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LOCUS XM_059366585 5685 bp mRNA linear INV 02-SEP-2023 (LOC106087414), transcript variant X1, mRNA. ACCESSION XM_059366585 VERSION XM_059366585.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5685 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5685 /gene="LOC106087414" /note="myotubularin-related protein 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106087414" CDS 936..5498 /gene="LOC106087414" /codon_start=1 /product="myotubularin-related protein 4 isoform X1" /protein_id="XP_059222568.1" /db_xref="GeneID:106087414" /translation="MEASDGSPPPSLCMVRAAELYPKPQMEKEDIELKVPFQELAGES VKYLGRTDDGILALSNYRIFLQKSSTNVETSIPLGLIESAQSRDLFHLIICCKDASTV KCSFETAEQCTEWQRRIQMSVGVPETLESIFAFPFCSWACDTLNGGAGGGSQTFSSIN NSNIENGPNPSAVYSVLDYAERLQKSGSRYEEDFMREVERLGFDLNGSWRISHANEDF KLCPSYPPKLLVPCCISDDTLNNVANFRGSRRLPAVVWRHRKSGAVIARCSQPEVGWL GWRNTNDEQLLKALADACAFDRGEQMRQFANTSQSAQSIQIPSGDSSPSSPDGSHEEV PLDEVRKILIVDARSYTSAVTNRARGGGCECIEYYPCAEIEFMNLGNIHVIRKSFHAL RQLCASPPDVPNWLGLLEKTMWLQHISGLLAASMTVCHAIEKKGRPVLVHCSDGWDRT PQIVATAQLCLDPYYRTVEGFRVLVEREWLSYGHKFADRCGHGPGSEELNERCPVFLQ WLDLVHQIHKQFSCSFEFSMGYLIKLAQHSHSGLFGNFLCNTLKERLENSVFERTFSV WSFLSSPMYRNPLYKPQSYKVLWPAHNVRDLSLWTEVYLGSLGGNQNAIDFPNYINDT PMGSISSMSKTRSYGDLITAGFIPNSMSRRSSDPNMTVDPNLTIGSNSENNSIADLQS DDREESPDILANLIHDTTRKLENLTNELDKDDFQLATKHNSTSTLESALGNDSHSLIE NGMTNNATTGMAPSTNGIGGITHQNSNEQIGCDYDSSSMQILRPSSPISKVSIAESSK LTSENLHVEQEKEEKLRRDVTDSATNGFNGIELSSNGITIEKHSNLGLDVMMKSVALD DTCLNGLETQCNGSALMTNSKTDDSLNLWHGSVNTSTDTLVPMTETKIQNGSCDLTDG GNGGSGGTSDASLSKSLQDSHTTAAVANAQASNTMEKMKISTNFNNILPKVHSTTNNN VALQAPSLPPSRPNQLSTTSSENSPKLLTQITAAAASSGSTSTNGSENISLITSQTEC ESEVMGMATDCDGRGGGMEESILILPAHRKLEIFISGKCETIAANTTTSSAMSSMLPQ SQWQSHGSLATASSTSSTVVTAQCGGGDVGSSAAATPTSSMSNFILPYANSNTIATTT TNTIIPNTTTAASSQRRRRTSSTHSGFVARQQVNGGSNTSRFSLPGGGVRSLPMTPPG LTERQQVTNSCPDGLAHALSEENIRLQQIVHEHKMLEDALRRELHEMRMALLKKSCPN CNNANASANTDEQRMLYDNTSNLPPYHRRYYARSLPSSYRKCPKHYRKRNNSGLRRYY SSSYETNTEDDEVADLYDESGSDDDDNDNGYDYDDNDMYSVSGCSALDNVENASICSW EAVEDRSTSGPSSCTTTSSSMQPNATSVLWVPDHAVSRCTSCQTEFWLGRRKHHCRSC GQIFCADCSEFWAALPDAKLFSPVRLCGPCYTVTTRSIQQQQQINHDMQHNIVGSNSS SLHLQQNSAVAVAVAAAAKPAATSKA" polyA_site 5685 /gene="LOC106087414" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgtacgtgt ttggtcactt cgtcttaaaa aaaaataata aattaagaaa ttactattaa 61 aacagggctt ataatggttt aatggtttta ggagtaaaaa gagtaataac cttttgtgca 121 tgttttgcta gtagcatcct tatgctttgc aaagatatat ggcagaaaac caaaaaacca 181 tagagtgact tgccacaaaa ctgcacagta ataaaaacga aagaaagaaa aaacctttcg 241 aacaaagaag ataaagaaca aaacaaagtg tgaaataatc gaaatacaat cggaaaaata 301 tgtaagttgg ggtaaaatgg gatagagttt tctaaagcaa ttagcattaa ctgcctaagg 361 tccatggcaa aaaggttaat aatcgtatat attcaaacaa aatcgggtat tcgtgtgtgt 421 gtctgtatgt gtgagtgcta aacagaacgc agataaattt ttttcgtgtg agtgaaaaaa 481 gtgaaaaaat aaaataaacc gaaaaaggca acgaaacgga ataacaaatg acaacaagaa 541 aaatattctt tgtttaacgc atacacaaaa taataatgaa ttgttaattg tttaaacccg 601 aagcggcggt ggcaaacact ctttgtttcc ttcgaataaa aaaaaaaata aaaatattaa 661 aaaaaaatta taaagagaac caccaaaaaa gaaaagtaaa taaaaattac ggcatcgaat 721 agaattgcat ttttgttgct gcgatctcgt aaaatattga cgtcacttgg aatacgaagc 781 tacaagtaca gaaattaaca tctttcaaca tcgtagaaaa acaaaaaaaa aattgttttc 841 atagattttt ttgttttttc aaaagtctac tggcgtttga tttgtcatca aagtaaatac 901 aaaatcatag ttgcatcttc tcacttatta gctaaatgga ggcatctgat ggatcgcctc 961 caccatcatt gtgtatggta cgagccgctg aattatatcc aaaaccgcaa atggagaaag 1021 aagatatcga attaaaagtc ccatttcagg aacttgctgg cgagtctgtc aagtatttgg 1081 gacgtaccga tgatggcatt ttggccttat ccaattatcg catatttcta cagaaatcct 1141 caaccaatgt tgagacatcc ataccattgg gtcttatcga atcggcccaa agtcgtgatc 1201 tgttccattt gatcatatgc tgcaaggatg caagcacagt taagtgttca tttgagactg 1261 ccgaacagtg caccgaatgg caaagacgca tacaaatgtc tgtgggtgtg cccgagactt 1321 tggaatcgat atttgccttt ccattttgct cttgggcttg tgacacctta aacggcggag 1381 caggtggtgg cagccaaaca tttagcagca ttaacaattc aaatatcgaa aatggcccca 1441 atccctcagc cgtgtattca gtgttggact atgcggaaag actacaaaag tccggttcac 1501 gttatgagga agattttatg cgtgaagtgg aacgtttggg ttttgatttg aatggttcat 1561 ggcgtatatc acatgcaaat gaagatttca agctgtgtcc ctcatatcct cccaagcttt 1621 tagtaccctg ttgcatttca gatgatactc taaataatgt ggccaatttt cgagggtctc 1681 gccgtttgcc agcggtggtg tggcgtcatc gcaaatcggg ggcagtcata gcacgttgca 1741 gccaacccga ggtgggctgg ttgggctggc gcaacaccaa tgatgagcag ttgctaaaag 1801 ctctggccga tgcttgtgcc tttgataggg gtgaacaaat gcgtcaattt gccaacacat 1861 cacaatcagc acaaagtata cagataccat ccggagatag ttcgccctcc agcccagatg 1921 gcagtcatga ggaggtacct ttggacgaag tgagaaaaat actcattgtt gatgcccgaa 1981 gttatacatc cgccgttacg aatcgtgccc gtggcggtgg atgtgaatgt atcgaatatt 2041 atccttgtgc agaaatagaa ttcatgaatt tgggcaacat tcatgttata cgcaagagtt 2101 tccatgcctt gaggcaatta tgtgcttcac caccagatgt gcccaattgg ctgggcctat 2161 tggagaagac catgtggctg caacatattt ccggcttatt ggctgcctcc atgaccgtat 2221 gtcatgccat tgagaagaag ggcagaccgg tattagtgca ttgttccgat ggctgggatc 2281 gtactcctca aatcgtggcc acagcccaat tgtgtttgga tccgtattat agaactgtag 2341 agggtttccg agtgttggta gaacgtgaat ggcttagcta tggccataaa tttgccgatc 2401 gctgtggtca tggtcctggt tccgaggaac taaatgaacg ttgtccagta tttctgcaat 2461 ggctcgatct tgtgcaccaa atacataaac aatttagttg cagttttgaa ttcagcatgg 2521 gctatttgat aaaattagcc caacattcac attctggttt gtttggtaac ttcttgtgca 2581 acaccctcaa ggaacgtttg gaaaattcag ttttcgaaag aaccttcagt gtttggtctt 2641 tcctgtccag tcccatgtat agaaatcctt tgtataaacc gcaaagttat aaagtgttat 2701 ggccggctca taatgttagg gatttgtcat tgtggactga agtgtatttg ggcagtttgg 2761 gtggaaatca aaatgccata gattttccca actatatcaa tgatactcca atgggatcta 2821 taagttccat gtcaaagacg agatcttatg gggatttaat aacagcaggt tttataccga 2881 atagtatgtc aagacgttca agtgatccaa atatgaccgt agatcccaat ttgactatcg 2941 gttcaaattc ggaaaacaat tccatagccg atctacaatc tgacgatcgt gaagaatcac 3001 ccgatatttt agcgaattta atacacgaca ccacaagaaa attggaaaat ttaactaatg 3061 aacttgataa agatgatttc caattggcca caaaacacaa ttccacttcc acattagaaa 3121 gtgcattggg caatgacagc cacagtttga ttgaaaatgg aatgacaaat aatgcaacaa 3181 ctggaatggc accttctaca aatggcatag gcggcattac acatcaaaat tcaaatgaac 3241 aaatcggctg tgattatgac agttcatcga tgcaaatatt gcgaccatcg tccccgatat 3301 caaaagtatc gatagcagaa agttcaaaat tgacaagcga aaatttgcat gttgagcaag 3361 agaaagaaga gaaattgagg cgagatgtta ctgattctgc gacaaatgga tttaatggca 3421 ttgaacttag ttcgaatggc atcacaattg aaaagcattc taatctgggt ttggatgtca 3481 tgatgaaaag tgtggctttg gatgatacct gcctcaatgg cttggaaacg caatgcaatg 3541 gttcagcatt aatgacaaac agtaaaactg atgattctct aaatctatgg catggctccg 3601 ttaataccag taccgatacc ttggtaccta tgacagaaac taaaatacaa aatggcagtt 3661 gtgaccttac agatggagga aacggtggca gtggtggcac atcagacgcc tcattgtcca 3721 aaagtttaca ggactcacac acaactgccg cagtcgcaaa tgctcaagcc tcaaatacaa 3781 tggaaaaaat gaagatcagc acaaatttca ataacatatt gccaaaagtt catagcacta 3841 ccaataacaa tgtggccctg caagcgccat ccctaccacc aagccgacca aatcaacttt 3901 ccacgactag cagtgagaat agtccaaagc ttttaactca aatcactgct gctgctgcat 3961 catcaggaag tacatctaca aatggcagtg aaaatatatc gctaataaca agtcaaaccg 4021 aatgtgaaag tgaagtcatg ggcatggcaa ctgattgcga tggtcgtggt ggtggcatgg 4081 aggaaagcat actaatatta cctgcacatc ggaaattaga aatttttatt agtggcaaat 4141 gtgaaacaat tgcagctaat acaactacct cgtcagctat gtcgagtatg ctgcctcaat 4201 ctcaatggca gtcccatggc agtctagcaa ccgccagcag cacctcctca acagtagtaa 4261 cggcacagtg tggtggtggt gacgttggct cttcggctgc agcaacacca acctcatcaa 4321 tgtccaattt tattttacct tatgctaata gcaacacaat agcaaccaca acaacaaata 4381 ctataatacc taatacaacc acagctgcct ctagccaaag aagaagacga acatcttcaa 4441 cgcattctgg ctttgtagcc agacaacaag tcaatggtgg aagtaacact tctcgtttct 4501 cattgcctgg cggcggtgta cggtcattgc ctatgacacc acccggtttg actgaaagac 4561 aacaagttac taattcctgc cccgatggtt tagcccatgc tttaagcgaa gaaaatataa 4621 gactacaaca aattgtacat gaacataaga tgcttgaaga tgcattaaga cgtgaactac 4681 atgaaatgcg tatggcctta ctaaagaaaa gttgtccaaa ctgtaataat gccaatgcat 4741 cggcgaacac tgatgaacag agaatgcttt atgataatac atcaaatcta ccaccatacc 4801 atagacgata ttatgcccga tccctgcctt catcgtatcg aaaatgcccg aaacattacc 4861 gaaagcgaaa caacagtggt ttacgacgtt attatagttc atcttatgaa acaaataccg 4921 aagatgatga agtggctgat ttatatgatg aaagtggtag tgatgacgat gataatgata 4981 atggttatga ttatgatgat aatgatatgt attcggtatc agggtgctct gcacttgata 5041 atgtagagaa tgcttcgatc tgttcatggg aagctgttga agatcgcagt accagtggtc 5101 catcatcctg caccacaacc agttcctcaa tgcaaccaaa tgccacaagc gtattatggg 5161 taccagatca tgctgtttcg cgttgcacca gttgtcagac ggaattttgg ctgggccgaa 5221 ggaaacacca ttgccgatcc tgtggccaaa tattctgtgc tgattgctct gaattctggg 5281 ccgcattgcc cgatgccaaa ctctttagcc cggtgagact atgtggacct tgttatacgg 5341 tcacaacacg tagtatacaa caacagcagc agatcaacca tgatatgcaa cataacatag 5401 taggtagtaa tagcagcagc ctgcatttgc aacagaactc tgccgttgct gtagctgtag 5461 ccgcagccgc aaaaccagca gcaacatcaa aagcctgaat acaaaataaa aaccaatgaa 5521 gaatatgcct aaattatggg gtttaaaagg agttaaagga gacaagtaga caatggggct 5581 tcacagccag gagtgaagcc caaaataaaa acaaaaaaaa aaaaagatta cacctaccca 5641 acaaccatgt atacccaaga tgaagatgaa gacgaagaaa aagaa