Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_059366588 5419 bp mRNA linear INV 02-SEP-2023 (LOC106087414), transcript variant X4, mRNA. ACCESSION XM_059366588 VERSION XM_059366588.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5419 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5419 /gene="LOC106087414" /note="myotubularin-related protein 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106087414" CDS 934..5232 /gene="LOC106087414" /codon_start=1 /product="myotubularin-related protein 4 isoform X3" /protein_id="XP_059222571.1" /db_xref="GeneID:106087414" /translation="MEASDGSPPPSLCMVRAAELYPKPQMEKEDIELKVPFQELAGES VKYLGRTDDGILALSNYRIFLQKSSTNVETSIPLGLIESAQSRDLFHLIICCKDASTV KCSFETAEQCTEWQRRIQMSVGVPETLESIFAFPFCSWACDTLNGGAGGGSQTFSSIN NSNIENGPNPSAVYSVLDYAERLQKSGSRYEEDFMREVERLGFDLNGSWRISHANEDF KLCPSYPPKLLVPCCISDDTLNNVANFRGSRRLPAVVWRHRKSGAVIARCSQPEVGWL GWRNTNDEQLLKALADACAFDRGEQMRQFANTSQSAQSIQIPSGDSSPSSPDGSHEEV PLDEVRKILIVDARSYTSAVTNRARGGGCECIEYYPCAEIEFMNLGNIHVIRKSFHAL RQLCASPPDVPNWLGLLEKTMWLQHISGLLAASMTVCHAIEKKGRPVLVHCSDGWDRT PQIVATAQLCLDPYYRTVEGFRVLVEREWLSYGHKFADRCGHGPGSEELNERCPVFLQ WLDLVHQIHKQFSCSFEFSMGYLIKLAQHSHSGLFGNFLCNTLKERLENSVFERTFSV WSFLSSPMYRNPLYKPQSYKVLWPAHNVRDLSLWTEVYLGSLGGNQNAIDFPNYINDT PMGSISSMSKTRSYGDLITAGFIPNSMSRRSSDPNMTVDPNLTIGSNSENNSIADLQS DDREESPDILANLIHDTTRKLENLTNELDKDDFQLATKHNSTSTLESALGNDSHSLIE NGMTNNATTGMAPSTNGIGGITHQNSNEQIGCDYDSSSMQILRPSSPISKVSIAESSK LTSENLHVEQEKEEKLRRDVTDSATNGFNGIELSSNGITIEKHSNLGLDVMMKSVALD DTCLNGLETQCNGSALMTNSKTDDSLNLWHGSVNTSTDTLVPMTETKIQNGSCDLTDG GNGGSGGTSDASLSKSLQDSHTTAAVANAQASNTMEKMKISTNFNNILPKVHSTTNNN VALQAPSLPPSRPNQLSTTSSENSPKLLTQITAAAASSGSTSTNGSENISLITSQTEC ESEVMGMATDCDGRGGGMEESILILPAHRKLEIFISGKCETIAANTTTSSAMSSMLPQ SQWQSHGSLATASSTSSTVVTAQCGGGDVGSSAAATPTSSMSNFILPYANSNTIATTT TNTIIPNTTTAASSQRRRRTSSTHSGFVARQQVNGGSNTSRFSLPGGGVRSLPMTPPG LTERQQVTNSCPDGLAHALSEENIRLQQIVHEHKMLEDALRRELHEMRMALLKKSCPN CNNANASANTDEQCSALDNVENASICSWEAVEDRSTSGPSSCTTTSSSMQPNATSVLW VPDHAVSRCTSCQTEFWLGRRKHHCRSCGQIFCADCSEFWAALPDAKLFSPVRLCGPC YTVTTRSIQQQQQINHDMQHNIVGSNSSSLHLQQNSAVAVAVAAAAKPAATSKA" polyA_site 5419 /gene="LOC106087414" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtacgtgttt ggtcacttcg tcttaaaaaa aaataataaa ttaagaaatt actattaaaa 61 cagggcttat aatggtttaa tggttttagg agtaaaaaga gtaataacct tttgtgcatg 121 ttttgctagt agcatcctta tgctttgcaa agatatatgg cagaaaacca aaaaaccata 181 gagtgacttg ccacaaaact gcacagtaat aaaaacgaaa gaaagaaaaa acctttcgaa 241 caaagaagat aaagaacaaa acaaagtgtg aaataatcga aatacaatcg gaaaaatatg 301 taagttgggg taaaatggga tagagttttc taaagcaatt agcattaact gcctaaggtc 361 catggcaaaa aggttaataa tcgtatatat tcaaacaaaa tcgggtattc gtgtgtgtgt 421 ctgtatgtgt gagtgctaaa cagaacgcag ataaattttt ttcgtgtgag tgaaaaaagt 481 gaaaaaataa aataaaccga aaaaggcaac gaaacggaat aacaaatgac aacaagaaaa 541 atattctttg tttaacgcat acacaaaata ataatgaatt gttaattgtt taaacccgaa 601 gcggcggtgg caaacactct ttgtttcctt cgaataaaaa aaaaaataaa aatattaaaa 661 aaaaattata aagagaacca ccaaaaaaga aaagtaaata aaaattacgg catcgaatag 721 aattgcattt ttgttgctgc gatctcgtaa aatattgacg tcacttggaa tacgaagcta 781 caagtacaga aattaacatc tttcaacatc gtagaaaaac aaaaaaaaaa ttgttttcat 841 agattttttt gttttttcaa aagtctactg gcgtttgatt tgtcatcaaa gtaaatacaa 901 aatcatagtt gcatcttctc acttattagc taaatggagg catctgatgg atcgcctcca 961 ccatcattgt gtatggtacg agccgctgaa ttatatccaa aaccgcaaat ggagaaagaa 1021 gatatcgaat taaaagtccc atttcaggaa cttgctggcg agtctgtcaa gtatttggga 1081 cgtaccgatg atggcatttt ggccttatcc aattatcgca tatttctaca gaaatcctca 1141 accaatgttg agacatccat accattgggt cttatcgaat cggcccaaag tcgtgatctg 1201 ttccatttga tcatatgctg caaggatgca agcacagtta agtgttcatt tgagactgcc 1261 gaacagtgca ccgaatggca aagacgcata caaatgtctg tgggtgtgcc cgagactttg 1321 gaatcgatat ttgcctttcc attttgctct tgggcttgtg acaccttaaa cggcggagca 1381 ggtggtggca gccaaacatt tagcagcatt aacaattcaa atatcgaaaa tggccccaat 1441 ccctcagccg tgtattcagt gttggactat gcggaaagac tacaaaagtc cggttcacgt 1501 tatgaggaag attttatgcg tgaagtggaa cgtttgggtt ttgatttgaa tggttcatgg 1561 cgtatatcac atgcaaatga agatttcaag ctgtgtccct catatcctcc caagctttta 1621 gtaccctgtt gcatttcaga tgatactcta aataatgtgg ccaattttcg agggtctcgc 1681 cgtttgccag cggtggtgtg gcgtcatcgc aaatcggggg cagtcatagc acgttgcagc 1741 caacccgagg tgggctggtt gggctggcgc aacaccaatg atgagcagtt gctaaaagct 1801 ctggccgatg cttgtgcctt tgataggggt gaacaaatgc gtcaatttgc caacacatca 1861 caatcagcac aaagtataca gataccatcc ggagatagtt cgccctccag cccagatggc 1921 agtcatgagg aggtaccttt ggacgaagtg agaaaaatac tcattgttga tgcccgaagt 1981 tatacatccg ccgttacgaa tcgtgcccgt ggcggtggat gtgaatgtat cgaatattat 2041 ccttgtgcag aaatagaatt catgaatttg ggcaacattc atgttatacg caagagtttc 2101 catgccttga ggcaattatg tgcttcacca ccagatgtgc ccaattggct gggcctattg 2161 gagaagacca tgtggctgca acatatttcc ggcttattgg ctgcctccat gaccgtatgt 2221 catgccattg agaagaaggg cagaccggta ttagtgcatt gttccgatgg ctgggatcgt 2281 actcctcaaa tcgtggccac agcccaattg tgtttggatc cgtattatag aactgtagag 2341 ggtttccgag tgttggtaga acgtgaatgg cttagctatg gccataaatt tgccgatcgc 2401 tgtggtcatg gtcctggttc cgaggaacta aatgaacgtt gtccagtatt tctgcaatgg 2461 ctcgatcttg tgcaccaaat acataaacaa tttagttgca gttttgaatt cagcatgggc 2521 tatttgataa aattagccca acattcacat tctggtttgt ttggtaactt cttgtgcaac 2581 accctcaagg aacgtttgga aaattcagtt ttcgaaagaa ccttcagtgt ttggtctttc 2641 ctgtccagtc ccatgtatag aaatcctttg tataaaccgc aaagttataa agtgttatgg 2701 ccggctcata atgttaggga tttgtcattg tggactgaag tgtatttggg cagtttgggt 2761 ggaaatcaaa atgccataga ttttcccaac tatatcaatg atactccaat gggatctata 2821 agttccatgt caaagacgag atcttatggg gatttaataa cagcaggttt tataccgaat 2881 agtatgtcaa gacgttcaag tgatccaaat atgaccgtag atcccaattt gactatcggt 2941 tcaaattcgg aaaacaattc catagccgat ctacaatctg acgatcgtga agaatcaccc 3001 gatattttag cgaatttaat acacgacacc acaagaaaat tggaaaattt aactaatgaa 3061 cttgataaag atgatttcca attggccaca aaacacaatt ccacttccac attagaaagt 3121 gcattgggca atgacagcca cagtttgatt gaaaatggaa tgacaaataa tgcaacaact 3181 ggaatggcac cttctacaaa tggcataggc ggcattacac atcaaaattc aaatgaacaa 3241 atcggctgtg attatgacag ttcatcgatg caaatattgc gaccatcgtc cccgatatca 3301 aaagtatcga tagcagaaag ttcaaaattg acaagcgaaa atttgcatgt tgagcaagag 3361 aaagaagaga aattgaggcg agatgttact gattctgcga caaatggatt taatggcatt 3421 gaacttagtt cgaatggcat cacaattgaa aagcattcta atctgggttt ggatgtcatg 3481 atgaaaagtg tggctttgga tgatacctgc ctcaatggct tggaaacgca atgcaatggt 3541 tcagcattaa tgacaaacag taaaactgat gattctctaa atctatggca tggctccgtt 3601 aataccagta ccgatacctt ggtacctatg acagaaacta aaatacaaaa tggcagttgt 3661 gaccttacag atggaggaaa cggtggcagt ggtggcacat cagacgcctc attgtccaaa 3721 agtttacagg actcacacac aactgccgca gtcgcaaatg ctcaagcctc aaatacaatg 3781 gaaaaaatga agatcagcac aaatttcaat aacatattgc caaaagttca tagcactacc 3841 aataacaatg tggccctgca agcgccatcc ctaccaccaa gccgaccaaa tcaactttcc 3901 acgactagca gtgagaatag tccaaagctt ttaactcaaa tcactgctgc tgctgcatca 3961 tcaggaagta catctacaaa tggcagtgaa aatatatcgc taataacaag tcaaaccgaa 4021 tgtgaaagtg aagtcatggg catggcaact gattgcgatg gtcgtggtgg tggcatggag 4081 gaaagcatac taatattacc tgcacatcgg aaattagaaa tttttattag tggcaaatgt 4141 gaaacaattg cagctaatac aactacctcg tcagctatgt cgagtatgct gcctcaatct 4201 caatggcagt cccatggcag tctagcaacc gccagcagca cctcctcaac agtagtaacg 4261 gcacagtgtg gtggtggtga cgttggctct tcggctgcag caacaccaac ctcatcaatg 4321 tccaatttta ttttacctta tgctaatagc aacacaatag caaccacaac aacaaatact 4381 ataataccta atacaaccac agctgcctct agccaaagaa gaagacgaac atcttcaacg 4441 cattctggct ttgtagccag acaacaagtc aatggtggaa gtaacacttc tcgtttctca 4501 ttgcctggcg gcggtgtacg gtcattgcct atgacaccac ccggtttgac tgaaagacaa 4561 caagttacta attcctgccc cgatggttta gcccatgctt taagcgaaga aaatataaga 4621 ctacaacaaa ttgtacatga acataagatg cttgaagatg cattaagacg tgaactacat 4681 gaaatgcgta tggccttact aaagaaaagt tgtccaaact gtaataatgc caatgcatcg 4741 gcgaacactg atgaacagtg ctctgcactt gataatgtag agaatgcttc gatctgttca 4801 tgggaagctg ttgaagatcg cagtaccagt ggtccatcat cctgcaccac aaccagttcc 4861 tcaatgcaac caaatgccac aagcgtatta tgggtaccag atcatgctgt ttcgcgttgc 4921 accagttgtc agacggaatt ttggctgggc cgaaggaaac accattgccg atcctgtggc 4981 caaatattct gtgctgattg ctctgaattc tgggccgcat tgcccgatgc caaactcttt 5041 agcccggtga gactatgtgg accttgttat acggtcacaa cacgtagtat acaacaacag 5101 cagcagatca accatgatat gcaacataac atagtaggta gtaatagcag cagcctgcat 5161 ttgcaacaga actctgccgt tgctgtagct gtagccgcag ccgcaaaacc agcagcaaca 5221 tcaaaagcct gaatacaaaa taaaaaccaa tgaagaatat gcctaaatta tggggtttaa 5281 aaggagttaa aggagacaag tagacaatgg ggcttcacag ccaggagtga agcccaaaat 5341 aaaaacaaaa aaaaaaaaag attacaccta cccaacaacc atgtataccc aagatgaaga 5401 tgaagacgaa gaaaaagaa