Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans box A-binding factor (LOC106092795),


LOCUS       XM_059366481            2552 bp    mRNA    linear   INV 02-SEP-2023
            mRNA.
ACCESSION   XM_059366481
VERSION     XM_059366481.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2552
                     /gene="LOC106092795"
                     /note="box A-binding factor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:106092795"
     CDS             1..1626
                     /gene="LOC106092795"
                     /codon_start=1
                     /product="box A-binding factor"
                     /protein_id="XP_059222464.1"
                     /db_xref="GeneID:106092795"
                     /translation="MNTPTQSSSSTTSLAAASVQAPTAAAAAATGNNSSINNATGLSN
                     SSNNNNSGVVVGAPAPLYEGPSCSKTNVLAVANDTSVRSLNSPLSTTSVSSTLSTTPT
                     TTSAASSLTASTGSFAFVYGNTSGGGASGGGVGHKTSASSSSSSAISSNMQLTPSSHN
                     GASTSGVVVGGSDGTTMLSDAYHHQQMQIQLQQQFEQHYQIQFYDQQTYLQQQQQQQQ
                     QQQKPSLTAQQKAPLTYSSEQQQRHSVFGTAASIANVTAPHHHHHHQHTINGAAASTT
                     RQLSAPAPPPPPPPPPPPQTAPQSIVLMAVNTTTSCITQSNAAGTATTTIATTTKTSN
                     NNNNSHHLYSPQSINFVNATNNGVIGGGAAGSNAANLTMELRNYHPHHHATQQQHPPQ
                     QQQQQQQQHHHHHHYHHNVHNLTSNAAGTASSTTSMLPTQSQGPPPPLPLAPTTSSSS
                     SSSSPASLSFAPPLPSHGNAPPTVSLIMPTHGQQQHLTTAHHQHQHQHQHPHQHQHHN
                     QHRVNPNPIPNPQHQLHHQYHNLSQISHYHQQL"
ORIGIN      
        1 atgaacacac caacacagtc ctcatcatcc acaacatccc tagcagcggc atctgtgcag
       61 gctccaacag ctgctgcagc agcagctaca ggtaataata gtagcattaa caatgcaaca
      121 ggtctgagta atagtagcaa caacaacaac agtggtgtgg ttgttggtgc acctgctcct
      181 ttatatgagg gtccatcgtg tagtaaaaca aatgttcttg cggtggcgaa tgatacgtcg
      241 gtgcgtagtt taaattcacc actttctaca acatcggttt cttcgacctt atctacgaca
      301 cccacaacga catctgctgc ctcatcgtta acagcatcga caggatcatt tgcatttgtc
      361 tatggtaata ccagtggcgg aggagcgagc ggtggtggag ttgggcataa aacttcagct
      421 tccagcagtt cttcgtcagc gatttctagc aacatgcaat tgacaccgtc aagccataat
      481 ggggccagta cttcaggggt ggttgttggg ggcagtgatg gtaccaccat gttatcggat
      541 gcatatcatc atcagcaaat gcaaatacaa ttgcagcaac agtttgagca acactatcag
      601 atacagtttt acgatcaaca aacttacttg cagcaacagc agcagcagca gcagcaacag
      661 caaaagccat cactaacggc ccagcaaaaa gctcctctga cctacagttc cgaacagcaa
      721 caaagacaca gtgtgtttgg tacagcggca agtattgcta atgtgactgc tccgcatcat
      781 catcatcatc accagcatac aattaatggt gctgccgcta gtacgaccag gcagttgtca
      841 gctcctgcgc ctccgccgcc gcctcctcct cccccgccac cacaaacggc tccacaatct
      901 attgtgttaa tggctgtcaa tacaacaaca tcatgtataa cacaatcgaa tgcagctggt
      961 actgcaacga caacgatagc aacaacaaca aaaactagta acaacaacaa taacagtcat
     1021 catttatatt caccacaatc aataaatttc gtcaatgcca caaataatgg tgtgattggt
     1081 ggtggtgctg ctggctctaa tgcagccaat ttaactatgg agttaagaaa ttatcatccc
     1141 catcatcatg caacgcaaca gcaacatcct ccacaacaac aacagcaaca acaacagcaa
     1201 catcatcatc accatcatta tcatcataat gtgcataatt taacatcaaa tgctgctggt
     1261 acagcttcat ctacaacttc aatgttgcca acacaatcac aagggccacc accaccatta
     1321 ccactagcac ccacaacatc atcatcgtcg tcatcatctt cgccagcatc cttgagtttt
     1381 gctcctccgc tgccgtcaca tggcaacgct ccaccaacag tctctcttat tatgccaaca
     1441 catggtcaac agcaacatct aacaacagcc catcatcagc atcagcatca acatcaacat
     1501 ccacatcagc atcagcacca caaccagcat cgtgtaaatc caaatccaat tccaaatccg
     1561 cagcatcagc ttcatcatca atatcacaat ttgtctcaaa tcagccatta ccatcagcaa
     1621 ctttaacaac gtttttatta tatgttcttt ggcttgtaag aattatttcg actacattga
     1681 attcctgtta atctcctcaa tgttcggttt actttcccta gttacggtcg tcattttatt
     1741 ttgcatcttt ggtttcattt gaaaatttcg aaaacaacaa aaattggctt ttaaaaaaga
     1801 aattcatttg tatataatac cttaaaaaaa taacaaaaac ctcaccgact ttaaaattag
     1861 gaattcttga acttgcccag taaacacagg gcatagacaa tggaaaggca ttgactttga
     1921 aactctaaat gttaataaaa taactcaaaa gttctctgtt ccatgtggcc cgggttcctt
     1981 gtgaacgact gagaatatga cacttctgcc atctgttgga gcttttttaa acatatcgtt
     2041 tcgagtctat tgatttcttt tgtctatgct atatgtttgt cctaaccctg agaaacttcc
     2101 ttcccccatc ccataatttc tttgagcacc acagactgac tgaaatttct tatgttgttg
     2161 aactttcgtt gttatgtaaa acgaaaaaga catcatcatc atcttatcat catatatatc
     2221 aatattttta ttgcttactt gttgaaatgt aacatttgat ttctctctct ctctctgttt
     2281 atttatacat tttatatata taattttttt tagaaaatta tataactaaa atttttgttt
     2341 aaatcatcaa acttacacat atacatgcag ttatatgtcc atagttattt attaattgaa
     2401 acaacaaaaa gaaaaattac aaaaaaatac acatacatac ataaatatgg caaaatctaa
     2461 taccttttat ttgcattctt caaaaatgcc caacaaaaac ataagatcca aattcatatt
     2521 tttatgaaac ttcaggaaat aacacttgtt tt