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LOCUS XM_059366586 4927 bp mRNA linear INV 02-SEP-2023 (LOC106087414), transcript variant X2, mRNA. ACCESSION XM_059366586 VERSION XM_059366586.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4927 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4927 /gene="LOC106087414" /note="myotubularin-related protein 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106087414" CDS 178..4740 /gene="LOC106087414" /codon_start=1 /product="myotubularin-related protein 4 isoform X1" /protein_id="XP_059222569.1" /db_xref="GeneID:106087414" /translation="MEASDGSPPPSLCMVRAAELYPKPQMEKEDIELKVPFQELAGES VKYLGRTDDGILALSNYRIFLQKSSTNVETSIPLGLIESAQSRDLFHLIICCKDASTV KCSFETAEQCTEWQRRIQMSVGVPETLESIFAFPFCSWACDTLNGGAGGGSQTFSSIN NSNIENGPNPSAVYSVLDYAERLQKSGSRYEEDFMREVERLGFDLNGSWRISHANEDF KLCPSYPPKLLVPCCISDDTLNNVANFRGSRRLPAVVWRHRKSGAVIARCSQPEVGWL GWRNTNDEQLLKALADACAFDRGEQMRQFANTSQSAQSIQIPSGDSSPSSPDGSHEEV PLDEVRKILIVDARSYTSAVTNRARGGGCECIEYYPCAEIEFMNLGNIHVIRKSFHAL RQLCASPPDVPNWLGLLEKTMWLQHISGLLAASMTVCHAIEKKGRPVLVHCSDGWDRT PQIVATAQLCLDPYYRTVEGFRVLVEREWLSYGHKFADRCGHGPGSEELNERCPVFLQ WLDLVHQIHKQFSCSFEFSMGYLIKLAQHSHSGLFGNFLCNTLKERLENSVFERTFSV WSFLSSPMYRNPLYKPQSYKVLWPAHNVRDLSLWTEVYLGSLGGNQNAIDFPNYINDT PMGSISSMSKTRSYGDLITAGFIPNSMSRRSSDPNMTVDPNLTIGSNSENNSIADLQS DDREESPDILANLIHDTTRKLENLTNELDKDDFQLATKHNSTSTLESALGNDSHSLIE NGMTNNATTGMAPSTNGIGGITHQNSNEQIGCDYDSSSMQILRPSSPISKVSIAESSK LTSENLHVEQEKEEKLRRDVTDSATNGFNGIELSSNGITIEKHSNLGLDVMMKSVALD DTCLNGLETQCNGSALMTNSKTDDSLNLWHGSVNTSTDTLVPMTETKIQNGSCDLTDG GNGGSGGTSDASLSKSLQDSHTTAAVANAQASNTMEKMKISTNFNNILPKVHSTTNNN VALQAPSLPPSRPNQLSTTSSENSPKLLTQITAAAASSGSTSTNGSENISLITSQTEC ESEVMGMATDCDGRGGGMEESILILPAHRKLEIFISGKCETIAANTTTSSAMSSMLPQ SQWQSHGSLATASSTSSTVVTAQCGGGDVGSSAAATPTSSMSNFILPYANSNTIATTT TNTIIPNTTTAASSQRRRRTSSTHSGFVARQQVNGGSNTSRFSLPGGGVRSLPMTPPG LTERQQVTNSCPDGLAHALSEENIRLQQIVHEHKMLEDALRRELHEMRMALLKKSCPN CNNANASANTDEQRMLYDNTSNLPPYHRRYYARSLPSSYRKCPKHYRKRNNSGLRRYY SSSYETNTEDDEVADLYDESGSDDDDNDNGYDYDDNDMYSVSGCSALDNVENASICSW EAVEDRSTSGPSSCTTTSSSMQPNATSVLWVPDHAVSRCTSCQTEFWLGRRKHHCRSC GQIFCADCSEFWAALPDAKLFSPVRLCGPCYTVTTRSIQQQQQINHDMQHNIVGSNSS SLHLQQNSAVAVAVAAAAKPAATSKA" polyA_site 4927 /gene="LOC106087414" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcaacaaaca tttgaataca ttgatttgtt atgtgccgtt tacaaataag tgtcaataaa 61 atttatgcat aacacttcaa aacgataaaa aaaatactga aaaatatcta ctgagtgcca 121 gaaaacaaca aaaaatgtat aagtaccgct tttgttcaac attcaacatt gcgctaaatg 181 gaggcatctg atggatcgcc tccaccatca ttgtgtatgg tacgagccgc tgaattatat 241 ccaaaaccgc aaatggagaa agaagatatc gaattaaaag tcccatttca ggaacttgct 301 ggcgagtctg tcaagtattt gggacgtacc gatgatggca ttttggcctt atccaattat 361 cgcatatttc tacagaaatc ctcaaccaat gttgagacat ccataccatt gggtcttatc 421 gaatcggccc aaagtcgtga tctgttccat ttgatcatat gctgcaagga tgcaagcaca 481 gttaagtgtt catttgagac tgccgaacag tgcaccgaat ggcaaagacg catacaaatg 541 tctgtgggtg tgcccgagac tttggaatcg atatttgcct ttccattttg ctcttgggct 601 tgtgacacct taaacggcgg agcaggtggt ggcagccaaa catttagcag cattaacaat 661 tcaaatatcg aaaatggccc caatccctca gccgtgtatt cagtgttgga ctatgcggaa 721 agactacaaa agtccggttc acgttatgag gaagatttta tgcgtgaagt ggaacgtttg 781 ggttttgatt tgaatggttc atggcgtata tcacatgcaa atgaagattt caagctgtgt 841 ccctcatatc ctcccaagct tttagtaccc tgttgcattt cagatgatac tctaaataat 901 gtggccaatt ttcgagggtc tcgccgtttg ccagcggtgg tgtggcgtca tcgcaaatcg 961 ggggcagtca tagcacgttg cagccaaccc gaggtgggct ggttgggctg gcgcaacacc 1021 aatgatgagc agttgctaaa agctctggcc gatgcttgtg cctttgatag gggtgaacaa 1081 atgcgtcaat ttgccaacac atcacaatca gcacaaagta tacagatacc atccggagat 1141 agttcgccct ccagcccaga tggcagtcat gaggaggtac ctttggacga agtgagaaaa 1201 atactcattg ttgatgcccg aagttataca tccgccgtta cgaatcgtgc ccgtggcggt 1261 ggatgtgaat gtatcgaata ttatccttgt gcagaaatag aattcatgaa tttgggcaac 1321 attcatgtta tacgcaagag tttccatgcc ttgaggcaat tatgtgcttc accaccagat 1381 gtgcccaatt ggctgggcct attggagaag accatgtggc tgcaacatat ttccggctta 1441 ttggctgcct ccatgaccgt atgtcatgcc attgagaaga agggcagacc ggtattagtg 1501 cattgttccg atggctggga tcgtactcct caaatcgtgg ccacagccca attgtgtttg 1561 gatccgtatt atagaactgt agagggtttc cgagtgttgg tagaacgtga atggcttagc 1621 tatggccata aatttgccga tcgctgtggt catggtcctg gttccgagga actaaatgaa 1681 cgttgtccag tatttctgca atggctcgat cttgtgcacc aaatacataa acaatttagt 1741 tgcagttttg aattcagcat gggctatttg ataaaattag cccaacattc acattctggt 1801 ttgtttggta acttcttgtg caacaccctc aaggaacgtt tggaaaattc agttttcgaa 1861 agaaccttca gtgtttggtc tttcctgtcc agtcccatgt atagaaatcc tttgtataaa 1921 ccgcaaagtt ataaagtgtt atggccggct cataatgtta gggatttgtc attgtggact 1981 gaagtgtatt tgggcagttt gggtggaaat caaaatgcca tagattttcc caactatatc 2041 aatgatactc caatgggatc tataagttcc atgtcaaaga cgagatctta tggggattta 2101 ataacagcag gttttatacc gaatagtatg tcaagacgtt caagtgatcc aaatatgacc 2161 gtagatccca atttgactat cggttcaaat tcggaaaaca attccatagc cgatctacaa 2221 tctgacgatc gtgaagaatc acccgatatt ttagcgaatt taatacacga caccacaaga 2281 aaattggaaa atttaactaa tgaacttgat aaagatgatt tccaattggc cacaaaacac 2341 aattccactt ccacattaga aagtgcattg ggcaatgaca gccacagttt gattgaaaat 2401 ggaatgacaa ataatgcaac aactggaatg gcaccttcta caaatggcat aggcggcatt 2461 acacatcaaa attcaaatga acaaatcggc tgtgattatg acagttcatc gatgcaaata 2521 ttgcgaccat cgtccccgat atcaaaagta tcgatagcag aaagttcaaa attgacaagc 2581 gaaaatttgc atgttgagca agagaaagaa gagaaattga ggcgagatgt tactgattct 2641 gcgacaaatg gatttaatgg cattgaactt agttcgaatg gcatcacaat tgaaaagcat 2701 tctaatctgg gtttggatgt catgatgaaa agtgtggctt tggatgatac ctgcctcaat 2761 ggcttggaaa cgcaatgcaa tggttcagca ttaatgacaa acagtaaaac tgatgattct 2821 ctaaatctat ggcatggctc cgttaatacc agtaccgata ccttggtacc tatgacagaa 2881 actaaaatac aaaatggcag ttgtgacctt acagatggag gaaacggtgg cagtggtggc 2941 acatcagacg cctcattgtc caaaagttta caggactcac acacaactgc cgcagtcgca 3001 aatgctcaag cctcaaatac aatggaaaaa atgaagatca gcacaaattt caataacata 3061 ttgccaaaag ttcatagcac taccaataac aatgtggccc tgcaagcgcc atccctacca 3121 ccaagccgac caaatcaact ttccacgact agcagtgaga atagtccaaa gcttttaact 3181 caaatcactg ctgctgctgc atcatcagga agtacatcta caaatggcag tgaaaatata 3241 tcgctaataa caagtcaaac cgaatgtgaa agtgaagtca tgggcatggc aactgattgc 3301 gatggtcgtg gtggtggcat ggaggaaagc atactaatat tacctgcaca tcggaaatta 3361 gaaattttta ttagtggcaa atgtgaaaca attgcagcta atacaactac ctcgtcagct 3421 atgtcgagta tgctgcctca atctcaatgg cagtcccatg gcagtctagc aaccgccagc 3481 agcacctcct caacagtagt aacggcacag tgtggtggtg gtgacgttgg ctcttcggct 3541 gcagcaacac caacctcatc aatgtccaat tttattttac cttatgctaa tagcaacaca 3601 atagcaacca caacaacaaa tactataata cctaatacaa ccacagctgc ctctagccaa 3661 agaagaagac gaacatcttc aacgcattct ggctttgtag ccagacaaca agtcaatggt 3721 ggaagtaaca cttctcgttt ctcattgcct ggcggcggtg tacggtcatt gcctatgaca 3781 ccacccggtt tgactgaaag acaacaagtt actaattcct gccccgatgg tttagcccat 3841 gctttaagcg aagaaaatat aagactacaa caaattgtac atgaacataa gatgcttgaa 3901 gatgcattaa gacgtgaact acatgaaatg cgtatggcct tactaaagaa aagttgtcca 3961 aactgtaata atgccaatgc atcggcgaac actgatgaac agagaatgct ttatgataat 4021 acatcaaatc taccaccata ccatagacga tattatgccc gatccctgcc ttcatcgtat 4081 cgaaaatgcc cgaaacatta ccgaaagcga aacaacagtg gtttacgacg ttattatagt 4141 tcatcttatg aaacaaatac cgaagatgat gaagtggctg atttatatga tgaaagtggt 4201 agtgatgacg atgataatga taatggttat gattatgatg ataatgatat gtattcggta 4261 tcagggtgct ctgcacttga taatgtagag aatgcttcga tctgttcatg ggaagctgtt 4321 gaagatcgca gtaccagtgg tccatcatcc tgcaccacaa ccagttcctc aatgcaacca 4381 aatgccacaa gcgtattatg ggtaccagat catgctgttt cgcgttgcac cagttgtcag 4441 acggaatttt ggctgggccg aaggaaacac cattgccgat cctgtggcca aatattctgt 4501 gctgattgct ctgaattctg ggccgcattg cccgatgcca aactctttag cccggtgaga 4561 ctatgtggac cttgttatac ggtcacaaca cgtagtatac aacaacagca gcagatcaac 4621 catgatatgc aacataacat agtaggtagt aatagcagca gcctgcattt gcaacagaac 4681 tctgccgttg ctgtagctgt agccgcagcc gcaaaaccag cagcaacatc aaaagcctga 4741 atacaaaata aaaaccaatg aagaatatgc ctaaattatg gggtttaaaa ggagttaaag 4801 gagacaagta gacaatgggg cttcacagcc aggagtgaag cccaaaataa aaacaaaaaa 4861 aaaaaaagat tacacctacc caacaaccat gtatacccaa gatgaagatg aagacgaaga 4921 aaaagaa