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LOCUS XM_059366647 7095 bp mRNA linear INV 02-SEP-2023 transcript variant X3, mRNA. ACCESSION XM_059366647 VERSION XM_059366647.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7095 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7095 /gene="LOC106090811" /note="CAD protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1404 Proteins" /db_xref="GeneID:106090811" CDS 133..6810 /gene="LOC106090811" /codon_start=1 /product="CAD protein" /protein_id="XP_059222630.1" /db_xref="GeneID:106090811" /translation="MSRHNCYLMLEDSTVFPGHAFGAKATVDGEVVFQTGMVGYPESM TDRSYRAQILVLTYPLIGNYGVPDFKEKDESGLPKHFEWLEGISVAALVVGEVCEQPS HWRSMQTLSQWMQSHGVPGIGGIDTRALTKKIRENGSILGRIVYECTERFDELTFSDP NIRNLVAECSVRKPLVFNETGSPRICAVDCGLKLNQIKCFVKRGARVELVPWNHDLDE STFDGLFISNGPGDPVVCKDTVGQIQKVLKSGKKPIFGICLGHQLLSTAIGCKTYKMK YGNRGHNLPCIHHGSGRCFMTSQNHGFAVDTDTLPVEWEPLFTNANDNTNEGIIHKHK PYFSVQFHPEHTAGPEDLELLFDVFLDAIKKPAIAGKSLSLRQQLTQRLMYSPKPESL LEKRPRKVLILGSGGLSIGQAGEFDYSGSQAIKAMKEEKIQTVLINPNIATVQTSKGL ADKCYFLPLTPEYVEQVIKAERPNGVLLTFGGQTALNCGVELERSGVFSKYNVKILGT PIKSIIETEDRKIFAERVNEIGEQVAPSEAVYSVEEALKAAQRIGYPVMARAAFSLGG LGSGFADSEEELEILARQALAHSSQLIIDKSLKGWKEVEYEVVRDAFDNCITVCNMEN LDPLGIHTGESIVVAPSQTLNNREYNMLRSTALKVIRHFGVVGECNIQYALNPHSEEY YIIEVNARLSRSSALASKATGYPLAYVAAKLSLGVPLPSIKNSVTGVTTACFEPSLDY CVVKIPRWDLAKFIRVSKNIGSSMKSVGEVMAIGRNFEEAFQKALRMVDNAVTGFDPH LQQVNVEELKEPTDKRPFVLAAALKADYSVDELHSLTKIDRWFLNKMQNIIQFYNQLE ESGSTLTIEQLWQAKRMGFSDKQLAEAIKVTELAIRQQRKEAGIVPFVKQIDTVAGEW PAATNYLYLTYNASENDIEFPGGYTIVVGSGVYRIGSSVEFDWCAVGCLRELRNLGKA TIMINYNPETVSTDYDMCDRLYFEEISFEVVMDIYELEHSEGIILSMGGQLPNNIAMD LHRQQAKVLGTSPESIDSAENRFKFSRMLDRKGILQPRWKELTNHESAIKFCEEVGYP CLVRPSYVLSGAAMNVAYSDQDLLTYLSAASLVSKEHPVVISKFLTEAKEIDVDAVAA DGEILCMAVSEHVENAGVHSGDATLVTPPQDLNAETLENIKRITSDLAGLLDVTGPFN MQIIAKNNELKVIECNVRVSRSFPFVSKTLNHDFVATATRAIMGLPVEPIDVLHGVGK VGVKVPQFSFSRLAGADVQLGVEMASTGEVACFGDNRYEAYLKGMMSTGFQIPKKAIL LSIGSFKHKMELLPSIRDLAKMGYKLYASMGTGDFYVEHGVKVECVQWTFDKNVTDDL SGGELMHLAEFLSQKQFDMIINLPMRGGGARRVSSFMTHGYRTRRLAVDYSIPLVTDV KCTKLLVESMRVTGRRPAMKTHTDCMTSRRMVTLPGFIDVHVHLREPGATHKEDFASG TAAALAGGVTMVCAMPNTNPSIVDRTSFSLFQELAKIGARCDYALFVGASDNNWQHIH ELAAQAAGLKMYLNDTFSTLKMTDMTIWEKHMQHWPKRAPIVCHAERQTMGAVILMAH LMDRAVHICHLARKEEIMIVKAAKEKGMRVTCEVCPHHLFLSTKDVPLIGSGRAEVRP VLCSPEDQKALWDNLEYIDVFATDHAPHTWEEKNSESPPPGFPGLESILPLLLQAVDE GRLALDDIKNKFYRNPKRIFSLPDQPNTYVEVDLDEEWVISKDFMHSKSKWTPFQGTK VKGKVHRVVLRGEVAFIDGEVLVQPGFGQNVRSQYNLAKPMEMLEIKTSCDNLENIKA LDRSTEFVSDSQANEAFSRLLSETPSKVHFSGDPSFLRPISPLPRIRCDSASNATLRE LIQKNSALNAPISPVAPTLLGRHVLSVDMFSKEQLNDIFNLAQMLKSRVSKDRPVDDL LKGKIMASVFYEVSTRTSCSFAAAMQRLGGRVIYMDETSSSVKKGETLEDSIAVMAGY SDVVVLRHPEPGAVGRAALHSRKPLINAGDGVGEHPTQALLDIFTIREEIGTVNGLTI TMVGDLKHGRTVHSLARLLTLYNVTIQYVSPDSLRMPNHIMDYLSSKGISQKTLDSLE DALPTTDVLYMTRIQRERFATEEEYERCCGKFIVTPKLMTRASRRTIVMHPLPRVFEI SKDFDSDPRAAYFRQAEYGMYIRMALLAMVVGCRN" polyA_site 7095 /gene="LOC106090811" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tattttaaaa attgctcacc agtgccttta aactagtaca actccaacca acacaactct 61 gcctcgaaaa tgcttcactt tgatttaatt tttgcaccac ccccctggcc ataagcattg 121 ccatcaatca tcatgtctcg gcataattgc tatttgatgc ttgaggactc gactgttttt 181 ccgggtcacg ctttcggtgc caaggccact gttgatggcg aagttgtgtt tcaaactggc 241 atggttggtt atcccgagtc catgacagat cgttcatatc gtgcccagat tttagttctt 301 acctatccct tgataggtaa ttatggtgta cccgatttta aggaaaaaga tgagagtggt 361 ttgcccaaac acttcgaatg gttggagggt atttcggtgg ctgccttagt agtgggtgag 421 gtgtgtgagc agccttcaca ttggcggtcc atgcagactt tgtcgcaatg gatgcagtcg 481 catggagtgc cgggcattgg tggcatagat actcgtgcct tgaccaagaa gatacgtgaa 541 aatggttcca ttttgggacg cattgtctac gagtgcaccg agcgcttcga tgagctgaca 601 ttttctgatc ccaatataag aaatttggtg gccgagtgtt cggttaggaa gccgttggtg 661 tttaatgaga caggctcgcc acgcatctgt gcagtggatt gtggcctcaa attgaatcaa 721 atcaaatgtt ttgtgaagcg tggtgctcgt gtggagctgg tgccctggaa tcatgatttg 781 gatgagagca catttgatgg cctgtttatt tcgaatggtc ccggcgatcc ggtggtctgc 841 aaggacactg tggggcagat acaaaaggtc ttgaagtcgg gcaagaagcc catatttggc 901 atatgtctgg gccatcagtt gctgtccacg gccatcggtt gtaagaccta taaaatgaaa 961 tacggcaatc gtggtcacaa tctgccttgt atccaccatg gcagcgggcg ctgttttatg 1021 acctcacaaa atcatggatt tgctgtggac accgatacat tgcccgtgga atgggagcct 1081 ttgttcacca atgccaatga caataccaat gagggtatca tccacaagca caaaccctac 1141 ttttcggtgc aattccatcc cgagcatact gctggccctg aggatctgga attacttttc 1201 gatgtcttct tggatgctat caaaaaacct gccatagcgg gaaaatcctt aagcttgcgc 1261 caacagttga ctcaacgtct gatgtattca cccaagcccg agtccctgtt ggagaagaga 1321 cctcgaaaag ttttgatttt gggctctggt ggtctatcca taggccaggc gggcgaattt 1381 gattattctg gttctcaggc cattaaggcc atgaaggagg aaaaaataca aacggtgctc 1441 atcaatccca acatagccac tgtgcagact tccaagggct tggcagataa gtgctacttc 1501 ttgcctttga cgcctgaata tgtggagcag gtcatcaagg ccgaaagacc caatggagtg 1561 ctcttgacct tcggaggaca aaccgccttg aattgtggtg tggagctgga gcgctctggg 1621 gtgttttcca aatataatgt caagattttg ggcacaccca tcaaatctat tattgagacc 1681 gaggatcgta agatttttgc cgagcgcgtc aatgaaatcg gagaacaggt ggctccctcg 1741 gaagcggtct attcggtgga ggaggctttg aaggcggccc agcgcatagg atatcctgta 1801 atggccagag ctgccttttc cctgggtggg ctgggttctg gatttgccga cagcgaagag 1861 gagctcgaga tcctggcccg ccaggccttg gcccattcca gccaattgat tattgacaag 1921 tccctaaagg gctggaagga ggtggagtat gaggtggtgc gagatgcctt tgacaattgc 1981 ataacggtgt gcaacatgga gaatctggat cctttgggca ttcatacggg cgaaagcatt 2041 gtggtggctc cctcacagac tctcaacaac agggagtaca atatgctgcg ttccacagcc 2101 ctaaaggtca tacggcattt tggtgtggtg ggtgaatgca acatccagta tgccttgaat 2161 ccccattccg aggagtacta catcattgaa gtgaatgccc gtctgtcacg cagttctgcc 2221 ttggccagca aggccactgg atatcccttg gcctatgtgg ctgccaagtt gtcgttgggt 2281 gtgcccctgc cctccataaa gaactctgtg acgggagtga ccactgcctg ctttgaaccc 2341 tcgctggatt attgtgtggt caagatacca cgttgggatt tggccaagtt tatacgtgtc 2401 agcaagaaca taggcagctc catgaagagt gtgggcgagg tcatggccat tggccgcaat 2461 ttcgaggagg cttttcagaa ggccctacgt atggtggata atgcagtgac aggctttgat 2521 ccccatctgc agcaggtaaa tgtggaagag ctgaaggaac ccaccgacaa gagacccttt 2581 gtcctggccg ccgccctcaa agccgactac tcggtggatg aattgcattc gctgaccaaa 2641 atcgatcgct ggttcctgaa taaaatgcag aacatcattc agttctacaa tcaattggag 2701 gaatctggca gcactctaac catagagcaa ctgtggcaag ccaaacgtat gggtttttcc 2761 gacaaacaat tggcggaagc cataaaggtc accgaattgg ccatacgcca gcagcgcaaa 2821 gaggccggca tcgtaccatt tgtcaagcaa atcgatactg tggccgggga gtggccagca 2881 gccaccaatt acctctatct cacctataat gcgtcggaaa atgacatcga gtttcctgga 2941 ggctacacca tagtggtggg ttctggtgtc tatcgcattg gctcctcggt ggaatttgat 3001 tggtgtgccg tgggctgtct gagagagctg cgaaatcttg gcaaggctac catcatgatc 3061 aactacaacc cggagacggt gtccaccgac tatgatatgt gtgaccgttt gtatttcgag 3121 gagatcagtt ttgaagtagt catggacatc tatgaactgg agcattccga gggcatcatc 3181 ctctctatgg gtggtcagct gcccaataat atagccatgg acttacatcg ccagcaggcc 3241 aaggtgctgg gcacctctcc cgaatccata gattcggcag agaatcgttt taaattctcc 3301 cgcatgttgg atcgcaaagg cattctacag cctcgctgga aagagctaac caatcatgaa 3361 agtgccatca aattctgtga ggaagtgggt tatccctgtc ttgtccggcc ttcctatgtt 3421 ctctccgggg cagccatgaa tgtggcctat tcggatcaag atctgctgac ttatctcagt 3481 gctgcctcgc tggttagtaa agaacatccg gtggttatat caaaattcct taccgaagcc 3541 aaggaaatcg atgtggatgc tgtggccgcg gatggtgaaa ttttatgcat ggccgtttcg 3601 gagcatgtgg agaatgccgg cgttcactcg ggcgatgcta ccttggtgac accaccccag 3661 gatttgaacg ccgaaacttt ggagaatatc aagagaataa ccagtgatct ggctggcctc 3721 ttagatgtaa cgggtccatt caatatgcag attatagcca aaaataatga actcaaggtt 3781 attgagtgta atgttcgtgt ttcccgctcc ttcccctttg tctccaagac gttgaaccat 3841 gattttgtgg ccactgccac cagggccatt atgggcttgc cagtggagcc gatagacgtt 3901 ttacatggcg taggcaaggt gggcgtcaaa gtgccccaat tcagtttttc gcgcctggcc 3961 ggtgccgatg tgcagttggg tgtagaaatg gcctccaccg gagaggtggc ctgctttggt 4021 gataatcgtt acgaggccta tttgaagggt atgatgtcca ctgggttcca gatacccaaa 4081 aaagccatac ttttgtctat tggaagtttc aagcataaaa tggaactttt accttccatt 4141 cgagatctgg ctaagatggg ctataaactg tatgcttcca tgggtacggg agatttttat 4201 gtggaacatg gagtaaaggt ggaatgcgtt cagtggactt tcgataaaaa tgttaccgac 4261 gatcttagtg gaggtgagct tatgcacttg gccgagttct tatcccagaa gcaattcgat 4321 atgataatca atctacccat gagaggaggg ggagctagaa gagtttcctc cttcatgacc 4381 catggctatc gcacacgacg ccttgccgtc gattactcca ttcccctggt caccgatgtg 4441 aagtgcacta aactattggt agaatctatg cgagtgactg gtcgcaggcc tgccatgaag 4501 acccatacag attgcatgac ctcaaggcga atggtaacgc tgccaggctt tatagatgtt 4561 catgtacatc tccgagaacc aggagccaca cacaaagagg actttgccag tggcacagct 4621 gccgctttag ctggaggtgt taccatggtt tgtgccatgc ccaacaccaa tccctccata 4681 gtggatcgta ccagcttttc actgttccaa gaattggcca agattggggc acgctgcgat 4741 tatgccctct ttgtgggagc atcggacaac aattggcagc atatccatga gttggccgcc 4801 caggcggcag gattaaagat gtatttgaat gacactttca gtactttgaa aatgaccgat 4861 atgaccattt gggagaagca catgcagcat tggccgaagc gtgctcccat tgtttgccac 4921 gccgaaagac agaccatggg tgctgtgata ctaatggccc atctcatgga tcgagctgtc 4981 cacatctgcc atttggctcg caaggaggag ataatgattg tcaaggcagc caaggagaag 5041 ggcatgcgag tgacttgcga ggtgtgtccc catcatttgt ttttgtccac caaggatgta 5101 ccgctcatag ggtcagggcg agctgaagta aggcccgtct tatgttctcc cgaagatcaa 5161 aaggccttgt gggataatct ggagtacata gacgttttcg ccacggatca tgctccccac 5221 acttgggaag agaaaaattc agagagtcct cctccaggat tcccaggatt ggaatctata 5281 ctgcctttgc tgttgcaggc agtggatgag ggacgtctag cgctggatga catcaaaaat 5341 aaattctatc gcaatcccaa gaggatattc agtttgccag atcaacccaa tacctatgtg 5401 gaggtggatt tggatgagga gtgggtgata tcgaaagact ttatgcactc caagtccaaa 5461 tggacgcctt tccagggcac caaggtcaag ggcaaggtgc atcgggtggt attgcgcggc 5521 gaagtggcct ttatagacgg tgaggtgttg gtgcaacccg gctttggaca aaatgtgcgc 5581 agccaatata atctcgccaa gcccatggaa atgttggaga ttaagacctc gtgcgataac 5641 ttggaaaata taaaagcctt ggatcgcagc actgagttcg tctctgattc acaggccaat 5701 gaggccttct ctagattgct ctccgagact ccttcgaagg ttcacttttc gggagatccc 5761 agctttttgc gtcccatatc tccattgcct cgcattcgtt gtgattcggc cagcaatgcc 5821 acactgcgag aacttataca gaaaaattct gccttaaatg ctcccatttc accagtggcg 5881 cccactttgc tgggacgcca tgtcttgtcg gtggatatgt ttagcaaaga gcaattgaat 5941 gatatcttca atttggccca aatgttgaag agtcgagtgt ccaaggatcg ccctgtcgac 6001 gatttgctga agggtaaaat aatggcctcc gtcttctatg aggtcagcac cagaacttca 6061 tgcagctttg cagcagccat gcaacgcttg ggaggacgtg tcatttatat ggatgagaca 6121 agttcctcgg tgaaaaaggg cgagacattg gaggacagca ttgccgttat ggcaggatat 6181 tccgatgtgg tggtgctaag gcatcccgag ccgggcgcag tgggtcgcgc cgctttacac 6241 tcacgcaaac ccctcatcaa tgccggcgat ggtgtgggcg aacaccccac acaggcctta 6301 cttgacatct ttaccatacg cgaagagata ggcactgtca atggtttgac tattaccatg 6361 gttggtgatt taaaacatgg ccgtactgta cattctttgg cccgcctatt gactttgtat 6421 aatgttacca tacaatatgt cagcccggat agtttacgca tgcctaatca cataatggat 6481 tatctatcat caaagggcat tagccaaaag accctggata gtctagagga tgctttgccc 6541 accacagatg ttttgtatat gacacgcata caaagagaac gctttgccac cgaggaggaa 6601 tatgaaaggt gctgcggcaa attcatagtc acaccgaaac taatgacacg cgccagtcgc 6661 cgcaccatag tcatgcatcc tttgcctcgt gtctttgaga taagcaaaga tttcgattcg 6721 gatcctagag cagcttactt ccgtcaagcg gaatatggca tgtacattcg catggccctt 6781 ttggccatgg tggtgggttg tcgcaactga tatgaagcac cacaaacgcc gccgccgccg 6841 gcgccaaata ttgcagaaga aggacgactg tgactttgat gtttttcaga aaccaacttt 6901 tccattaacc gaaaacagga cacatgaata cacttatgaa gtgtgacatc cagttcattt 6961 taaccatttt ttctatacaa tttttatatg aatctaacct acatactaaa cctaacctac 7021 atactaatct aacctactat actaaagtta gttgataaga taaaacgtca aaaaattttt 7081 gatacgctga aataa