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LOCUS XM_059366645 7386 bp mRNA linear INV 02-SEP-2023 transcript variant X1, mRNA. ACCESSION XM_059366645 VERSION XM_059366645.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7386 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7386 /gene="LOC106090811" /note="CAD protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1404 Proteins" /db_xref="GeneID:106090811" CDS 424..7101 /gene="LOC106090811" /codon_start=1 /product="CAD protein" /protein_id="XP_059222628.1" /db_xref="GeneID:106090811" /translation="MSRHNCYLMLEDSTVFPGHAFGAKATVDGEVVFQTGMVGYPESM TDRSYRAQILVLTYPLIGNYGVPDFKEKDESGLPKHFEWLEGISVAALVVGEVCEQPS HWRSMQTLSQWMQSHGVPGIGGIDTRALTKKIRENGSILGRIVYECTERFDELTFSDP NIRNLVAECSVRKPLVFNETGSPRICAVDCGLKLNQIKCFVKRGARVELVPWNHDLDE STFDGLFISNGPGDPVVCKDTVGQIQKVLKSGKKPIFGICLGHQLLSTAIGCKTYKMK YGNRGHNLPCIHHGSGRCFMTSQNHGFAVDTDTLPVEWEPLFTNANDNTNEGIIHKHK PYFSVQFHPEHTAGPEDLELLFDVFLDAIKKPAIAGKSLSLRQQLTQRLMYSPKPESL LEKRPRKVLILGSGGLSIGQAGEFDYSGSQAIKAMKEEKIQTVLINPNIATVQTSKGL ADKCYFLPLTPEYVEQVIKAERPNGVLLTFGGQTALNCGVELERSGVFSKYNVKILGT PIKSIIETEDRKIFAERVNEIGEQVAPSEAVYSVEEALKAAQRIGYPVMARAAFSLGG LGSGFADSEEELEILARQALAHSSQLIIDKSLKGWKEVEYEVVRDAFDNCITVCNMEN LDPLGIHTGESIVVAPSQTLNNREYNMLRSTALKVIRHFGVVGECNIQYALNPHSEEY YIIEVNARLSRSSALASKATGYPLAYVAAKLSLGVPLPSIKNSVTGVTTACFEPSLDY CVVKIPRWDLAKFIRVSKNIGSSMKSVGEVMAIGRNFEEAFQKALRMVDNAVTGFDPH LQQVNVEELKEPTDKRPFVLAAALKADYSVDELHSLTKIDRWFLNKMQNIIQFYNQLE ESGSTLTIEQLWQAKRMGFSDKQLAEAIKVTELAIRQQRKEAGIVPFVKQIDTVAGEW PAATNYLYLTYNASENDIEFPGGYTIVVGSGVYRIGSSVEFDWCAVGCLRELRNLGKA TIMINYNPETVSTDYDMCDRLYFEEISFEVVMDIYELEHSEGIILSMGGQLPNNIAMD LHRQQAKVLGTSPESIDSAENRFKFSRMLDRKGILQPRWKELTNHESAIKFCEEVGYP CLVRPSYVLSGAAMNVAYSDQDLLTYLSAASLVSKEHPVVISKFLTEAKEIDVDAVAA DGEILCMAVSEHVENAGVHSGDATLVTPPQDLNAETLENIKRITSDLAGLLDVTGPFN MQIIAKNNELKVIECNVRVSRSFPFVSKTLNHDFVATATRAIMGLPVEPIDVLHGVGK VGVKVPQFSFSRLAGADVQLGVEMASTGEVACFGDNRYEAYLKGMMSTGFQIPKKAIL LSIGSFKHKMELLPSIRDLAKMGYKLYASMGTGDFYVEHGVKVECVQWTFDKNVTDDL SGGELMHLAEFLSQKQFDMIINLPMRGGGARRVSSFMTHGYRTRRLAVDYSIPLVTDV KCTKLLVESMRVTGRRPAMKTHTDCMTSRRMVTLPGFIDVHVHLREPGATHKEDFASG TAAALAGGVTMVCAMPNTNPSIVDRTSFSLFQELAKIGARCDYALFVGASDNNWQHIH ELAAQAAGLKMYLNDTFSTLKMTDMTIWEKHMQHWPKRAPIVCHAERQTMGAVILMAH LMDRAVHICHLARKEEIMIVKAAKEKGMRVTCEVCPHHLFLSTKDVPLIGSGRAEVRP VLCSPEDQKALWDNLEYIDVFATDHAPHTWEEKNSESPPPGFPGLESILPLLLQAVDE GRLALDDIKNKFYRNPKRIFSLPDQPNTYVEVDLDEEWVISKDFMHSKSKWTPFQGTK VKGKVHRVVLRGEVAFIDGEVLVQPGFGQNVRSQYNLAKPMEMLEIKTSCDNLENIKA LDRSTEFVSDSQANEAFSRLLSETPSKVHFSGDPSFLRPISPLPRIRCDSASNATLRE LIQKNSALNAPISPVAPTLLGRHVLSVDMFSKEQLNDIFNLAQMLKSRVSKDRPVDDL LKGKIMASVFYEVSTRTSCSFAAAMQRLGGRVIYMDETSSSVKKGETLEDSIAVMAGY SDVVVLRHPEPGAVGRAALHSRKPLINAGDGVGEHPTQALLDIFTIREEIGTVNGLTI TMVGDLKHGRTVHSLARLLTLYNVTIQYVSPDSLRMPNHIMDYLSSKGISQKTLDSLE DALPTTDVLYMTRIQRERFATEEEYERCCGKFIVTPKLMTRASRRTIVMHPLPRVFEI SKDFDSDPRAAYFRQAEYGMYIRMALLAMVVGCRN" polyA_site 7386 /gene="LOC106090811" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtaactgcc tacaataact aaaaaaaaaa tagtaattat taagcatata aaaagcaacg 61 gcatcatgta tgaacaacgt gtataagtgt ctccgtatgt gtacaagtat agcatttcaa 121 aaaccacttc aatttagtgg gaaagcaata aaaaaatata tggctgtgtg aaatctaaag 181 taaaaataaa tcgagtgcaa tttctatcgc ttattaccct aaagctccct gccaattact 241 tctttgttga cagaaaccag agtttcgtgt tgacctcaag accaacgcaa atcacatgtt 301 tgtagacatt tctctctctt tttttcattt aatgctaaag tgaaccggtt ctgcaacgaa 361 tagccgttac agtaattaat ttttgcacca cccccctggc cataagcatt gccatcaatc 421 atcatgtctc ggcataattg ctatttgatg cttgaggact cgactgtttt tccgggtcac 481 gctttcggtg ccaaggccac tgttgatggc gaagttgtgt ttcaaactgg catggttggt 541 tatcccgagt ccatgacaga tcgttcatat cgtgcccaga ttttagttct tacctatccc 601 ttgataggta attatggtgt acccgatttt aaggaaaaag atgagagtgg tttgcccaaa 661 cacttcgaat ggttggaggg tatttcggtg gctgccttag tagtgggtga ggtgtgtgag 721 cagccttcac attggcggtc catgcagact ttgtcgcaat ggatgcagtc gcatggagtg 781 ccgggcattg gtggcataga tactcgtgcc ttgaccaaga agatacgtga aaatggttcc 841 attttgggac gcattgtcta cgagtgcacc gagcgcttcg atgagctgac attttctgat 901 cccaatataa gaaatttggt ggccgagtgt tcggttagga agccgttggt gtttaatgag 961 acaggctcgc cacgcatctg tgcagtggat tgtggcctca aattgaatca aatcaaatgt 1021 tttgtgaagc gtggtgctcg tgtggagctg gtgccctgga atcatgattt ggatgagagc 1081 acatttgatg gcctgtttat ttcgaatggt cccggcgatc cggtggtctg caaggacact 1141 gtggggcaga tacaaaaggt cttgaagtcg ggcaagaagc ccatatttgg catatgtctg 1201 ggccatcagt tgctgtccac ggccatcggt tgtaagacct ataaaatgaa atacggcaat 1261 cgtggtcaca atctgccttg tatccaccat ggcagcgggc gctgttttat gacctcacaa 1321 aatcatggat ttgctgtgga caccgataca ttgcccgtgg aatgggagcc tttgttcacc 1381 aatgccaatg acaataccaa tgagggtatc atccacaagc acaaacccta cttttcggtg 1441 caattccatc ccgagcatac tgctggccct gaggatctgg aattactttt cgatgtcttc 1501 ttggatgcta tcaaaaaacc tgccatagcg ggaaaatcct taagcttgcg ccaacagttg 1561 actcaacgtc tgatgtattc acccaagccc gagtccctgt tggagaagag acctcgaaaa 1621 gttttgattt tgggctctgg tggtctatcc ataggccagg cgggcgaatt tgattattct 1681 ggttctcagg ccattaaggc catgaaggag gaaaaaatac aaacggtgct catcaatccc 1741 aacatagcca ctgtgcagac ttccaagggc ttggcagata agtgctactt cttgcctttg 1801 acgcctgaat atgtggagca ggtcatcaag gccgaaagac ccaatggagt gctcttgacc 1861 ttcggaggac aaaccgcctt gaattgtggt gtggagctgg agcgctctgg ggtgttttcc 1921 aaatataatg tcaagatttt gggcacaccc atcaaatcta ttattgagac cgaggatcgt 1981 aagatttttg ccgagcgcgt caatgaaatc ggagaacagg tggctccctc ggaagcggtc 2041 tattcggtgg aggaggcttt gaaggcggcc cagcgcatag gatatcctgt aatggccaga 2101 gctgcctttt ccctgggtgg gctgggttct ggatttgccg acagcgaaga ggagctcgag 2161 atcctggccc gccaggcctt ggcccattcc agccaattga ttattgacaa gtccctaaag 2221 ggctggaagg aggtggagta tgaggtggtg cgagatgcct ttgacaattg cataacggtg 2281 tgcaacatgg agaatctgga tcctttgggc attcatacgg gcgaaagcat tgtggtggct 2341 ccctcacaga ctctcaacaa cagggagtac aatatgctgc gttccacagc cctaaaggtc 2401 atacggcatt ttggtgtggt gggtgaatgc aacatccagt atgccttgaa tccccattcc 2461 gaggagtact acatcattga agtgaatgcc cgtctgtcac gcagttctgc cttggccagc 2521 aaggccactg gatatccctt ggcctatgtg gctgccaagt tgtcgttggg tgtgcccctg 2581 ccctccataa agaactctgt gacgggagtg accactgcct gctttgaacc ctcgctggat 2641 tattgtgtgg tcaagatacc acgttgggat ttggccaagt ttatacgtgt cagcaagaac 2701 ataggcagct ccatgaagag tgtgggcgag gtcatggcca ttggccgcaa tttcgaggag 2761 gcttttcaga aggccctacg tatggtggat aatgcagtga caggctttga tccccatctg 2821 cagcaggtaa atgtggaaga gctgaaggaa cccaccgaca agagaccctt tgtcctggcc 2881 gccgccctca aagccgacta ctcggtggat gaattgcatt cgctgaccaa aatcgatcgc 2941 tggttcctga ataaaatgca gaacatcatt cagttctaca atcaattgga ggaatctggc 3001 agcactctaa ccatagagca actgtggcaa gccaaacgta tgggtttttc cgacaaacaa 3061 ttggcggaag ccataaaggt caccgaattg gccatacgcc agcagcgcaa agaggccggc 3121 atcgtaccat ttgtcaagca aatcgatact gtggccgggg agtggccagc agccaccaat 3181 tacctctatc tcacctataa tgcgtcggaa aatgacatcg agtttcctgg aggctacacc 3241 atagtggtgg gttctggtgt ctatcgcatt ggctcctcgg tggaatttga ttggtgtgcc 3301 gtgggctgtc tgagagagct gcgaaatctt ggcaaggcta ccatcatgat caactacaac 3361 ccggagacgg tgtccaccga ctatgatatg tgtgaccgtt tgtatttcga ggagatcagt 3421 tttgaagtag tcatggacat ctatgaactg gagcattccg agggcatcat cctctctatg 3481 ggtggtcagc tgcccaataa tatagccatg gacttacatc gccagcaggc caaggtgctg 3541 ggcacctctc ccgaatccat agattcggca gagaatcgtt ttaaattctc ccgcatgttg 3601 gatcgcaaag gcattctaca gcctcgctgg aaagagctaa ccaatcatga aagtgccatc 3661 aaattctgtg aggaagtggg ttatccctgt cttgtccggc cttcctatgt tctctccggg 3721 gcagccatga atgtggccta ttcggatcaa gatctgctga cttatctcag tgctgcctcg 3781 ctggttagta aagaacatcc ggtggttata tcaaaattcc ttaccgaagc caaggaaatc 3841 gatgtggatg ctgtggccgc ggatggtgaa attttatgca tggccgtttc ggagcatgtg 3901 gagaatgccg gcgttcactc gggcgatgct accttggtga caccacccca ggatttgaac 3961 gccgaaactt tggagaatat caagagaata accagtgatc tggctggcct cttagatgta 4021 acgggtccat tcaatatgca gattatagcc aaaaataatg aactcaaggt tattgagtgt 4081 aatgttcgtg tttcccgctc cttccccttt gtctccaaga cgttgaacca tgattttgtg 4141 gccactgcca ccagggccat tatgggcttg ccagtggagc cgatagacgt tttacatggc 4201 gtaggcaagg tgggcgtcaa agtgccccaa ttcagttttt cgcgcctggc cggtgccgat 4261 gtgcagttgg gtgtagaaat ggcctccacc ggagaggtgg cctgctttgg tgataatcgt 4321 tacgaggcct atttgaaggg tatgatgtcc actgggttcc agatacccaa aaaagccata 4381 cttttgtcta ttggaagttt caagcataaa atggaacttt taccttccat tcgagatctg 4441 gctaagatgg gctataaact gtatgcttcc atgggtacgg gagattttta tgtggaacat 4501 ggagtaaagg tggaatgcgt tcagtggact ttcgataaaa atgttaccga cgatcttagt 4561 ggaggtgagc ttatgcactt ggccgagttc ttatcccaga agcaattcga tatgataatc 4621 aatctaccca tgagaggagg gggagctaga agagtttcct ccttcatgac ccatggctat 4681 cgcacacgac gccttgccgt cgattactcc attcccctgg tcaccgatgt gaagtgcact 4741 aaactattgg tagaatctat gcgagtgact ggtcgcaggc ctgccatgaa gacccataca 4801 gattgcatga cctcaaggcg aatggtaacg ctgccaggct ttatagatgt tcatgtacat 4861 ctccgagaac caggagccac acacaaagag gactttgcca gtggcacagc tgccgcttta 4921 gctggaggtg ttaccatggt ttgtgccatg cccaacacca atccctccat agtggatcgt 4981 accagctttt cactgttcca agaattggcc aagattgggg cacgctgcga ttatgccctc 5041 tttgtgggag catcggacaa caattggcag catatccatg agttggccgc ccaggcggca 5101 ggattaaaga tgtatttgaa tgacactttc agtactttga aaatgaccga tatgaccatt 5161 tgggagaagc acatgcagca ttggccgaag cgtgctccca ttgtttgcca cgccgaaaga 5221 cagaccatgg gtgctgtgat actaatggcc catctcatgg atcgagctgt ccacatctgc 5281 catttggctc gcaaggagga gataatgatt gtcaaggcag ccaaggagaa gggcatgcga 5341 gtgacttgcg aggtgtgtcc ccatcatttg tttttgtcca ccaaggatgt accgctcata 5401 gggtcagggc gagctgaagt aaggcccgtc ttatgttctc ccgaagatca aaaggccttg 5461 tgggataatc tggagtacat agacgttttc gccacggatc atgctcccca cacttgggaa 5521 gagaaaaatt cagagagtcc tcctccagga ttcccaggat tggaatctat actgcctttg 5581 ctgttgcagg cagtggatga gggacgtcta gcgctggatg acatcaaaaa taaattctat 5641 cgcaatccca agaggatatt cagtttgcca gatcaaccca atacctatgt ggaggtggat 5701 ttggatgagg agtgggtgat atcgaaagac tttatgcact ccaagtccaa atggacgcct 5761 ttccagggca ccaaggtcaa gggcaaggtg catcgggtgg tattgcgcgg cgaagtggcc 5821 tttatagacg gtgaggtgtt ggtgcaaccc ggctttggac aaaatgtgcg cagccaatat 5881 aatctcgcca agcccatgga aatgttggag attaagacct cgtgcgataa cttggaaaat 5941 ataaaagcct tggatcgcag cactgagttc gtctctgatt cacaggccaa tgaggccttc 6001 tctagattgc tctccgagac tccttcgaag gttcactttt cgggagatcc cagctttttg 6061 cgtcccatat ctccattgcc tcgcattcgt tgtgattcgg ccagcaatgc cacactgcga 6121 gaacttatac agaaaaattc tgccttaaat gctcccattt caccagtggc gcccactttg 6181 ctgggacgcc atgtcttgtc ggtggatatg tttagcaaag agcaattgaa tgatatcttc 6241 aatttggccc aaatgttgaa gagtcgagtg tccaaggatc gccctgtcga cgatttgctg 6301 aagggtaaaa taatggcctc cgtcttctat gaggtcagca ccagaacttc atgcagcttt 6361 gcagcagcca tgcaacgctt gggaggacgt gtcatttata tggatgagac aagttcctcg 6421 gtgaaaaagg gcgagacatt ggaggacagc attgccgtta tggcaggata ttccgatgtg 6481 gtggtgctaa ggcatcccga gccgggcgca gtgggtcgcg ccgctttaca ctcacgcaaa 6541 cccctcatca atgccggcga tggtgtgggc gaacacccca cacaggcctt acttgacatc 6601 tttaccatac gcgaagagat aggcactgtc aatggtttga ctattaccat ggttggtgat 6661 ttaaaacatg gccgtactgt acattctttg gcccgcctat tgactttgta taatgttacc 6721 atacaatatg tcagcccgga tagtttacgc atgcctaatc acataatgga ttatctatca 6781 tcaaagggca ttagccaaaa gaccctggat agtctagagg atgctttgcc caccacagat 6841 gttttgtata tgacacgcat acaaagagaa cgctttgcca ccgaggagga atatgaaagg 6901 tgctgcggca aattcatagt cacaccgaaa ctaatgacac gcgccagtcg ccgcaccata 6961 gtcatgcatc ctttgcctcg tgtctttgag ataagcaaag atttcgattc ggatcctaga 7021 gcagcttact tccgtcaagc ggaatatggc atgtacattc gcatggccct tttggccatg 7081 gtggtgggtt gtcgcaactg atatgaagca ccacaaacgc cgccgccgcc ggcgccaaat 7141 attgcagaag aaggacgact gtgactttga tgtttttcag aaaccaactt ttccattaac 7201 cgaaaacagg acacatgaat acacttatga agtgtgacat ccagttcatt ttaaccattt 7261 tttctataca atttttatat gaatctaacc tacatactaa acctaaccta catactaatc 7321 taacctacta tactaaagtt agttgataag ataaaacgtc aaaaaatttt tgatacgctg 7381 aaataa