggagtg 481 ccgggcattg gtggcataga tactcgtgcc ttgaccaaga agatacgtga aaatggttcc 541 attttgggac gcattgtcta cgagtgcacc gagcgcttcg atgagctgac attttctgat 601 cccaatataa gaaatttggt ggccgagtgt tcggttagga agccgttggt gtttaatgag 661 acaggctcgc cacgcatctg tgcagtggat tgtggcctca aattgaatca aatcaaatgt 721 tttgtgaagc gtggtgctcg tgtggagctg gtgccctgga atcatgattt ggatgagagc 781 acatttgatg gcctgtttat ttcgaatggt cccggcgatc cggtggtctg caaggacact 841 gtggggcaga tacaaaaggt cttgaagtcg ggcaagaagc ccatatttgg catatgtctg 901 ggccatcagt tgctgtccac ggccatcggt tgtaagacct ataaaatgaa atacggcaat 961 cgtggtcaca atctgccttg tatccaccat ggcagcgggc gctgttttat gacctcacaa 1021 aatcatggat ttgctgtgga caccgataca ttgcccgtgg aatgggagcc tttgttcacc 1081 aatgccaatg acaataccaa tgagggtatc atccacaagc acaaacccta cttttcggtg 1141 caattccatc ccgagcatac tgctggccct gaggatctgg aattactttt cgatgtcttc 1201 ttggatgcta tcaaaaaacc tgccatagcg ggaaaatcct taagcttgcg ccaacagttg 1261 actcaacgtc tgatgtattc acccaagccc gagtccctgt tggagaagag acctcgaaaa 1321 gttttgattt tgggctctgg tggtctatcc ataggccagg cgggcgaatt tgattattct 1381 ggttctcagg ccattaaggc catgaaggag gaaaaaatac aaacggtgct catcaatccc 1441 aacatagcca ctgtgcagac ttccaagggc ttggcagata agtgctactt cttgcctttg 1501 acgcctgaat atgtggagca ggtcatcaag gccgaaagac ccaatggagt gctcttgacc 1561 ttcggaggac aaaccgcctt gaattgtggt gtggagctgg agcgctctgg ggtgttttcc 1621 aaatataatg tcaagatttt gggcacaccc atcaaatcta ttattgagac cgaggatcgt 1681 aagatttttg ccgagcgcgt caatgaaatc ggagaacagg tggctccctc ggaagcggtc 1741 tattcggtgg aggaggcttt gaaggcggcc cagcgcatag gatatcctgt aatggccaga 1801 gctgcctttt ccctgggtgg gctgggttct ggatttgccg acagcgaaga ggagctcgag 1861 atcctggccc gccaggcctt ggcccattcc agccaattga ttattgacaa gtccctaaag 1921 ggctggaagg aggtggagta tgaggtggtg cgagatgcct ttgacaattg cataacggtg 1981 tgcaacatgg agaatctgga tcctttgggc attcatacgg gcgaaagcat tgtggtggct 2041 ccctcacaga ctctcaacaa cagggagtac aatatgctgc gttccacagc cctaaaggtc 2101 atacggcatt ttggtgtggt gggtgaatgc aacatccagt atgccttgaa tccccattcc 2161 gaggagtact acatcattga agtgaatgcc cgtctgtcac gcagttctgc cttggccagc 2221 aaggccactg gatatccctt ggcctatgtg gctgccaagt tgtcgttggg tgtgcccctg 2281 ccctccataa agaactctgt gacgggagtg accactgcct gctttgaacc ctcgctggat 2341 tattgtgtgg tcaagatacc acgttgggat ttggccaagt ttatacgtgt cagcaagaac 2401 ataggcagct ccatgaagag tgtgggcgag gtcatggcca ttggccgcaa tttcgaggag 2461 gcttttcaga aggccctacg tatggtggat aatgcagtga caggctttga tccccatctg 2521 cagcaggtaa atgtggaaga gctgaaggaa cccaccgaca agagaccctt tgtcctggcc 2581 gccgccctca aagccgacta ctcggtggat gaattgcatt cgctgaccaa aatcgatcgc 2641 tggttcctga ataaaatgca gaacatcatt cagttctaca atcaattgga ggaatctggc 2701 agcactctaa ccatagagca actgtggcaa gccaaacgta tgggtttttc cgacaaacaa 2761 ttggcggaag ccataaaggt caccgaattg gccatacgcc agcagcgcaa agaggccggc 2821 atcgtaccat ttgtcaagca aatcgatact gtggccgggg agtggccagc agccaccaat 2881 tacctctatc tcacctataa tgcgtcggaa aatgacatcg agtttcctgg aggctacacc 2941 atagtggtgg gttctggtgt ctatcgcatt ggctcctcgg tggaatttga ttggtgtgcc 3001 gtgggctgtc tgagagagct gcgaaatctt ggcaaggcta ccatcatgat caactacaac 3061 ccggagacgg tgtccaccga ctatgatatg tgtgaccgtt tgtatttcga ggagatcagt 3121 tttgaagtag tcatggacat ctatgaactg gagcattccg agggcatcat cctctctatg 3181 ggtggtcagc tgcccaataa tatagccatg gacttacatc gccagcaggc caaggtgctg 3241 ggcacctctc ccgaatccat agattcggca gagaatcgtt ttaaattctc ccgcatgttg 3301 gatcgcaaag gcattctaca gcctcgctgg aaagagctaa ccaatcatga aagtgccatc 3361 aaattctgtg aggaagtggg ttatccctgt cttgtccggc cttcctatgt tctctccggg 3421 gcagccatga atgtggccta ttcggatcaa gatctgctga cttatctcag tgctgcctcg 3481 ctggttagta aagaacatcc ggtggttata tcaaaattcc ttaccgaagc caaggaaatc 3541 gatgtggatg ctgtggccgc ggatggtgaa attttatgca tggccgtttc ggagcatgtg 3601 gagaatgccg gcgttcactc gggcgatgct accttggtga caccacccca ggatttgaac 3661 gccgaaactt tggagaatat caagagaata accagtgatc tggctggcct cttagatgta 3721 acgggtccat tcaatatgca gattatagcc aaaaataatg aactcaaggt tattgagtgt 3781 aatgttcgtg tttcccgctc cttccccttt gtctccaaga cgttgaacca tgattttgtg 3841 gccactgcca ccagggccat tatgggcttg ccagtggagc cgatagacgt tttacatggc 3901 gtaggcaagg tgggcgtcaa agtgccccaa ttcagttttt cgcgcctggc cggtgccgat 3961 gtgcagttgg gtgtagaaat ggcctccacc ggagaggtgg cctgctttgg tgataatcgt 4021 tacgaggcct atttgaaggg tatgatgtcc actgggttcc agatacccaa aaaagccata 4081 cttttgtcta ttggaagttt caagcataaa atggaacttt taccttccat tcgagatctg 4141 gctaagatgg gctataaact gtatgcttcc atgggtacgg gagattttta tgtggaacat 4201 ggagtaaagg tggaatgcgt tcagtggact ttcgataaaa atgttaccga cgatcttagt 4261 ggaggtgagc ttatgcactt ggccgagttc ttatcccaga agcaattcga tatgataatc 4321 aatctaccca tgagaggagg gggagctaga agagtttcct ccttcatgac ccatggctat 4381 cgcacacgac gccttgccgt cgattactcc attcccctgg tcaccgatgt gaagtgcact 4441 aaactattgg tagaatctat gcgagtgact ggtcgcaggc ctgccatgaa gacccataca 4501 gattgcatga cctcaaggcg aatggtaacg ctgccaggct ttatagatgt tcatgtacat 4561 ctccgagaac caggagccac acacaaagag gactttgcca gtggcacagc tgccgcttta 4621 gctggaggtg ttaccatggt ttgtgccatg cccaacacca atccctccat agtggatcgt 4681 accagctttt cactgttcca agaattggcc aagattgggg cacgctgcga ttatgccctc 4741 tttgtgggag catcggacaa caattggcag catatccatg agttggccgc ccaggcggca 4801 ggattaaaga tgtatttgaa tgacactttc agtactttga aaatgaccga tatgaccatt 4861 tgggagaagc acatgcagca ttggccgaag cgtgctccca ttgtttgcca cgccgaaaga 4921 cagaccatgg gtgctgtgat actaatggcc catctcatgg atcgagctgt ccacatctgc 4981 catttggctc gcaaggagga gataatgatt gtcaaggcag ccaaggagaa gggcatgcga 5041 gtgacttgcg aggtgtgtcc ccatcatttg tttttgtcca ccaaggatgt accgctcata 5101 gggtcagggc gagctgaagt aaggcccgtc ttatgttctc ccgaagatca aaaggccttg 5161 tgggataatc tggagtacat agacgttttc gccacggatc atgctcccca cacttgggaa 5221 gagaaaaatt cagagagtcc tcctccagga ttcccaggat tggaatctat actgcctttg 5281 ctgttgcagg cagtggatga gggacgtcta gcgctggatg acatcaaaaa taaattctat 5341 cgcaatccca agaggatatt cagtttgcca gatcaaccca atacctatgt ggaggtggat 5401 ttggatgagg agtgggtgat atcgaaagac tttatgcact ccaagtccaa atggacgcct 5461 ttccagggca ccaaggtcaa gggcaaggtg catcgggtgg tattgcgcgg cgaagtggcc 5521 tttatagacg gtgaggtgtt ggtgcaaccc ggctttggac aaaatgtgcg cagccaatat 5581 aatctcgcca agcccatgga aatgttggag attaagacct cgtgcgataa cttggaaaat 5641 ataaaagcct tggatcgcag cactgagttc gtctctgatt cacaggccaa tgaggccttc 5701 tctagattgc tctccgagac tccttcgaag gttcactttt cgggagatcc cagctttttg 5761 cgtcccatat ctccattgcc tcgcattcgt tgtgattcgg ccagcaatgc cacactgcga 5821 gaacttatac agaaaaattc tgccttaaat gctcccattt caccagtggc gcccactttg 5881 ctgggacgcc atgtcttgtc ggtggatatg tttagcaaag agcaattgaa tgatatcttc 5941 aatttggccc aaatgttgaa gagtcgagtg tccaaggatc gccctgtcga cgatttgctg 6001 aagggtaaaa taatggcctc cgtcttctat gaggtcagca ccagaacttc atgcagcttt 6061 gcagcagcca tgcaacgctt gggaggacgt gtcatttata tggatgagac aagttcctcg 6121 gtgaaaaagg gcgagacatt ggaggacagc attgccgtta tggcaggata ttccgatgtg 6181 gtggtgctaa ggcatcccga gccgggcgca gtgggtcgcg ccgctttaca ctcacgcaaa 6241 cccctcatca atgccggcga tggtgtgggc gaacacccca cacaggcctt acttgacatc 6301 tttaccatac gcgaagagat aggcactgtc aatggtttga ctattaccat ggttggtgat 6361 ttaaaacatg gccgtactgt acattctttg gcccgcctat tgactttgta taatgttacc 6421 atacaatatg tcagcccgga tagtttacgc atgcctaatc acataatgga ttatctatca 6481 tcaaagggca ttagccaaaa gaccctggat agtctagagg atgctttgcc caccacagat 6541 gttttgtata tgacacgcat acaaagagaa cgctttgcca ccgaggagga atatgaaagg 6601 tgctgcggca aattcatagt cacaccgaaa ctaatgacac gcgccagtcg ccgcaccata 6661 gtcatgcatc ctttgcctcg tgtctttgag ataagcaaag atttcgattc ggatcctaga 6721 gcagcttact tccgtcaagc ggaatatggc atgtacattc gcatggccct tttggccatg 6781 gtggtgggtt gtcgcaactg atatgaagca ccacaaacgc cgccgccgcc ggcgccaaat 6841 attgcagaag aaggacgact gtgactttga tgtttttcag aaaccaactt ttccattaac 6901 cgaaaacagg acacatgaat acacttatga agtgtgacat ccagttcatt ttaaccattt 6961 tttctataca atttttatat gaatctaacc tacatactaa acctaaccta catactaatc 7021 taacctacta tactaaagtt agttgataag ataaaacgtc aaaaaatttt tgatacgctg 7081 aaataa